RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 MPNDQ8N594 471 aa7.98□□□□□ -1.13
LSM3P4-201ENST00000502948 GRAPLQ8TC17 118 aaPredicted RBP7.98□□□□□ -1.13
LSM3P4-201ENST00000502948 DPF2Q92785 391 aa7.98□□□□□ -1.13
LSM3P4-201ENST00000502948 RUNDC1Q96C34 613 aa7.98□□□□□ -1.13
LSM3P4-201ENST00000502948 CFAP44Q96MT7 982 aa7.98□□□□□ -1.13
LSM3P4-201ENST00000502948 ISCA1Q9BUE6 129 aa7.98□□□□□ -1.13
LSM3P4-201ENST00000502948 TLL2Q9Y6L7 1015 aa7.98□□□□□ -1.13
LSM3P4-201ENST00000502948 TAF1P21675 1872 aa7.98□□□□□ -1.13
LSM3P4-201ENST00000502948 CA12O43570 354 aa7.97□□□□□ -1.13
LSM3P4-201ENST00000502948 EIF2S2P20042 333 aaKnown RBP7.97□□□□□ -1.13
LSM3P4-201ENST00000502948 PROSER3Q2NL68 480 aa7.97□□□□□ -1.13
LSM3P4-201ENST00000502948 CST9Q5W186 159 aa7.97□□□□□ -1.13
LSM3P4-201ENST00000502948 CIAPIN1Q6FI81 312 aa7.97□□□□□ -1.13
LSM3P4-201ENST00000502948 DPP8Q6V1X1 898 aaPredicted RBP7.97□□□□□ -1.13
LSM3P4-201ENST00000502948 ANKRD13DQ6ZTN6 518 aa7.97□□□□□ -1.13
LSM3P4-201ENST00000502948 DDX46Q7L014 1031 aaKnown RBP7.97□□□□□ -1.13
LSM3P4-201ENST00000502948 XAGE3Q8WTP9 111 aa7.97□□□□□ -1.13
LSM3P4-201ENST00000502948 HYPKQ9NX55 129 aa7.97□□□□□ -1.13
LSM3P4-201ENST00000502948 TRMT112Q9UI30 125 aaKnown RBP7.97□□□□□ -1.13
LSM3P4-201ENST00000502948 TRIM35Q9UPQ4 493 aa7.97□□□□□ -1.13
LSM3P4-201ENST00000502948 GJA3Q9Y6H8 435 aa7.97□□□□□ -1.13
LSM3P4-201ENST00000502948 ZNF853P0CG23 659 aa7.96□□□□□ -1.14
LSM3P4-201ENST00000502948 RPS12P25398 132 aaKnown RBP7.96□□□□□ -1.14
LSM3P4-201ENST00000502948 AOC3Q16853 763 aa7.96□□□□□ -1.14
LSM3P4-201ENST00000502948 SAPCD2Q86UD0 394 aa7.96□□□□□ -1.14
LSM3P4-201ENST00000502948 NECTIN2Q92692 538 aa7.96□□□□□ -1.14
LSM3P4-201ENST00000502948 PODXL2Q9NZ53 605 aa7.96□□□□□ -1.14
LSM3P4-201ENST00000502948 CACNA1FO60840 1977 aa7.96□□□□□ -1.14
LSM3P4-201ENST00000502948 HSPA8P11142 646 aaKnown RBP7.95□□□□□ -1.14
LSM3P4-201ENST00000502948 CALD1Q05682 793 aaKnown RBP7.95□□□□□ -1.14
LSM3P4-201ENST00000502948 NCBP3Q53F19 620 aaKnown RBP7.95□□□□□ -1.14
LSM3P4-201ENST00000502948 HDGFL1Q5TGJ6 251 aa7.95□□□□□ -1.14
LSM3P4-201ENST00000502948 CDC37L1Q7L3B6 337 aa7.95□□□□□ -1.14
LSM3P4-201ENST00000502948 CAPNS2Q96L46 248 aa7.95□□□□□ -1.14
LSM3P4-201ENST00000502948 GPR101Q96P66 508 aaPredicted RBP7.95□□□□□ -1.14
LSM3P4-201ENST00000502948 ABT1Q9ULW3 272 aaKnown RBP7.95□□□□□ -1.14
LSM3P4-201ENST00000502948 MYH3P11055 1940 aa7.95□□□□□ -1.14
LSM3P4-201ENST00000502948 POLR2AP24928 1970 aaKnown RBP7.95□□□□□ -1.14
LSM3P4-201ENST00000502948 YDJCA8MPS7 323 aa7.94□□□□□ -1.14
LSM3P4-201ENST00000502948 H7C1D1 291 aa7.94□□□□□ -1.14
LSM3P4-201ENST00000502948 ANXA1P04083 346 aa7.94□□□□□ -1.14
LSM3P4-201ENST00000502948 GMPSP49915 693 aaPredicted RBP7.94□□□□□ -1.14
LSM3P4-201ENST00000502948 MMP14P50281 582 aa7.94□□□□□ -1.14
LSM3P4-201ENST00000502948 LBX1P52954 281 aa7.94□□□□□ -1.14
LSM3P4-201ENST00000502948 BRPF1P55201 1214 aaPredicted RBP7.94□□□□□ -1.14
LSM3P4-201ENST00000502948 ZBTB38Q8NAP3 1195 aaPredicted RBP7.94□□□□□ -1.14
LSM3P4-201ENST00000502948 EYA3Q99504 573 aa7.94□□□□□ -1.14
LSM3P4-201ENST00000502948 BEGAINQ9BUH8 593 aa7.94□□□□□ -1.14
LSM3P4-201ENST00000502948 IFT57Q9NWB7 429 aa7.94□□□□□ -1.14
LSM3P4-201ENST00000502948 CHPF2Q9P2E5 772 aa7.94□□□□□ -1.14
LSM3P4-201ENST00000502948 SCN9AQ15858 1988 aa7.93□□□□□ -1.14
LSM3P4-201ENST00000502948 HCLS1P14317 486 aaPredicted RBP7.93□□□□□ -1.14
LSM3P4-201ENST00000502948 RGS19P49795 217 aa7.93□□□□□ -1.14
LSM3P4-201ENST00000502948 HIRAP54198 1017 aaPredicted RBP7.93□□□□□ -1.14
LSM3P4-201ENST00000502948 GNAI1P63096 354 aa7.93□□□□□ -1.14
LSM3P4-201ENST00000502948 AIMP1Q12904 312 aaKnown RBP7.93□□□□□ -1.14
LSM3P4-201ENST00000502948 WDR43Q15061 677 aaKnown RBP eCLIP7.93□□□□□ -1.14
LSM3P4-201ENST00000502948 WASHC4Q2M389 1173 aa7.93□□□□□ -1.14
LSM3P4-201ENST00000502948 DUSP27Q5VZP5 1158 aa7.93□□□□□ -1.14
LSM3P4-201ENST00000502948 CCDC191Q8NCU4 936 aa7.93□□□□□ -1.14
LSM3P4-201ENST00000502948 BCL2L13Q9BXK5 485 aa7.93□□□□□ -1.14
LSM3P4-201ENST00000502948 CNOT7Q9UIV1 285 aaKnown RBP7.93□□□□□ -1.14
LSM3P4-201ENST00000502948 ADAMTS8Q9UP79 889 aa7.93□□□□□ -1.14
LSM3P4-201ENST00000502948 AKAP11Q9UKA4 1901 aa7.92□□□□□ -1.14
LSM3P4-201ENST00000502948 TCERG1O14776 1098 aaKnown RBP7.92□□□□□ -1.14
LSM3P4-201ENST00000502948 RPS8P62241 208 aaKnown RBP7.92□□□□□ -1.14
LSM3P4-201ENST00000502948 NOGQ13253 232 aa7.92□□□□□ -1.14
LSM3P4-201ENST00000502948 REM2Q8IYK8 340 aaPredicted RBP7.92□□□□□ -1.14
LSM3P4-201ENST00000502948 CELF1Q92879 486 aaKnown RBP7.92□□□□□ -1.14
LSM3P4-201ENST00000502948 FAM89AQ96GI7 184 aa7.92□□□□□ -1.14
LSM3P4-201ENST00000502948 PRKRIP1Q9H875 184 aaPredicted RBP7.92□□□□□ -1.14
LSM3P4-201ENST00000502948 MBIPQ9NS73 344 aa7.92□□□□□ -1.14
LSM3P4-201ENST00000502948 POLLQ9UGP5 575 aa7.92□□□□□ -1.14
LSM3P4-201ENST00000502948 NSFL1CQ9UNZ2 370 aaKnown RBP7.92□□□□□ -1.14
LSM3P4-201ENST00000502948 ZNF646O15015 1829 aaPredicted RBP7.92□□□□□ -1.14
LSM3P4-201ENST00000502948 TRAF5O00463 557 aa7.91□□□□□ -1.14
LSM3P4-201ENST00000502948 IRS4O14654 1257 aaPredicted RBP7.91□□□□□ -1.14
LSM3P4-201ENST00000502948 CAPN15O75808 1086 aa7.91□□□□□ -1.14
LSM3P4-201ENST00000502948 CELF2O95319 508 aaKnown RBP7.91□□□□□ -1.14
LSM3P4-201ENST00000502948 PCCAP05165 728 aaPredicted RBP7.91□□□□□ -1.14
LSM3P4-201ENST00000502948 VIL1P09327 827 aaKnown RBP7.91□□□□□ -1.14
LSM3P4-201ENST00000502948 GOLGA2Q08379 1002 aa7.91□□□□□ -1.14
LSM3P4-201ENST00000502948 CCDC27Q2M243 656 aa7.91□□□□□ -1.14
LSM3P4-201ENST00000502948 KRT24Q2M2I5 525 aa7.91□□□□□ -1.14
LSM3P4-201ENST00000502948 CYP4F22Q6NT55 531 aa7.91□□□□□ -1.14
LSM3P4-201ENST00000502948 SLC51AQ86UW1 340 aa7.91□□□□□ -1.14
LSM3P4-201ENST00000502948 MICALL2Q8IY33 904 aa7.91□□□□□ -1.14
LSM3P4-201ENST00000502948 AGBL3Q8NEM8 1001 aa7.91□□□□□ -1.14
LSM3P4-201ENST00000502948 TBC1D16Q8TBP0 767 aa7.91□□□□□ -1.14
LSM3P4-201ENST00000502948 ABHD8Q96I13 439 aa7.91□□□□□ -1.14
LSM3P4-201ENST00000502948 GLIS2Q9BZE0 524 aaPredicted RBP7.91□□□□□ -1.14
LSM3P4-201ENST00000502948 SAGE1Q9NXZ1 904 aa7.91□□□□□ -1.14
LSM3P4-201ENST00000502948 RTL9Q8NET4 1388 aa7.91□□□□□ -1.14
LSM3P4-201ENST00000502948 COL4A1P02462 1669 aa7.91□□□□□ -1.14
LSM3P4-201ENST00000502948 LAMB1P07942 1786 aa7.9□□□□□ -1.14
LSM3P4-201ENST00000502948 PITPNM2Q9BZ72 1349 aa7.9□□□□□ -1.14
LSM3P4-201ENST00000502948 PSMD14O00487 310 aa7.9□□□□□ -1.14
LSM3P4-201ENST00000502948 ECE2O60344 883 aa7.9□□□□□ -1.14
LSM3P4-201ENST00000502948 PDE8AO60658 829 aa7.9□□□□□ -1.14
LSM3P4-201ENST00000502948 RAD17O75943 681 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms