RNA–Protein interactions for RNA: ENST00000502639.1

CDC42SE2-204, Transcript of CDC42 small effector 2, humanhuman

TSL 3

Gene CDC42SE2, Length 494 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-204ENST00000502639 FAM13BQ9NYF5 915 aa7.79□□□□□ -1.16
CDC42SE2-204ENST00000502639 BRPF3Q9ULD4 1205 aa7.79□□□□□ -1.16
CDC42SE2-204ENST00000502639 NFKB1P19838 968 aa7.78□□□□□ -1.16
CDC42SE2-204ENST00000502639 C1orf229Q6ZS94 237 aaPredicted RBP7.78□□□□□ -1.16
CDC42SE2-204ENST00000502639 SYT9Q86SS6 491 aa7.78□□□□□ -1.16
CDC42SE2-204ENST00000502639 BHMTQ93088 406 aa7.78□□□□□ -1.16
CDC42SE2-204ENST00000502639 FAM129BQ96TA1 746 aa7.78□□□□□ -1.16
CDC42SE2-204ENST00000502639 MDFIQ99750 246 aa7.78□□□□□ -1.16
CDC42SE2-204ENST00000502639 RBCK1Q9BYM8 510 aa7.78□□□□□ -1.16
CDC42SE2-204ENST00000502639 TMEM63CQ9P1W3 806 aa7.78□□□□□ -1.16
CDC42SE2-204ENST00000502639 DCTN4Q9UJW0 460 aa7.78□□□□□ -1.16
CDC42SE2-204ENST00000502639 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.78□□□□□ -1.16
CDC42SE2-204ENST00000502639 ITGB2P05107 769 aa7.77□□□□□ -1.17
CDC42SE2-204ENST00000502639 C8orf34Q49A92 452 aa7.77□□□□□ -1.17
CDC42SE2-204ENST00000502639 KANK3Q6NY19 840 aa7.77□□□□□ -1.17
CDC42SE2-204ENST00000502639 XKR5Q6UX68 686 aa7.77□□□□□ -1.17
CDC42SE2-204ENST00000502639 TMC7Q7Z402 723 aa7.77□□□□□ -1.17
CDC42SE2-204ENST00000502639 PRR12Q9ULL5 1215 aa7.77□□□□□ -1.17
CDC42SE2-204ENST00000502639 GTF3C5Q9Y5Q8 519 aaPredicted RBP7.77□□□□□ -1.17
CDC42SE2-204ENST00000502639 GPR182O15218 404 aa7.76□□□□□ -1.17
CDC42SE2-204ENST00000502639 NDUFB5O43674 189 aa7.76□□□□□ -1.17
CDC42SE2-204ENST00000502639 ARAFP10398 606 aa7.76□□□□□ -1.17
CDC42SE2-204ENST00000502639 MAPK1P28482 360 aa7.76□□□□□ -1.17
CDC42SE2-204ENST00000502639 MAP2K3P46734 347 aa7.76□□□□□ -1.17
CDC42SE2-204ENST00000502639 DNAJC14Q6Y2X3 702 aaPredicted RBP7.76□□□□□ -1.17
CDC42SE2-204ENST00000502639 FCHSD1Q86WN1 690 aa7.76□□□□□ -1.17
CDC42SE2-204ENST00000502639 ELP3Q9H9T3 547 aa7.76□□□□□ -1.17
CDC42SE2-204ENST00000502639 CNTN3Q9P232 1028 aa7.76□□□□□ -1.17
CDC42SE2-204ENST00000502639 NEURL1BA8MQ27 555 aa7.75□□□□□ -1.17
CDC42SE2-204ENST00000502639 MMP20O60882 483 aa7.75□□□□□ -1.17
CDC42SE2-204ENST00000502639 MAP3K6O95382 1288 aa7.75□□□□□ -1.17
CDC42SE2-204ENST00000502639 NLRP13Q86W25 1043 aa7.75□□□□□ -1.17
CDC42SE2-204ENST00000502639 SCARF2Q96GP6 870 aaPredicted RBP7.75□□□□□ -1.17
CDC42SE2-204ENST00000502639 CITED4Q96RK1 184 aa7.75□□□□□ -1.17
CDC42SE2-204ENST00000502639 OXCT2Q9BYC2 517 aaPredicted RBP7.75□□□□□ -1.17
CDC42SE2-204ENST00000502639 GGA1Q9UJY5 639 aa7.75□□□□□ -1.17
CDC42SE2-204ENST00000502639 ZBTB42B2RXF5 422 aa7.74□□□□□ -1.17
CDC42SE2-204ENST00000502639 SIN3BO75182 1162 aa7.74□□□□□ -1.17
CDC42SE2-204ENST00000502639 CYP2E1P05181 493 aaPredicted RBP7.74□□□□□ -1.17
CDC42SE2-204ENST00000502639 CELA2BP08218 269 aaPredicted RBP7.74□□□□□ -1.17
CDC42SE2-204ENST00000502639 RARAP10276 462 aa7.74□□□□□ -1.17
CDC42SE2-204ENST00000502639 USP5P45974 858 aa7.74□□□□□ -1.17
CDC42SE2-204ENST00000502639 PDE12Q6L8Q7 609 aaKnown RBP7.74□□□□□ -1.17
CDC42SE2-204ENST00000502639 CHRDQ9H2X0 955 aa7.74□□□□□ -1.17
CDC42SE2-204ENST00000502639 AVENQ9NQS1 362 aaPredicted RBP7.74□□□□□ -1.17
CDC42SE2-204ENST00000502639 FOXD3Q9UJU5 478 aaPredicted RBP7.74□□□□□ -1.17
CDC42SE2-204ENST00000502639 NSFL1CQ9UNZ2 370 aaKnown RBP7.74□□□□□ -1.17
CDC42SE2-204ENST00000502639 FNDC3AQ9Y2H6 1198 aaKnown RBP7.74□□□□□ -1.17
CDC42SE2-204ENST00000502639 TNFRSF21O75509 655 aa7.73□□□□□ -1.17
CDC42SE2-204ENST00000502639 RPLP1P05386 114 aaKnown RBP7.73□□□□□ -1.17
CDC42SE2-204ENST00000502639 PCSK2P16519 638 aa7.73□□□□□ -1.17
CDC42SE2-204ENST00000502639 DSC3Q14574 896 aa7.73□□□□□ -1.17
CDC42SE2-204ENST00000502639 PLA2G4EQ3MJ16 856 aa7.73□□□□□ -1.17
CDC42SE2-204ENST00000502639 COL13A1Q5TAT6 717 aaPredicted RBP7.73□□□□□ -1.17
CDC42SE2-204ENST00000502639 ZNF438Q7Z4V0 828 aa7.73□□□□□ -1.17
CDC42SE2-204ENST00000502639 ASB16Q96NS5 453 aa7.73□□□□□ -1.17
CDC42SE2-204ENST00000502639 PNMA5Q96PV4 448 aa7.73□□□□□ -1.17
CDC42SE2-204ENST00000502639 EFCC1Q9HA90 598 aa7.73□□□□□ -1.17
CDC42SE2-204ENST00000502639 TLR7Q9NYK1 1049 aaKnown RBP7.73□□□□□ -1.17
CDC42SE2-204ENST00000502639 ADAM23O75077 832 aa7.72□□□□□ -1.17
CDC42SE2-204ENST00000502639 ADH6P28332 368 aa7.72□□□□□ -1.17
CDC42SE2-204ENST00000502639 CCDC27Q2M243 656 aa7.72□□□□□ -1.17
CDC42SE2-204ENST00000502639 TMCO4Q5TGY1 634 aa7.72□□□□□ -1.17
CDC42SE2-204ENST00000502639 C1orf127Q8N9H9 656 aa7.72□□□□□ -1.17
CDC42SE2-204ENST00000502639 TNFRSF25Q93038 417 aa7.72□□□□□ -1.17
CDC42SE2-204ENST00000502639 NIF3L1Q9GZT8 377 aa7.72□□□□□ -1.17
CDC42SE2-204ENST00000502639 ABI2Q9NYB9 513 aaPredicted RBP7.72□□□□□ -1.17
CDC42SE2-204ENST00000502639 CNTNAP5Q8WYK1 1306 aa7.72□□□□□ -1.17
CDC42SE2-204ENST00000502639 ADARB2-AS1A8MUL3 147 aa7.71□□□□□ -1.18
CDC42SE2-204ENST00000502639 SHISA8B8ZZ34 492 aa7.71□□□□□ -1.18
CDC42SE2-204ENST00000502639 TREHO43280 583 aa7.71□□□□□ -1.18
CDC42SE2-204ENST00000502639 ORC1Q13415 861 aa7.71□□□□□ -1.18
CDC42SE2-204ENST00000502639 SLCO4C1Q6ZQN7 724 aa7.71□□□□□ -1.18
CDC42SE2-204ENST00000502639 DHX32Q7L7V1 743 aaKnown RBP7.71□□□□□ -1.18
CDC42SE2-204ENST00000502639 OR13H1Q8NG92 308 aa7.71□□□□□ -1.18
CDC42SE2-204ENST00000502639 OIP5O43482 229 aa7.7□□□□□ -1.18
CDC42SE2-204ENST00000502639 EPXP11678 715 aa7.7□□□□□ -1.18
CDC42SE2-204ENST00000502639 HOXD8P13378 290 aaPredicted RBP7.7□□□□□ -1.18
CDC42SE2-204ENST00000502639 MLLT1Q03111 559 aaPredicted RBP7.7□□□□□ -1.18
CDC42SE2-204ENST00000502639 EHHADHQ08426 723 aa7.7□□□□□ -1.18
CDC42SE2-204ENST00000502639 PDE3BQ13370 1112 aa7.7□□□□□ -1.18
CDC42SE2-204ENST00000502639 USPL1Q5W0Q7 1092 aa7.7□□□□□ -1.18
CDC42SE2-204ENST00000502639 GOLGA6L1Q8N7Z2 621 aa7.7□□□□□ -1.18
CDC42SE2-204ENST00000502639 TRPM4Q8TD43 1214 aa7.7□□□□□ -1.18
CDC42SE2-204ENST00000502639 TMC1Q8TDI8 760 aa7.7□□□□□ -1.18
CDC42SE2-204ENST00000502639 ALKBH8Q96BT7 664 aaKnown RBP7.7□□□□□ -1.18
CDC42SE2-204ENST00000502639 DCAF5Q96JK2 942 aa7.7□□□□□ -1.18
CDC42SE2-204ENST00000502639 SPOCK3Q9BQ16 436 aa7.7□□□□□ -1.18
CDC42SE2-204ENST00000502639 IGFLR1Q9H665 355 aa7.7□□□□□ -1.18
CDC42SE2-204ENST00000502639 DNAJB12Q9NXW2 375 aaKnown RBP7.7□□□□□ -1.18
CDC42SE2-204ENST00000502639 ANKRD33BA6NCL7 494 aa7.69□□□□□ -1.18
CDC42SE2-204ENST00000502639 BCRP11274 1271 aa7.69□□□□□ -1.18
CDC42SE2-204ENST00000502639 MFAP1P55081 439 aaKnown RBP7.69□□□□□ -1.18
CDC42SE2-204ENST00000502639 DMRTB1Q96MA1 342 aa7.69□□□□□ -1.18
CDC42SE2-204ENST00000502639 ZFYVE28Q9HCC9 887 aa7.69□□□□□ -1.18
CDC42SE2-204ENST00000502639 GDF2Q9UK05 429 aaPredicted RBP7.69□□□□□ -1.18
CDC42SE2-204ENST00000502639 NAGPAQ9UK23 515 aa7.69□□□□□ -1.18
CDC42SE2-204ENST00000502639 STARD13Q9Y3M8 1113 aa7.69□□□□□ -1.18
CDC42SE2-204ENST00000502639 MSTNO14793 375 aa7.68□□□□□ -1.18
CDC42SE2-204ENST00000502639 EREGO14944 169 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms