RNA–Protein interactions for RNA: ENST00000502527.2

VCAN-204, Transcript of versican, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene VCAN, Length 2,087 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-204ENST00000502527 LAMB4A4D0S4 1761 aa19.8■□□□□ 0.76
VCAN-204ENST00000502527 GLI3P10071 1580 aa19.79■□□□□ 0.76
VCAN-204ENST00000502527 TAF5LO75529 589 aa19.79■□□□□ 0.76
VCAN-204ENST00000502527 LMBR1LQ6UX01 489 aa19.79■□□□□ 0.76
VCAN-204ENST00000502527 TPCN1Q9ULQ1 816 aa19.79■□□□□ 0.76
VCAN-204ENST00000502527 ZNF589Q86UQ0 364 aaPredicted RBP19.79■□□□□ 0.76
VCAN-204ENST00000502527 ZSCAN30Q86W11 494 aa19.79■□□□□ 0.76
VCAN-204ENST00000502527 DDX54Q8TDD1 881 aaKnown RBP19.79■□□□□ 0.76
VCAN-204ENST00000502527 AFDNP55196 1824 aaKnown RBP19.79■□□□□ 0.76
VCAN-204ENST00000502527 RPS6KB1P23443 525 aa19.78■□□□□ 0.76
VCAN-204ENST00000502527 UBE2HP62256 183 aa19.78■□□□□ 0.76
VCAN-204ENST00000502527 EDC3Q96F86 508 aaKnown RBP19.78■□□□□ 0.76
VCAN-204ENST00000502527 HAUS7Q99871 368 aa19.78■□□□□ 0.76
VCAN-204ENST00000502527 CWC25Q9NXE8 425 aaPredicted RBP19.78■□□□□ 0.76
VCAN-204ENST00000502527 MTMR6Q9Y217 621 aa19.78■□□□□ 0.76
VCAN-204ENST00000502527 FOXO4P98177 505 aa19.77■□□□□ 0.76
VCAN-204ENST00000502527 KRT32Q14532 448 aa19.77■□□□□ 0.76
VCAN-204ENST00000502527 NKX1-1Q15270 411 aaPredicted RBP19.77■□□□□ 0.76
VCAN-204ENST00000502527 USPL1Q5W0Q7 1092 aa19.77■□□□□ 0.76
VCAN-204ENST00000502527 DBNDD2Q9BQY9 259 aa19.77■□□□□ 0.76
VCAN-204ENST00000502527 ST3GAL1Q11201 340 aa19.77■□□□□ 0.75
VCAN-204ENST00000502527 NECAB1Q8N987 351 aa19.77■□□□□ 0.75
VCAN-204ENST00000502527 LETM1O95202 739 aaPredicted RBP19.76■□□□□ 0.75
VCAN-204ENST00000502527 CCDC183Q5T5S1 534 aa19.76■□□□□ 0.75
VCAN-204ENST00000502527 DNAJC2Q99543 621 aaKnown RBP19.76■□□□□ 0.75
VCAN-204ENST00000502527 TTLL7Q6ZT98 887 aa19.75■□□□□ 0.75
VCAN-204ENST00000502527 CHMP3Q9Y3E7 222 aa19.75■□□□□ 0.75
VCAN-204ENST00000502527 IL2RBP14784 551 aa19.75■□□□□ 0.75
VCAN-204ENST00000502527 PDCP20941 246 aa19.75■□□□□ 0.75
VCAN-204ENST00000502527 U3KPZ7 1027 aaPredicted RBP19.75■□□□□ 0.75
VCAN-204ENST00000502527 CCDC191Q8NCU4 936 aa19.74■□□□□ 0.75
VCAN-204ENST00000502527 CARD10Q9BWT7 1032 aa19.74■□□□□ 0.75
VCAN-204ENST00000502527 GPR108Q9NPR9 543 aa19.74■□□□□ 0.75
VCAN-204ENST00000502527 COL5A2P05997 1499 aaPredicted RBP19.74■□□□□ 0.75
VCAN-204ENST00000502527 SOS2Q07890 1332 aaPredicted RBP19.74■□□□□ 0.75
VCAN-204ENST00000502527 VPS37CA5D8V6 355 aaPredicted RBP19.74■□□□□ 0.75
VCAN-204ENST00000502527 FIBPO43427 364 aa19.74■□□□□ 0.75
VCAN-204ENST00000502527 A1BGP04217 495 aa19.74■□□□□ 0.75
VCAN-204ENST00000502527 HSPA2P54652 639 aa19.74■□□□□ 0.75
VCAN-204ENST00000502527 MCMDC2Q4G0Z9 681 aa19.74■□□□□ 0.75
VCAN-204ENST00000502527 LARP1BQ659C4 914 aaKnown RBP19.74■□□□□ 0.75
VCAN-204ENST00000502527 TICAM2Q86XR7 235 aa19.74■□□□□ 0.75
VCAN-204ENST00000502527 MSNP26038 577 aaKnown RBP19.73■□□□□ 0.75
VCAN-204ENST00000502527 IL15P40933 162 aaPredicted RBP19.73■□□□□ 0.75
VCAN-204ENST00000502527 KLHL34Q8N239 644 aa19.73■□□□□ 0.75
VCAN-204ENST00000502527 RNF214Q8ND24 703 aa19.73■□□□□ 0.75
VCAN-204ENST00000502527 TAF6LQ9Y6J9 622 aa19.73■□□□□ 0.75
VCAN-204ENST00000502527 TOB2Q14106 344 aaPredicted RBP19.72■□□□□ 0.75
VCAN-204ENST00000502527 ATG9AQ7Z3C6 839 aa19.72■□□□□ 0.75
VCAN-204ENST00000502527 KBTBD3Q8NAB2 608 aa19.72■□□□□ 0.75
VCAN-204ENST00000502527 FAM184AQ8NB25 1140 aa19.72■□□□□ 0.75
VCAN-204ENST00000502527 KCPQ6ZWJ8 1503 aa19.72■□□□□ 0.75
VCAN-204ENST00000502527 ZNF609O15014 1411 aa19.72■□□□□ 0.75
VCAN-204ENST00000502527 DNM1Q05193 864 aaKnown RBP19.72■□□□□ 0.75
VCAN-204ENST00000502527 COL9A3Q14050 684 aaPredicted RBP19.71■□□□□ 0.75
VCAN-204ENST00000502527 DDX46Q7L014 1031 aaKnown RBP19.71■□□□□ 0.75
VCAN-204ENST00000502527 TCEANC2Q96MN5 208 aa19.71■□□□□ 0.75
VCAN-204ENST00000502527 NEUROD6Q96NK8 337 aa19.71■□□□□ 0.75
VCAN-204ENST00000502527 NAP1L5Q96NT1 182 aaPredicted RBP19.71■□□□□ 0.75
VCAN-204ENST00000502527 NEK1Q96PY6 1258 aa19.71■□□□□ 0.75
VCAN-204ENST00000502527 NDUFB9Q9Y6M9 179 aa19.71■□□□□ 0.75
VCAN-204ENST00000502527 UBR2Q8IWV8 1755 aa19.71■□□□□ 0.75
VCAN-204ENST00000502527 ZBTB3Q9H5J0 574 aa19.71■□□□□ 0.75
VCAN-204ENST00000502527 ATG3Q9NT62 314 aa19.71■□□□□ 0.75
VCAN-204ENST00000502527 SLAIN2Q9P270 581 aa19.71■□□□□ 0.75
VCAN-204ENST00000502527 SH3TC1Q8TE82 1336 aa19.7■□□□□ 0.74
VCAN-204ENST00000502527 NOL7Q9UMY1 257 aaKnown RBP19.7■□□□□ 0.74
VCAN-204ENST00000502527 EYA2O00167 538 aa19.69■□□□□ 0.74
VCAN-204ENST00000502527 UVSSAQ2YD98 709 aa19.69■□□□□ 0.74
VCAN-204ENST00000502527 TNS2Q63HR2 1409 aa19.69■□□□□ 0.74
VCAN-204ENST00000502527 PALLDQ8WX93 1383 aa19.69■□□□□ 0.74
VCAN-204ENST00000502527 CIAO1O76071 339 aa19.69■□□□□ 0.74
VCAN-204ENST00000502527 CCDC129Q6ZRS4 1044 aa19.69■□□□□ 0.74
VCAN-204ENST00000502527 SEC62Q99442 399 aaKnown RBP19.69■□□□□ 0.74
VCAN-204ENST00000502527 HELLSQ9NRZ9 838 aa19.69■□□□□ 0.74
VCAN-204ENST00000502527 PAG1Q9NWQ8 432 aa19.69■□□□□ 0.74
VCAN-204ENST00000502527 NUP188Q5SRE5 1749 aa19.68■□□□□ 0.74
VCAN-204ENST00000502527 DTNBO60941 627 aa19.68■□□□□ 0.74
VCAN-204ENST00000502527 CCDC39Q9UFE4 941 aa19.68■□□□□ 0.74
VCAN-204ENST00000502527 PAPPAQ13219 1627 aa19.68■□□□□ 0.74
VCAN-204ENST00000502527 XIRP1Q702N8 1843 aaKnown RBP19.68■□□□□ 0.74
VCAN-204ENST00000502527 TCHHQ07283 1943 aa19.68■□□□□ 0.74
VCAN-204ENST00000502527 EVA1CP58658 441 aa19.67■□□□□ 0.74
VCAN-204ENST00000502527 KRT85P78386 507 aa19.67■□□□□ 0.74
VCAN-204ENST00000502527 GOLIM4O00461 696 aa19.67■□□□□ 0.74
VCAN-204ENST00000502527 CYP21A2P08686 494 aa19.67■□□□□ 0.74
VCAN-204ENST00000502527 TIMM10P62072 90 aa19.67■□□□□ 0.74
VCAN-204ENST00000502527 CCDC9Q9Y3X0 531 aaKnown RBP19.67■□□□□ 0.74
VCAN-204ENST00000502527 HMGB1P09429 215 aaKnown RBP19.66■□□□□ 0.74
VCAN-204ENST00000502527 MCM5P33992 734 aa19.66■□□□□ 0.74
VCAN-204ENST00000502527 CDC37L1Q7L3B6 337 aa19.66■□□□□ 0.74
VCAN-204ENST00000502527 STRN4Q9NRL3 753 aa19.66■□□□□ 0.74
VCAN-204ENST00000502527 CHGBP05060 677 aa19.66■□□□□ 0.74
VCAN-204ENST00000502527 STK3Q13188 491 aa19.66■□□□□ 0.74
VCAN-204ENST00000502527 GTF3C6Q969F1 213 aa19.66■□□□□ 0.74
VCAN-204ENST00000502527 ISCA1Q9BUE6 129 aa19.66■□□□□ 0.74
VCAN-204ENST00000502527 TMOD3Q9NYL9 352 aa19.66■□□□□ 0.74
VCAN-204ENST00000502527 TJP1Q07157 1748 aa19.65■□□□□ 0.74
VCAN-204ENST00000502527 TCIRG1Q13488 830 aa19.65■□□□□ 0.74
VCAN-204ENST00000502527 TPRNQ4KMQ1 711 aa19.65■□□□□ 0.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms