RNA–Protein interactions for RNA: ENST00000502342.1

SMAD1-203, Transcript of SMAD family member 1, humanhuman

TSL 3

Gene SMAD1, Length 262 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-203ENST00000502342 UBAP1LF5GYI3 381 aa4.81□□□□□ -1.64
SMAD1-203ENST00000502342 J3QW42 95 aa4.81□□□□□ -1.64
SMAD1-203ENST00000502342 M0R082 166 aa4.81□□□□□ -1.64
SMAD1-203ENST00000502342 CPB1P15086 417 aa4.81□□□□□ -1.64
SMAD1-203ENST00000502342 DNM1Q05193 864 aaKnown RBP4.81□□□□□ -1.64
SMAD1-203ENST00000502342 PDE4CQ08493 712 aa4.81□□□□□ -1.64
SMAD1-203ENST00000502342 NOM1Q5C9Z4 860 aaKnown RBP4.81□□□□□ -1.64
SMAD1-203ENST00000502342 MICALL1Q8N3F8 863 aa4.81□□□□□ -1.64
SMAD1-203ENST00000502342 ZNF417Q8TAU3 575 aa4.81□□□□□ -1.64
SMAD1-203ENST00000502342 TNFRSF25Q93038 417 aa4.81□□□□□ -1.64
SMAD1-203ENST00000502342 ZNF587Q96SQ5 575 aaPredicted RBP4.81□□□□□ -1.64
SMAD1-203ENST00000502342 MTMR7Q9Y216 660 aa4.81□□□□□ -1.64
SMAD1-203ENST00000502342 A6NHS1 94 aa4.8□□□□□ -1.64
SMAD1-203ENST00000502342 RNF225M0QZC1 329 aaPredicted RBP4.8□□□□□ -1.64
SMAD1-203ENST00000502342 MMP20O60882 483 aa4.8□□□□□ -1.64
SMAD1-203ENST00000502342 ALBP02768 609 aa4.8□□□□□ -1.64
SMAD1-203ENST00000502342 MPSTP25325 297 aa4.8□□□□□ -1.64
SMAD1-203ENST00000502342 ZNF211Q13398 564 aaPredicted RBP4.8□□□□□ -1.64
SMAD1-203ENST00000502342 TRIP4Q15650 581 aaPredicted RBP4.8□□□□□ -1.64
SMAD1-203ENST00000502342 DHX32Q7L7V1 743 aaKnown RBP4.8□□□□□ -1.64
SMAD1-203ENST00000502342 FAM35AQ86V20 835 aa4.8□□□□□ -1.64
SMAD1-203ENST00000502342 ABTB2Q8N961 1025 aa4.8□□□□□ -1.64
SMAD1-203ENST00000502342 HELQQ8TDG4 1101 aa4.8□□□□□ -1.64
SMAD1-203ENST00000502342 EDEM1Q92611 657 aa4.8□□□□□ -1.64
SMAD1-203ENST00000502342 NUDT16Q96DE0 195 aaKnown RBP4.8□□□□□ -1.64
SMAD1-203ENST00000502342 MDFIQ99750 246 aa4.8□□□□□ -1.64
SMAD1-203ENST00000502342 PLVAPQ9BX97 442 aa4.8□□□□□ -1.64
SMAD1-203ENST00000502342 SLC6A14Q9UN76 642 aa4.8□□□□□ -1.64
SMAD1-203ENST00000502342 USTQ9Y2C2 406 aa4.8□□□□□ -1.64
SMAD1-203ENST00000502342 COL8A1P27658 744 aa4.79□□□□□ -1.64
SMAD1-203ENST00000502342 EIF1AXP47813 144 aaKnown RBP4.79□□□□□ -1.64
SMAD1-203ENST00000502342 DGKGP49619 791 aa4.79□□□□□ -1.64
SMAD1-203ENST00000502342 FKBP4Q02790 459 aaKnown RBP eCLIP4.79□□□□□ -1.64
SMAD1-203ENST00000502342 C8orf34Q49A92 452 aa4.79□□□□□ -1.64
SMAD1-203ENST00000502342 B4GALNT3Q6L9W6 998 aa4.79□□□□□ -1.64
SMAD1-203ENST00000502342 PSAPL1Q6NUJ1 521 aa4.79□□□□□ -1.64
SMAD1-203ENST00000502342 KANK3Q6NY19 840 aa4.79□□□□□ -1.64
SMAD1-203ENST00000502342 GGNBP2Q9H3C7 697 aa4.79□□□□□ -1.64
SMAD1-203ENST00000502342 EFCC1Q9HA90 598 aa4.79□□□□□ -1.64
SMAD1-203ENST00000502342 FAM13BQ9NYF5 915 aa4.79□□□□□ -1.64
SMAD1-203ENST00000502342 TLR7Q9NYK1 1049 aaKnown RBP4.79□□□□□ -1.64
SMAD1-203ENST00000502342 FAM229AH3BQW9 127 aa4.78□□□□□ -1.64
SMAD1-203ENST00000502342 RGS9O75916 674 aaPredicted RBP4.78□□□□□ -1.64
SMAD1-203ENST00000502342 MAP3K6O95382 1288 aa4.78□□□□□ -1.64
SMAD1-203ENST00000502342 EGFRP00533 1210 aa4.78□□□□□ -1.64
SMAD1-203ENST00000502342 PSAPP07602 524 aa4.78□□□□□ -1.64
SMAD1-203ENST00000502342 ARID4AP29374 1257 aaPredicted RBP4.78□□□□□ -1.64
SMAD1-203ENST00000502342 SERPINB4P48594 390 aa4.78□□□□□ -1.64
SMAD1-203ENST00000502342 PLAURQ03405 335 aa4.78□□□□□ -1.64
SMAD1-203ENST00000502342 TRAPPC3LQ5T215 181 aa4.78□□□□□ -1.64
SMAD1-203ENST00000502342 TTC39BQ5VTQ0 682 aaPredicted RBP4.78□□□□□ -1.64
SMAD1-203ENST00000502342 C20orf204Q6ZNR8 217 aa4.78□□□□□ -1.64
SMAD1-203ENST00000502342 NLRP13Q86W25 1043 aa4.78□□□□□ -1.64
SMAD1-203ENST00000502342 TTC16Q8NEE8 873 aa4.78□□□□□ -1.64
SMAD1-203ENST00000502342 TRIM11Q96F44 468 aa4.78□□□□□ -1.64
SMAD1-203ENST00000502342 DCAF5Q96JK2 942 aa4.78□□□□□ -1.64
SMAD1-203ENST00000502342 NSUN5Q96P11 429 aaKnown RBP4.78□□□□□ -1.64
SMAD1-203ENST00000502342 JPH1Q9HDC5 661 aaPredicted RBP4.78□□□□□ -1.64
SMAD1-203ENST00000502342 FNDC3AQ9Y2H6 1198 aaKnown RBP4.78□□□□□ -1.64
SMAD1-203ENST00000502342 LOC102724428A0A0B4J2F2 783 aa4.77□□□□□ -1.65
SMAD1-203ENST00000502342 PIK3R2O00459 728 aa4.77□□□□□ -1.65
SMAD1-203ENST00000502342 GNB5O14775 395 aa4.77□□□□□ -1.65
SMAD1-203ENST00000502342 LILRB5O75023 590 aa4.77□□□□□ -1.65
SMAD1-203ENST00000502342 CYP2E1P05181 493 aaPredicted RBP4.77□□□□□ -1.65
SMAD1-203ENST00000502342 SIK1P57059 783 aa4.77□□□□□ -1.65
SMAD1-203ENST00000502342 PERM1Q5SV97 790 aa4.77□□□□□ -1.65
SMAD1-203ENST00000502342 ELMSAN1Q6PJG2 1045 aa4.77□□□□□ -1.65
SMAD1-203ENST00000502342 DMRTC2Q8IXT2 367 aaPredicted RBP4.77□□□□□ -1.65
SMAD1-203ENST00000502342 SMG9Q9H0W8 520 aaKnown RBP4.77□□□□□ -1.65
SMAD1-203ENST00000502342 C11orf16Q9NQ32 467 aa4.77□□□□□ -1.65
SMAD1-203ENST00000502342 CCDC87Q9NVE4 849 aa4.77□□□□□ -1.65
SMAD1-203ENST00000502342 NAGPAQ9UK23 515 aa4.77□□□□□ -1.65
SMAD1-203ENST00000502342 POLIQ9UNA4 740 aa4.77□□□□□ -1.65
SMAD1-203ENST00000502342 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP4.77□□□□□ -1.65
SMAD1-203ENST00000502342 KRBA1A5PL33 1030 aa4.76□□□□□ -1.65
SMAD1-203ENST00000502342 FAM13AO94988 1023 aa4.76□□□□□ -1.65
SMAD1-203ENST00000502342 PDGFAP04085 211 aa4.76□□□□□ -1.65
SMAD1-203ENST00000502342 PCSK2P16519 638 aa4.76□□□□□ -1.65
SMAD1-203ENST00000502342 COL9A3Q14050 684 aaPredicted RBP4.76□□□□□ -1.65
SMAD1-203ENST00000502342 PCSK7Q16549 785 aa4.76□□□□□ -1.65
SMAD1-203ENST00000502342 COL13A1Q5TAT6 717 aaPredicted RBP4.76□□□□□ -1.65
SMAD1-203ENST00000502342 GPAT2Q6NUI2 795 aa4.76□□□□□ -1.65
SMAD1-203ENST00000502342 TRPM4Q8TD43 1214 aa4.76□□□□□ -1.65
SMAD1-203ENST00000502342 ELP3Q9H9T3 547 aa4.76□□□□□ -1.65
SMAD1-203ENST00000502342 TMEM63CQ9P1W3 806 aa4.76□□□□□ -1.65
SMAD1-203ENST00000502342 CNTN3Q9P232 1028 aa4.76□□□□□ -1.65
SMAD1-203ENST00000502342 EIF2AK2P19525 551 aaKnown RBP4.75□□□□□ -1.65
SMAD1-203ENST00000502342 MZF1P28698 734 aaPredicted RBP4.75□□□□□ -1.65
SMAD1-203ENST00000502342 AFF1P51825 1210 aaKnown RBP4.75□□□□□ -1.65
SMAD1-203ENST00000502342 NRLP54845 237 aa4.75□□□□□ -1.65
SMAD1-203ENST00000502342 GPLD1P80108 840 aa4.75□□□□□ -1.65
SMAD1-203ENST00000502342 TRIM28Q13263 835 aaKnown RBP4.75□□□□□ -1.65
SMAD1-203ENST00000502342 GRIK4Q16099 956 aa4.75□□□□□ -1.65
SMAD1-203ENST00000502342 ALKBH2Q6NS38 261 aa4.75□□□□□ -1.65
SMAD1-203ENST00000502342 ZNF438Q7Z4V0 828 aa4.75□□□□□ -1.65
SMAD1-203ENST00000502342 C1orf127Q8N9H9 656 aa4.75□□□□□ -1.65
SMAD1-203ENST00000502342 LPIN3Q9BQK8 851 aa4.75□□□□□ -1.65
SMAD1-203ENST00000502342 H3BRB1 525 aa4.74□□□□□ -1.65
SMAD1-203ENST00000502342 FZD6O60353 706 aa4.74□□□□□ -1.65
SMAD1-203ENST00000502342 ICMTO60725 284 aa4.74□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms