RNA–Protein interactions for RNA: ENST00000498725.5

CCDC171-209, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 498 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-209ENST00000498725 RGL2O15211 777 aa12.12□□□□□ -0.47
CCDC171-209ENST00000498725 NTSR2O95665 410 aa12.12□□□□□ -0.47
CCDC171-209ENST00000498725 GRIPAP1Q4V328 841 aa12.12□□□□□ -0.47
CCDC171-209ENST00000498725 TRPM4Q8TD43 1214 aa12.12□□□□□ -0.47
CCDC171-209ENST00000498725 ZNF428Q96B54 188 aa12.12□□□□□ -0.47
CCDC171-209ENST00000498725 THUMPD2Q9BTF0 503 aaKnown RBP12.12□□□□□ -0.47
CCDC171-209ENST00000498725 ZNRF3Q9ULT6 936 aa12.12□□□□□ -0.47
CCDC171-209ENST00000498725 CA12O43570 354 aa12.11□□□□□ -0.47
CCDC171-209ENST00000498725 HIRAP54198 1017 aaPredicted RBP12.11□□□□□ -0.47
CCDC171-209ENST00000498725 BRPF1P55201 1214 aaPredicted RBP12.11□□□□□ -0.47
CCDC171-209ENST00000498725 SOX10P56693 466 aa12.11□□□□□ -0.47
CCDC171-209ENST00000498725 DPP8Q6V1X1 898 aaPredicted RBP12.11□□□□□ -0.47
CCDC171-209ENST00000498725 PPP1R42Q7Z4L9 355 aa12.11□□□□□ -0.47
CCDC171-209ENST00000498725 USP48Q86UV5 1035 aa12.11□□□□□ -0.47
CCDC171-209ENST00000498725 NLRP3Q96P20 1036 aa12.11□□□□□ -0.47
CCDC171-209ENST00000498725 ATP6V0A2Q9Y487 856 aa12.11□□□□□ -0.47
CCDC171-209ENST00000498725 ABCC4O15439 1325 aa12.11□□□□□ -0.47
CCDC171-209ENST00000498725 HUNKP57058 714 aa12.1□□□□□ -0.47
CCDC171-209ENST00000498725 ZNF34Q8IZ26 560 aa12.1□□□□□ -0.47
CCDC171-209ENST00000498725 SUPT20HQ8NEM7 779 aa12.1□□□□□ -0.47
CCDC171-209ENST00000498725 IBTKQ9P2D0 1353 aaPredicted RBP12.09□□□□□ -0.47
CCDC171-209ENST00000498725 HTATSF1O43719 755 aaKnown RBP12.09□□□□□ -0.47
CCDC171-209ENST00000498725 EIF4A1P60842 406 aaKnown RBP12.09□□□□□ -0.47
CCDC171-209ENST00000498725 GIGYF2Q6Y7W6 1299 aaKnown RBP12.09□□□□□ -0.47
CCDC171-209ENST00000498725 MPNDQ8N594 471 aa12.09□□□□□ -0.47
CCDC171-209ENST00000498725 CNOT7Q9UIV1 285 aaKnown RBP12.09□□□□□ -0.47
CCDC171-209ENST00000498725 ANXA1P04083 346 aa12.08□□□□□ -0.48
CCDC171-209ENST00000498725 HCLS1P14317 486 aaPredicted RBP12.08□□□□□ -0.48
CCDC171-209ENST00000498725 EIF2S2P20042 333 aaKnown RBP12.08□□□□□ -0.48
CCDC171-209ENST00000498725 PPP2R1AP30153 589 aa12.08□□□□□ -0.48
CCDC171-209ENST00000498725 TNIP1Q15025 636 aa12.08□□□□□ -0.48
CCDC171-209ENST00000498725 RBM26Q5T8P6 1007 aaKnown RBP12.08□□□□□ -0.48
CCDC171-209ENST00000498725 CDC37L1Q7L3B6 337 aa12.08□□□□□ -0.48
CCDC171-209ENST00000498725 MICALL2Q8IY33 904 aa12.08□□□□□ -0.48
CCDC171-209ENST00000498725 UTP14AQ9BVJ6 771 aaKnown RBP12.08□□□□□ -0.48
CCDC171-209ENST00000498725 PCDH10Q9P2E7 1040 aa12.08□□□□□ -0.48
CCDC171-209ENST00000498725 ZBTB12Q9Y330 459 aaPredicted RBP12.08□□□□□ -0.48
CCDC171-209ENST00000498725 H7C1D1 291 aa12.07□□□□□ -0.48
CCDC171-209ENST00000498725 NEFMP07197 916 aa12.07□□□□□ -0.48
CCDC171-209ENST00000498725 NOGQ13253 232 aa12.07□□□□□ -0.48
CCDC171-209ENST00000498725 TBC1D10BQ4KMP7 808 aaPredicted RBP12.07□□□□□ -0.48
CCDC171-209ENST00000498725 SAMD7Q7Z3H4 446 aa12.07□□□□□ -0.48
CCDC171-209ENST00000498725 PNISRQ8TF01 805 aaKnown RBP12.07□□□□□ -0.48
CCDC171-209ENST00000498725 NECTIN2Q92692 538 aa12.07□□□□□ -0.48
CCDC171-209ENST00000498725 HHIPL1Q96JK4 782 aa12.07□□□□□ -0.48
CCDC171-209ENST00000498725 PGAP2Q9UHJ9 254 aa12.07□□□□□ -0.48
CCDC171-209ENST00000498725 YDJCA8MPS7 323 aa12.06□□□□□ -0.48
CCDC171-209ENST00000498725 ADM5C9JUS6 153 aa12.06□□□□□ -0.48
CCDC171-209ENST00000498725 RIMBP2O15034 1052 aa12.06□□□□□ -0.48
CCDC171-209ENST00000498725 TRPA1O75762 1119 aa12.06□□□□□ -0.48
CCDC171-209ENST00000498725 KIAA2012Q0VF49 1180 aa12.06□□□□□ -0.48
CCDC171-209ENST00000498725 AIMP1Q12904 312 aaKnown RBP12.06□□□□□ -0.48
CCDC171-209ENST00000498725 PARP10Q53GL7 1025 aa12.06□□□□□ -0.48
CCDC171-209ENST00000498725 DDX46Q7L014 1031 aaKnown RBP12.06□□□□□ -0.48
CCDC171-209ENST00000498725 SP8Q8IXZ3 490 aa12.06□□□□□ -0.48
CCDC171-209ENST00000498725 RTFDC1Q9BY42 306 aaPredicted RBP12.06□□□□□ -0.48
CCDC171-209ENST00000498725 VPS33BQ9H267 617 aa12.06□□□□□ -0.48
CCDC171-209ENST00000498725 DDX60Q8IY21 1712 aaKnown RBP12.06□□□□□ -0.48
CCDC171-209ENST00000498725 DUOX1Q9NRD9 1551 aa12.05□□□□□ -0.48
CCDC171-209ENST00000498725 ZNF157P51786 506 aaPredicted RBP12.05□□□□□ -0.48
CCDC171-209ENST00000498725 KIF23Q02241 960 aaPredicted RBP12.05□□□□□ -0.48
CCDC171-209ENST00000498725 PROSER3Q2NL68 480 aa12.05□□□□□ -0.48
CCDC171-209ENST00000498725 RGMBQ6NW40 437 aa12.05□□□□□ -0.48
CCDC171-209ENST00000498725 KRT26Q7Z3Y9 468 aa12.05□□□□□ -0.48
CCDC171-209ENST00000498725 C2orf69Q8N8R5 385 aa12.05□□□□□ -0.48
CCDC171-209ENST00000498725 ZC3H15Q8WU90 426 aaKnown RBP12.05□□□□□ -0.48
CCDC171-209ENST00000498725 DBNDD1Q9H9R9 158 aa12.05□□□□□ -0.48
CCDC171-209ENST00000498725 GBA2Q9HCG7 927 aaPredicted RBP12.05□□□□□ -0.48
CCDC171-209ENST00000498725 CDHR2Q9BYE9 1310 aa12.05□□□□□ -0.48
CCDC171-209ENST00000498725 LRRC37AA6NMS7 1700 aa12.04□□□□□ -0.48
CCDC171-209ENST00000498725 FAM155AB1AL88 458 aaPredicted RBP12.04□□□□□ -0.48
CCDC171-209ENST00000498725 PSMD14O00487 310 aa12.04□□□□□ -0.48
CCDC171-209ENST00000498725 BBOX1O75936 387 aa12.04□□□□□ -0.48
CCDC171-209ENST00000498725 EGFRP00533 1210 aa12.04□□□□□ -0.48
CCDC171-209ENST00000498725 SLC10A5Q5PT55 438 aa12.04□□□□□ -0.48
CCDC171-209ENST00000498725 TRMT112Q9UI30 125 aaKnown RBP12.04□□□□□ -0.48
CCDC171-209ENST00000498725 GRAPQ13588 217 aa12.03□□□□□ -0.48
CCDC171-209ENST00000498725 DOK7Q18PE1 504 aa12.03□□□□□ -0.48
CCDC171-209ENST00000498725 GRAPLQ8TC17 118 aaPredicted RBP12.03□□□□□ -0.48
CCDC171-209ENST00000498725 DCPSQ96C86 337 aaKnown RBP12.03□□□□□ -0.48
CCDC171-209ENST00000498725 KCNQ5Q9NR82 932 aa12.03□□□□□ -0.48
CCDC171-209ENST00000498725 RNF186Q9NXI6 227 aa12.03□□□□□ -0.48
CCDC171-209ENST00000498725 TSPYL4Q9UJ04 414 aa12.03□□□□□ -0.48
CCDC171-209ENST00000498725 C6orf229H3BNL8 230 aa12.02□□□□□ -0.49
CCDC171-209ENST00000498725 PDIA6Q15084 440 aa12.02□□□□□ -0.49
CCDC171-209ENST00000498725 NFE2L2Q16236 605 aa12.02□□□□□ -0.49
CCDC171-209ENST00000498725 WASHC4Q2M389 1173 aa12.02□□□□□ -0.49
CCDC171-209ENST00000498725 NLRP10Q86W26 655 aa12.02□□□□□ -0.49
CCDC171-209ENST00000498725 NSFL1CQ9UNZ2 370 aaKnown RBP12.02□□□□□ -0.49
CCDC171-209ENST00000498725 COL4A1P02462 1669 aa12.02□□□□□ -0.49
CCDC171-209ENST00000498725 RTL5Q5HYW3 569 aaPredicted RBP12.01□□□□□ -0.49
CCDC171-209ENST00000498725 COPS6Q7L5N1 327 aa12.01□□□□□ -0.49
CCDC171-209ENST00000498725 XAGE3Q8WTP9 111 aa12.01□□□□□ -0.49
CCDC171-209ENST00000498725 CCDC102AQ96A19 550 aa12.01□□□□□ -0.49
CCDC171-209ENST00000498725 ASTN2O75129 1339 aaPredicted RBP12.01□□□□□ -0.49
CCDC171-209ENST00000498725 SCN9AQ15858 1988 aa12.01□□□□□ -0.49
CCDC171-209ENST00000498725 ECE2O60344 883 aa12□□□□□ -0.49
CCDC171-209ENST00000498725 LRP10Q7Z4F1 713 aa12□□□□□ -0.49
CCDC171-209ENST00000498725 CSRNP1Q96S65 589 aa12□□□□□ -0.49
CCDC171-209ENST00000498725 SAGE1Q9NXZ1 904 aa12□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms