RNA–Protein interactions for RNA: ENST00000498689.5

CSTF1-207, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 1 (best)

Gene CSTF1, Length 585 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-207ENST00000498689 USP48Q86UV5 1035 aa7.03□□□□□ -1.28
CSTF1-207ENST00000498689 RASAL3Q86YV0 1011 aa7.03□□□□□ -1.28
CSTF1-207ENST00000498689 IFNLR1Q8IU57 520 aaPredicted RBP7.03□□□□□ -1.28
CSTF1-207ENST00000498689 C7orf43Q8WVR3 580 aa7.03□□□□□ -1.28
CSTF1-207ENST00000498689 IP6K1Q92551 441 aa7.03□□□□□ -1.28
CSTF1-207ENST00000498689 FAM161BQ96MY7 647 aa7.03□□□□□ -1.28
CSTF1-207ENST00000498689 TTC21AQ8NDW8 1320 aa7.02□□□□□ -1.28
CSTF1-207ENST00000498689 FBLN1P23142 703 aa7.02□□□□□ -1.29
CSTF1-207ENST00000498689 IARSP41252 1262 aaKnown RBP7.02□□□□□ -1.29
CSTF1-207ENST00000498689 CRKLP46109 303 aaKnown RBP7.02□□□□□ -1.29
CSTF1-207ENST00000498689 BCAMP50895 628 aa7.02□□□□□ -1.29
CSTF1-207ENST00000498689 FKBP4Q02790 459 aaKnown RBP eCLIP7.02□□□□□ -1.29
CSTF1-207ENST00000498689 NME9Q86XW9 330 aa7.02□□□□□ -1.29
CSTF1-207ENST00000498689 SYMPKQ92797 1274 aaKnown RBP7.02□□□□□ -1.29
CSTF1-207ENST00000498689 ZNF333Q96JL9 665 aa7.02□□□□□ -1.29
CSTF1-207ENST00000498689 HS3ST6Q96QI5 342 aa7.02□□□□□ -1.29
CSTF1-207ENST00000498689 P2RX7Q99572 595 aaKnown RBP7.02□□□□□ -1.29
CSTF1-207ENST00000498689 BCL2L12Q9HB09 334 aa7.02□□□□□ -1.29
CSTF1-207ENST00000498689 TMOD3Q9NYL9 352 aa7.02□□□□□ -1.29
CSTF1-207ENST00000498689 PGAP2Q9UHJ9 254 aa7.02□□□□□ -1.29
CSTF1-207ENST00000498689 PTPN22Q9Y2R2 807 aa7.02□□□□□ -1.29
CSTF1-207ENST00000498689 MRC1P22897 1456 aa7.01□□□□□ -1.29
CSTF1-207ENST00000498689 SUGP2Q8IX01 1082 aaKnown RBP eCLIP7.01□□□□□ -1.29
CSTF1-207ENST00000498689 SHISA4Q96DD7 197 aa7.01□□□□□ -1.29
CSTF1-207ENST00000498689 GBA2Q9HCG7 927 aaPredicted RBP7.01□□□□□ -1.29
CSTF1-207ENST00000498689 MAP3K19Q56UN5 1328 aa7.01□□□□□ -1.29
CSTF1-207ENST00000498689 IRS2Q9Y4H2 1338 aa7.01□□□□□ -1.29
CSTF1-207ENST00000498689 CHD6Q8TD26 2715 aa7□□□□□ -1.29
CSTF1-207ENST00000498689 SCN7AQ01118 1682 aa7□□□□□ -1.29
CSTF1-207ENST00000498689 CHD8Q9HCK8 2581 aa7□□□□□ -1.29
CSTF1-207ENST00000498689 POTEB3A0JP26 581 aa7□□□□□ -1.29
CSTF1-207ENST00000498689 SHTN1A0MZ66 631 aa7□□□□□ -1.29
CSTF1-207ENST00000498689 MRE11P49959 708 aa7□□□□□ -1.29
CSTF1-207ENST00000498689 NOM1Q5C9Z4 860 aaKnown RBP7□□□□□ -1.29
CSTF1-207ENST00000498689 POTEBQ6S5H4 581 aa7□□□□□ -1.29
CSTF1-207ENST00000498689 MAFAQ8NHW3 353 aaPredicted RBP7□□□□□ -1.29
CSTF1-207ENST00000498689 TRPM4Q8TD43 1214 aa7□□□□□ -1.29
CSTF1-207ENST00000498689 ADARB2Q9NS39 739 aaKnown RBP7□□□□□ -1.29
CSTF1-207ENST00000498689 GPRC5DQ9NZD1 345 aa7□□□□□ -1.29
CSTF1-207ENST00000498689 BOLA1Q9Y3E2 137 aa7□□□□□ -1.29
CSTF1-207ENST00000498689 SNED1Q8TER0 1413 aa7□□□□□ -1.29
CSTF1-207ENST00000498689 EPG5Q9HCE0 2579 aa7□□□□□ -1.29
CSTF1-207ENST00000498689 TRANK1O15050 2925 aa6.99□□□□□ -1.29
CSTF1-207ENST00000498689 TATP17735 454 aaPredicted RBP6.99□□□□□ -1.29
CSTF1-207ENST00000498689 SLC4A8Q2Y0W8 1093 aa6.99□□□□□ -1.29
CSTF1-207ENST00000498689 CCDC93Q567U6 631 aa6.99□□□□□ -1.29
CSTF1-207ENST00000498689 CDC37L1Q7L3B6 337 aa6.99□□□□□ -1.29
CSTF1-207ENST00000498689 SLC51AQ86UW1 340 aa6.99□□□□□ -1.29
CSTF1-207ENST00000498689 RAPGEF4Q8WZA2 1011 aa6.99□□□□□ -1.29
CSTF1-207ENST00000498689 ARIH1Q9Y4X5 557 aaPredicted RBP6.99□□□□□ -1.29
CSTF1-207ENST00000498689 WDR87Q6ZQQ6 2873 aa6.99□□□□□ -1.29
CSTF1-207ENST00000498689 CGNL1Q0VF96 1302 aa6.99□□□□□ -1.29
CSTF1-207ENST00000498689 KTN1Q86UP2 1357 aaKnown RBP6.98□□□□□ -1.29
CSTF1-207ENST00000498689 LAMB2P55268 1798 aa6.98□□□□□ -1.29
CSTF1-207ENST00000498689 ADM5C9JUS6 153 aa6.98□□□□□ -1.29
CSTF1-207ENST00000498689 ZPR1O75312 459 aa6.98□□□□□ -1.29
CSTF1-207ENST00000498689 KRT37O76014 449 aa6.98□□□□□ -1.29
CSTF1-207ENST00000498689 HOXC9P31274 260 aa6.98□□□□□ -1.29
CSTF1-207ENST00000498689 EIF6P56537 245 aaKnown RBP6.98□□□□□ -1.29
CSTF1-207ENST00000498689 NKX1-1Q15270 411 aaPredicted RBP6.98□□□□□ -1.29
CSTF1-207ENST00000498689 INTS5Q6P9B9 1019 aaKnown RBP6.98□□□□□ -1.29
CSTF1-207ENST00000498689 C2orf69Q8N8R5 385 aa6.98□□□□□ -1.29
CSTF1-207ENST00000498689 KDM2AQ9Y2K7 1162 aa6.98□□□□□ -1.29
CSTF1-207ENST00000498689 ZNF609O15014 1411 aa6.98□□□□□ -1.29
CSTF1-207ENST00000498689 ECM2O94769 699 aaPredicted RBP6.97□□□□□ -1.29
CSTF1-207ENST00000498689 SRGNP10124 158 aa6.97□□□□□ -1.29
CSTF1-207ENST00000498689 PDE6BP35913 854 aa6.97□□□□□ -1.29
CSTF1-207ENST00000498689 ATRXP46100 2492 aa6.97□□□□□ -1.29
CSTF1-207ENST00000498689 MYO9BQ13459 2157 aa6.97□□□□□ -1.29
CSTF1-207ENST00000498689 LRIT3Q3SXY7 679 aa6.97□□□□□ -1.29
CSTF1-207ENST00000498689 TJAP1Q5JTD0 557 aa6.97□□□□□ -1.29
CSTF1-207ENST00000498689 SOGA3Q5TF21 947 aa6.97□□□□□ -1.29
CSTF1-207ENST00000498689 PRR5LQ6MZQ0 368 aa6.97□□□□□ -1.29
CSTF1-207ENST00000498689 UBE2Q1Q7Z7E8 422 aa6.97□□□□□ -1.29
CSTF1-207ENST00000498689 CD99L2Q8TCZ2 262 aa6.97□□□□□ -1.29
CSTF1-207ENST00000498689 CNKSR1Q969H4 720 aa6.97□□□□□ -1.29
CSTF1-207ENST00000498689 BRIP1Q9BX63 1249 aa6.97□□□□□ -1.29
CSTF1-207ENST00000498689 HCN4Q9Y3Q4 1203 aa6.97□□□□□ -1.29
CSTF1-207ENST00000498689 ANKRD11Q6UB99 2663 aaPredicted RBP6.97□□□□□ -1.29
CSTF1-207ENST00000498689 TM4SF4P48230 202 aa6.96□□□□□ -1.3
CSTF1-207ENST00000498689 STYK1Q6J9G0 422 aa6.96□□□□□ -1.3
CSTF1-207ENST00000498689 MOB2Q70IA6 237 aa6.96□□□□□ -1.3
CSTF1-207ENST00000498689 ZNF710Q8N1W2 664 aa6.96□□□□□ -1.3
CSTF1-207ENST00000498689 JDP2Q8WYK2 163 aa6.96□□□□□ -1.3
CSTF1-207ENST00000498689 GDF15Q99988 308 aa6.96□□□□□ -1.3
CSTF1-207ENST00000498689 LRFN3Q9BTN0 628 aa6.96□□□□□ -1.3
CSTF1-207ENST00000498689 KRTAP3-3Q9BYR6 98 aa6.96□□□□□ -1.3
CSTF1-207ENST00000498689 KRTAP3-2Q9BYR7 98 aa6.96□□□□□ -1.3
CSTF1-207ENST00000498689 TRIOO75962 3097 aa6.96□□□□□ -1.3
CSTF1-207ENST00000498689 GMPSP49915 693 aaPredicted RBP6.95□□□□□ -1.3
CSTF1-207ENST00000498689 EFCAB3Q8N7B9 438 aa6.95□□□□□ -1.3
CSTF1-207ENST00000498689 CDX2Q99626 313 aaPredicted RBP6.95□□□□□ -1.3
CSTF1-207ENST00000498689 NARFQ9UHQ1 456 aa6.95□□□□□ -1.3
CSTF1-207ENST00000498689 NR2E3Q9Y5X4 410 aa6.95□□□□□ -1.3
CSTF1-207ENST00000498689 SOS1Q07889 1333 aaPredicted RBP6.95□□□□□ -1.3
CSTF1-207ENST00000498689 PTCD1O75127 700 aaKnown RBP6.94□□□□□ -1.3
CSTF1-207ENST00000498689 EGFRP00533 1210 aa6.94□□□□□ -1.3
CSTF1-207ENST00000498689 HOXB3P14651 431 aaPredicted RBP6.94□□□□□ -1.3
CSTF1-207ENST00000498689 BMP8BP34820 402 aa6.94□□□□□ -1.3
CSTF1-207ENST00000498689 TBC1D9BQ66K14 1250 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms