RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 DCHS1Q96JQ0 3298 aa7.64□□□□□ -1.19
FXN-205ENST00000498653 SSC5DA1L4H1 1573 aa7.64□□□□□ -1.19
FXN-205ENST00000498653 CFAP47Q6ZTR5 3102 aa7.64□□□□□ -1.19
FXN-205ENST00000498653 COL2A1P02458 1487 aaPredicted RBP7.64□□□□□ -1.19
FXN-205ENST00000498653 CYP27B1O15528 508 aa7.64□□□□□ -1.19
FXN-205ENST00000498653 FOXK2Q01167 660 aa7.64□□□□□ -1.19
FXN-205ENST00000498653 FKBP4Q02790 459 aaKnown RBP eCLIP7.64□□□□□ -1.19
FXN-205ENST00000498653 C7orf43Q8WVR3 580 aa7.64□□□□□ -1.19
FXN-205ENST00000498653 GDF15Q99988 308 aa7.64□□□□□ -1.19
FXN-205ENST00000498653 LRFN3Q9BTN0 628 aa7.64□□□□□ -1.19
FXN-205ENST00000498653 GBA2Q9HCG7 927 aaPredicted RBP7.64□□□□□ -1.19
FXN-205ENST00000498653 GJA3Q9Y6H8 435 aa7.64□□□□□ -1.19
FXN-205ENST00000498653 ATRXP46100 2492 aa7.64□□□□□ -1.19
FXN-205ENST00000498653 SLC24A1O60721 1099 aa7.63□□□□□ -1.19
FXN-205ENST00000498653 BMP8BP34820 402 aa7.63□□□□□ -1.19
FXN-205ENST00000498653 IRX5P78411 483 aaPredicted RBP7.63□□□□□ -1.19
FXN-205ENST00000498653 SOGA3Q5TF21 947 aa7.63□□□□□ -1.19
FXN-205ENST00000498653 C1QTNF1Q9BXJ1 281 aa7.63□□□□□ -1.19
FXN-205ENST00000498653 ADARB2Q9NS39 739 aaKnown RBP7.63□□□□□ -1.19
FXN-205ENST00000498653 ZNF646O15015 1829 aaPredicted RBP7.63□□□□□ -1.19
FXN-205ENST00000498653 CGNL1Q0VF96 1302 aa7.62□□□□□ -1.19
FXN-205ENST00000498653 SPTBN4Q9H254 2564 aa7.62□□□□□ -1.19
FXN-205ENST00000498653 POTEB2H3BUK9 544 aa7.62□□□□□ -1.19
FXN-205ENST00000498653 SERPINB2P05120 415 aa7.62□□□□□ -1.19
FXN-205ENST00000498653 IARSP41252 1262 aaKnown RBP7.62□□□□□ -1.19
FXN-205ENST00000498653 CAP1Q01518 475 aa7.62□□□□□ -1.19
FXN-205ENST00000498653 LHX8Q68G74 356 aa7.62□□□□□ -1.19
FXN-205ENST00000498653 FAM109BQ6ICB4 259 aaPredicted RBP7.62□□□□□ -1.19
FXN-205ENST00000498653 FAM161BQ96MY7 647 aa7.62□□□□□ -1.19
FXN-205ENST00000498653 ATG3Q9NT62 314 aa7.62□□□□□ -1.19
FXN-205ENST00000498653 NR2E3Q9Y5X4 410 aa7.62□□□□□ -1.19
FXN-205ENST00000498653 SETXQ7Z333 2677 aaKnown RBP7.62□□□□□ -1.19
FXN-205ENST00000498653 POLR2AP24928 1970 aaKnown RBP7.61□□□□□ -1.19
FXN-205ENST00000498653 HIRAP54198 1017 aaPredicted RBP7.61□□□□□ -1.19
FXN-205ENST00000498653 KCTD2Q14681 263 aa7.61□□□□□ -1.19
FXN-205ENST00000498653 CCDC93Q567U6 631 aa7.61□□□□□ -1.19
FXN-205ENST00000498653 USPL1Q5W0Q7 1092 aa7.61□□□□□ -1.19
FXN-205ENST00000498653 CDC37L1Q7L3B6 337 aa7.61□□□□□ -1.19
FXN-205ENST00000498653 LTV1Q96GA3 475 aaPredicted RBP7.61□□□□□ -1.19
FXN-205ENST00000498653 CABP1Q9NZU7 370 aa7.61□□□□□ -1.19
FXN-205ENST00000498653 SLC4A8Q2Y0W8 1093 aa7.6□□□□□ -1.19
FXN-205ENST00000498653 OLFM4Q6UX06 510 aa7.6□□□□□ -1.19
FXN-205ENST00000498653 PDCD7Q8N8D1 485 aaKnown RBP7.6□□□□□ -1.19
FXN-205ENST00000498653 MS4A4AQ96JQ5 239 aa7.6□□□□□ -1.19
FXN-205ENST00000498653 GPRC5DQ9NZD1 345 aa7.6□□□□□ -1.19
FXN-205ENST00000498653 LAMB2P55268 1798 aa7.59□□□□□ -1.19
FXN-205ENST00000498653 USP48Q86UV5 1035 aa7.59□□□□□ -1.19
FXN-205ENST00000498653 PPARGC1BQ86YN6 1023 aaKnown RBP7.59□□□□□ -1.19
FXN-205ENST00000498653 TDHQ8IZJ6 230 aa7.59□□□□□ -1.19
FXN-205ENST00000498653 C2orf69Q8N8R5 385 aa7.59□□□□□ -1.19
FXN-205ENST00000498653 TRPM4Q8TD43 1214 aa7.59□□□□□ -1.19
FXN-205ENST00000498653 ZC3H15Q8WU90 426 aaKnown RBP7.59□□□□□ -1.19
FXN-205ENST00000498653 IP6K1Q92551 441 aa7.59□□□□□ -1.19
FXN-205ENST00000498653 CDX2Q99626 313 aaPredicted RBP7.59□□□□□ -1.19
FXN-205ENST00000498653 HTATIP2Q9BUP3 242 aa7.59□□□□□ -1.19
FXN-205ENST00000498653 XIRP2A4UGR9 3374 aa7.59□□□□□ -1.2
FXN-205ENST00000498653 LAMB1P07942 1786 aa7.59□□□□□ -1.2
FXN-205ENST00000498653 CHD6Q8TD26 2715 aa7.58□□□□□ -1.2
FXN-205ENST00000498653 CRKLP46109 303 aaKnown RBP7.58□□□□□ -1.2
FXN-205ENST00000498653 TM4SF4P48230 202 aa7.58□□□□□ -1.2
FXN-205ENST00000498653 EIF6P56537 245 aaKnown RBP7.58□□□□□ -1.2
FXN-205ENST00000498653 SAMD7Q7Z3H4 446 aa7.58□□□□□ -1.2
FXN-205ENST00000498653 ADAMTS19Q8TE59 1207 aa7.58□□□□□ -1.2
FXN-205ENST00000498653 CNKSR1Q969H4 720 aa7.58□□□□□ -1.2
FXN-205ENST00000498653 BCL2L12Q9HB09 334 aa7.58□□□□□ -1.2
FXN-205ENST00000498653 PDZRN3Q9UPQ7 1066 aa7.58□□□□□ -1.2
FXN-205ENST00000498653 SCN7AQ01118 1682 aa7.57□□□□□ -1.2
FXN-205ENST00000498653 MYCP01106 439 aaPredicted RBP7.57□□□□□ -1.2
FXN-205ENST00000498653 STYK1Q6J9G0 422 aa7.57□□□□□ -1.2
FXN-205ENST00000498653 USHBP1Q8N6Y0 703 aa7.57□□□□□ -1.2
FXN-205ENST00000498653 USP38Q8NB14 1042 aa7.57□□□□□ -1.2
FXN-205ENST00000498653 BRIP1Q9BX63 1249 aa7.57□□□□□ -1.2
FXN-205ENST00000498653 TMOD3Q9NYL9 352 aa7.57□□□□□ -1.2
FXN-205ENST00000498653 BOLA1Q9Y3E2 137 aa7.57□□□□□ -1.2
FXN-205ENST00000498653 SRGNP10124 158 aa7.56□□□□□ -1.2
FXN-205ENST00000498653 PDE6BP35913 854 aa7.56□□□□□ -1.2
FXN-205ENST00000498653 CD99L2Q8TCZ2 262 aa7.56□□□□□ -1.2
FXN-205ENST00000498653 UHRF1Q96T88 793 aaPredicted RBP7.56□□□□□ -1.2
FXN-205ENST00000498653 ADM5C9JUS6 153 aa7.55□□□□□ -1.2
FXN-205ENST00000498653 PPP1R37O75864 691 aa7.55□□□□□ -1.2
FXN-205ENST00000498653 RGS20O76081 388 aa7.55□□□□□ -1.2
FXN-205ENST00000498653 NHLH1Q02575 133 aa7.55□□□□□ -1.2
FXN-205ENST00000498653 MAP3K11Q16584 847 aa7.55□□□□□ -1.2
FXN-205ENST00000498653 SLC9C1Q4G0N8 1177 aa7.55□□□□□ -1.2
FXN-205ENST00000498653 NBPF6Q5VWK0 638 aa7.55□□□□□ -1.2
FXN-205ENST00000498653 NBPF4Q96M43 638 aa7.55□□□□□ -1.2
FXN-205ENST00000498653 C11orf16Q9NQ32 467 aa7.55□□□□□ -1.2
FXN-205ENST00000498653 PTCH2Q9Y6C5 1203 aa7.55□□□□□ -1.2
FXN-205ENST00000498653 ZSWIM8A7E2V4 1837 aa7.55□□□□□ -1.2
FXN-205ENST00000498653 PRR5LQ6MZQ0 368 aa7.54□□□□□ -1.2
FXN-205ENST00000498653 VSIG10Q8N0Z9 540 aa7.54□□□□□ -1.2
FXN-205ENST00000498653 MYLIPQ8WY64 445 aa7.54□□□□□ -1.2
FXN-205ENST00000498653 JDP2Q8WYK2 163 aa7.54□□□□□ -1.2
FXN-205ENST00000498653 RAPGEF4Q8WZA2 1011 aa7.54□□□□□ -1.2
FXN-205ENST00000498653 TSHZ2Q9NRE2 1034 aa7.54□□□□□ -1.2
FXN-205ENST00000498653 ANKRD11Q6UB99 2663 aaPredicted RBP7.54□□□□□ -1.2
FXN-205ENST00000498653 SOS1Q07889 1333 aaPredicted RBP7.53□□□□□ -1.2
FXN-205ENST00000498653 EVI5O60447 810 aa7.53□□□□□ -1.2
FXN-205ENST00000498653 ZPR1O75312 459 aa7.53□□□□□ -1.2
FXN-205ENST00000498653 TATP17735 454 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 114.5 ms