RNA–Protein interactions for RNA: ENST00000498519.5

SHANK2-217, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 3

Gene SHANK2, Length 510 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-217ENST00000498519 CYP4F22Q6NT55 531 aa17.86■□□□□ 0.45
SHANK2-217ENST00000498519 ABHD8Q96I13 439 aa17.86■□□□□ 0.45
SHANK2-217ENST00000498519 H7C1D1 291 aa17.85■□□□□ 0.45
SHANK2-217ENST00000498519 COL4A5P29400 1685 aa17.85■□□□□ 0.45
SHANK2-217ENST00000498519 AIMP1Q12904 312 aaKnown RBP17.85■□□□□ 0.45
SHANK2-217ENST00000498519 CDC37L1Q7L3B6 337 aa17.85■□□□□ 0.45
SHANK2-217ENST00000498519 XAGE3Q8WTP9 111 aa17.85■□□□□ 0.45
SHANK2-217ENST00000498519 PGAP2Q9UHJ9 254 aa17.85■□□□□ 0.45
SHANK2-217ENST00000498519 TRAF5O00463 557 aa17.84■□□□□ 0.45
SHANK2-217ENST00000498519 CELF2O95319 508 aaKnown RBP17.84■□□□□ 0.45
SHANK2-217ENST00000498519 HCLS1P14317 486 aaPredicted RBP17.84■□□□□ 0.45
SHANK2-217ENST00000498519 TMPOP42166 694 aaKnown RBP17.84■□□□□ 0.45
SHANK2-217ENST00000498519 PROSER3Q2NL68 480 aa17.84■□□□□ 0.45
SHANK2-217ENST00000498519 SAPCD2Q86UD0 394 aa17.84■□□□□ 0.45
SHANK2-217ENST00000498519 HOXB7P09629 217 aa17.83■□□□□ 0.44
SHANK2-217ENST00000498519 RAD17O75943 681 aa17.82■□□□□ 0.44
SHANK2-217ENST00000498519 ANXA1P04083 346 aa17.82■□□□□ 0.44
SHANK2-217ENST00000498519 HSP90B1P14625 803 aaKnown RBP17.82■□□□□ 0.44
SHANK2-217ENST00000498519 DPF2Q92785 391 aa17.82■□□□□ 0.44
SHANK2-217ENST00000498519 NUP98P52948 1817 aa17.82■□□□□ 0.44
SHANK2-217ENST00000498519 CHL1O00533 1208 aa17.81■□□□□ 0.44
SHANK2-217ENST00000498519 BRPF1P55201 1214 aaPredicted RBP17.81■□□□□ 0.44
SHANK2-217ENST00000498519 FMR1Q06787 632 aaKnown RBP eCLIP17.81■□□□□ 0.44
SHANK2-217ENST00000498519 PLBD2Q8NHP8 589 aa17.81■□□□□ 0.44
SHANK2-217ENST00000498519 NECTIN2Q92692 538 aa17.81■□□□□ 0.44
SHANK2-217ENST00000498519 DBF4Q9UBU7 674 aaPredicted RBP17.81■□□□□ 0.44
SHANK2-217ENST00000498519 CNOT7Q9UIV1 285 aaKnown RBP17.81■□□□□ 0.44
SHANK2-217ENST00000498519 WASHC4Q2M389 1173 aa17.8■□□□□ 0.44
SHANK2-217ENST00000498519 HDGFL1Q5TGJ6 251 aa17.8■□□□□ 0.44
SHANK2-217ENST00000498519 ANKRD13DQ6ZTN6 518 aa17.8■□□□□ 0.44
SHANK2-217ENST00000498519 EYA3Q99504 573 aa17.8■□□□□ 0.44
SHANK2-217ENST00000498519 GLIS2Q9BZE0 524 aaPredicted RBP17.8■□□□□ 0.44
SHANK2-217ENST00000498519 LTBP1Q14766 1721 aa17.79■□□□□ 0.44
SHANK2-217ENST00000498519 RPS12P25398 132 aaKnown RBP17.79■□□□□ 0.44
SHANK2-217ENST00000498519 NOGQ13253 232 aa17.79■□□□□ 0.44
SHANK2-217ENST00000498519 SF3B3Q15393 1217 aaKnown RBP17.79■□□□□ 0.44
SHANK2-217ENST00000498519 ZNF408Q9H9D4 720 aa17.79■□□□□ 0.44
SHANK2-217ENST00000498519 NSFL1CQ9UNZ2 370 aaKnown RBP17.79■□□□□ 0.44
SHANK2-217ENST00000498519 WDR43Q15061 677 aaKnown RBP eCLIP17.78■□□□□ 0.44
SHANK2-217ENST00000498519 SLC51AQ86UW1 340 aa17.78■□□□□ 0.44
SHANK2-217ENST00000498519 MICALL2Q8IY33 904 aa17.78■□□□□ 0.44
SHANK2-217ENST00000498519 HYPKQ9NX55 129 aa17.78■□□□□ 0.44
SHANK2-217ENST00000498519 CHPF2Q9P2E5 772 aa17.78■□□□□ 0.44
SHANK2-217ENST00000498519 LAS1LQ9Y4W2 734 aaKnown RBP17.78■□□□□ 0.44
SHANK2-217ENST00000498519 CCDC85CA6NKD9 419 aa17.77■□□□□ 0.44
SHANK2-217ENST00000498519 AOC2O75106 756 aa17.77■□□□□ 0.44
SHANK2-217ENST00000498519 NEUROD2Q15784 382 aa17.77■□□□□ 0.44
SHANK2-217ENST00000498519 RUNDC1Q96C34 613 aa17.77■□□□□ 0.44
SHANK2-217ENST00000498519 CHMP4AQ9BY43 222 aa17.77■□□□□ 0.44
SHANK2-217ENST00000498519 THSD7BQ9C0I4 1608 aa17.76■□□□□ 0.43
SHANK2-217ENST00000498519 C6orf229H3BNL8 230 aa17.76■□□□□ 0.43
SHANK2-217ENST00000498519 HIRAP54198 1017 aaPredicted RBP17.76■□□□□ 0.43
SHANK2-217ENST00000498519 TRIM28Q13263 835 aaKnown RBP17.76■□□□□ 0.43
SHANK2-217ENST00000498519 ISCA1Q9BUE6 129 aa17.76■□□□□ 0.43
SHANK2-217ENST00000498519 MYBBP1AQ9BQG0 1328 aaKnown RBP17.75■□□□□ 0.43
SHANK2-217ENST00000498519 YDJCA8MPS7 323 aa17.75■□□□□ 0.43
SHANK2-217ENST00000498519 HUNKP57058 714 aa17.75■□□□□ 0.43
SHANK2-217ENST00000498519 TRPM4Q8TD43 1214 aa17.75■□□□□ 0.43
SHANK2-217ENST00000498519 DCPSQ96C86 337 aaKnown RBP17.75■□□□□ 0.43
SHANK2-217ENST00000498519 FAM89AQ96GI7 184 aa17.75■□□□□ 0.43
SHANK2-217ENST00000498519 DLG5Q8TDM6 1919 aa17.74■□□□□ 0.43
SHANK2-217ENST00000498519 PSMD14O00487 310 aa17.74■□□□□ 0.43
SHANK2-217ENST00000498519 MLLT1Q03111 559 aaPredicted RBP17.74■□□□□ 0.43
SHANK2-217ENST00000498519 KRT26Q7Z3Y9 468 aa17.74■□□□□ 0.43
SHANK2-217ENST00000498519 USP48Q86UV5 1035 aa17.74■□□□□ 0.43
SHANK2-217ENST00000498519 C2orf69Q8N8R5 385 aa17.74■□□□□ 0.43
SHANK2-217ENST00000498519 CCDC102AQ96A19 550 aa17.74■□□□□ 0.43
SHANK2-217ENST00000498519 CFAP44Q96MT7 982 aa17.74■□□□□ 0.43
SHANK2-217ENST00000498519 ZC3H12CQ9C0D7 883 aaKnown RBP17.74■□□□□ 0.43
SHANK2-217ENST00000498519 G3V3G9 751 aa17.73■□□□□ 0.43
SHANK2-217ENST00000498519 RPS8P62241 208 aaKnown RBP17.73■□□□□ 0.43
SHANK2-217ENST00000498519 FAM161AQ3B820 660 aa17.73■□□□□ 0.43
SHANK2-217ENST00000498519 DCAF8Q5TAQ9 597 aa17.73■□□□□ 0.43
SHANK2-217ENST00000498519 CELF1Q92879 486 aaKnown RBP17.73■□□□□ 0.43
SHANK2-217ENST00000498519 DBNDD1Q9H9R9 158 aa17.73■□□□□ 0.43
SHANK2-217ENST00000498519 ZBTB12Q9Y330 459 aaPredicted RBP17.73■□□□□ 0.43
SHANK2-217ENST00000498519 IRS4O14654 1257 aaPredicted RBP17.72■□□□□ 0.43
SHANK2-217ENST00000498519 RIMBP2O15034 1052 aa17.72■□□□□ 0.43
SHANK2-217ENST00000498519 RGS19P49795 217 aa17.72■□□□□ 0.43
SHANK2-217ENST00000498519 CALD1Q05682 793 aaKnown RBP17.72■□□□□ 0.43
SHANK2-217ENST00000498519 GOLGA2Q08379 1002 aa17.72■□□□□ 0.43
SHANK2-217ENST00000498519 CCDC146Q8IYE0 955 aa17.72■□□□□ 0.43
SHANK2-217ENST00000498519 TSKSQ9UJT2 592 aa17.72■□□□□ 0.43
SHANK2-217ENST00000498519 TRIM35Q9UPQ4 493 aa17.72■□□□□ 0.43
SHANK2-217ENST00000498519 ATP5J2-PTCD1G3V325 749 aa17.71■□□□□ 0.43
SHANK2-217ENST00000498519 ECE2O60344 883 aa17.71■□□□□ 0.43
SHANK2-217ENST00000498519 GPSM2P81274 684 aa17.71■□□□□ 0.43
SHANK2-217ENST00000498519 KRT24Q2M2I5 525 aa17.71■□□□□ 0.43
SHANK2-217ENST00000498519 RGMBQ6NW40 437 aa17.71■□□□□ 0.43
SHANK2-217ENST00000498519 SAMD7Q7Z3H4 446 aa17.71■□□□□ 0.43
SHANK2-217ENST00000498519 RIC3Q7Z5B4 369 aa17.71■□□□□ 0.43
SHANK2-217ENST00000498519 SULF1Q8IWU6 871 aa17.71■□□□□ 0.43
SHANK2-217ENST00000498519 ZBTB38Q8NAP3 1195 aaPredicted RBP17.71■□□□□ 0.43
SHANK2-217ENST00000498519 GBA2Q9HCG7 927 aaPredicted RBP17.71■□□□□ 0.43
SHANK2-217ENST00000498519 SAGE1Q9NXZ1 904 aa17.71■□□□□ 0.43
SHANK2-217ENST00000498519 PODXL2Q9NZ53 605 aa17.71■□□□□ 0.43
SHANK2-217ENST00000498519 POLLQ9UGP5 575 aa17.71■□□□□ 0.43
SHANK2-217ENST00000498519 TBC1D10BQ4KMP7 808 aaPredicted RBP17.7■□□□□ 0.42
SHANK2-217ENST00000498519 DUSP27Q5VZP5 1158 aa17.7■□□□□ 0.42
SHANK2-217ENST00000498519 REM2Q8IYK8 340 aaPredicted RBP17.7■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.5 ms