RNA–Protein interactions for RNA: ENST00000497498.1

CBX3-208, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 922 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-208ENST00000497498 A0A0A0MRY4 1105 aa7.53□□□□□ -1.2
CBX3-208ENST00000497498 ZBTB42B2RXF5 422 aa7.53□□□□□ -1.2
CBX3-208ENST00000497498 PRMT3O60678 531 aa7.53□□□□□ -1.2
CBX3-208ENST00000497498 RGS9O75916 674 aaPredicted RBP7.53□□□□□ -1.2
CBX3-208ENST00000497498 ATG7O95352 703 aa7.53□□□□□ -1.2
CBX3-208ENST00000497498 DHX32Q7L7V1 743 aaKnown RBP7.53□□□□□ -1.2
CBX3-208ENST00000497498 STK32AQ8WU08 396 aa7.53□□□□□ -1.2
CBX3-208ENST00000497498 COL26A1Q96A83 441 aa7.53□□□□□ -1.2
CBX3-208ENST00000497498 FRRS1LQ9P0K9 344 aa7.53□□□□□ -1.2
CBX3-208ENST00000497498 SASH3O75995 380 aa7.52□□□□□ -1.21
CBX3-208ENST00000497498 ELNP15502 786 aa7.52□□□□□ -1.21
CBX3-208ENST00000497498 ITGB7P26010 798 aa7.52□□□□□ -1.21
CBX3-208ENST00000497498 KRT25Q7Z3Z0 450 aa7.52□□□□□ -1.21
CBX3-208ENST00000497498 FAM35AQ86V20 835 aa7.52□□□□□ -1.21
CBX3-208ENST00000497498 TREML1Q86YW5 311 aa7.52□□□□□ -1.21
CBX3-208ENST00000497498 ZMYND15Q9H091 742 aa7.52□□□□□ -1.21
CBX3-208ENST00000497498 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP7.51□□□□□ -1.21
CBX3-208ENST00000497498 RARAP10276 462 aa7.51□□□□□ -1.21
CBX3-208ENST00000497498 SELPP16109 830 aa7.51□□□□□ -1.21
CBX3-208ENST00000497498 RAC1P63000 192 aa7.51□□□□□ -1.21
CBX3-208ENST00000497498 GPLD1P80108 840 aa7.51□□□□□ -1.21
CBX3-208ENST00000497498 TTC9Q92623 222 aa7.51□□□□□ -1.21
CBX3-208ENST00000497498 LPIN3Q9BQK8 851 aa7.51□□□□□ -1.21
CBX3-208ENST00000497498 TPSG1Q9NRR2 321 aa7.51□□□□□ -1.21
CBX3-208ENST00000497498 C9orf172C9J069 976 aa7.5□□□□□ -1.21
CBX3-208ENST00000497498 XYLBO75191 536 aa7.5□□□□□ -1.21
CBX3-208ENST00000497498 CPB1P15086 417 aa7.5□□□□□ -1.21
CBX3-208ENST00000497498 NRLP54845 237 aa7.5□□□□□ -1.21
CBX3-208ENST00000497498 GRIK5Q16478 980 aa7.5□□□□□ -1.21
CBX3-208ENST00000497498 RSPO4Q2I0M5 234 aaPredicted RBP7.5□□□□□ -1.21
CBX3-208ENST00000497498 NKAPLQ5M9Q1 402 aa7.5□□□□□ -1.21
CBX3-208ENST00000497498 PERM1Q5SV97 790 aa7.5□□□□□ -1.21
CBX3-208ENST00000497498 LENG1Q96BZ8 264 aaPredicted RBP7.5□□□□□ -1.21
CBX3-208ENST00000497498 SAP130Q9H0E3 1048 aa7.5□□□□□ -1.21
CBX3-208ENST00000497498 SEMA6BQ9H3T3 888 aa7.5□□□□□ -1.21
CBX3-208ENST00000497498 TLR7Q9NYK1 1049 aaKnown RBP7.5□□□□□ -1.21
CBX3-208ENST00000497498 USP20Q9Y2K6 914 aa7.5□□□□□ -1.21
CBX3-208ENST00000497498 KCNMB2Q9Y691 235 aa7.5□□□□□ -1.21
CBX3-208ENST00000497498 ADGRE1Q14246 886 aa7.49□□□□□ -1.21
CBX3-208ENST00000497498 TMEM164Q5U3C3 297 aa7.49□□□□□ -1.21
CBX3-208ENST00000497498 MSL1Q68DK7 614 aa7.49□□□□□ -1.21
CBX3-208ENST00000497498 C16orf46Q6P387 395 aa7.49□□□□□ -1.21
CBX3-208ENST00000497498 ETFBKMTQ8IXQ9 262 aa7.49□□□□□ -1.21
CBX3-208ENST00000497498 DMRTC2Q8IXT2 367 aaPredicted RBP7.49□□□□□ -1.21
CBX3-208ENST00000497498 RGL4Q8IZJ4 473 aa7.49□□□□□ -1.21
CBX3-208ENST00000497498 FMR1NBQ8N0W7 255 aaPredicted RBP7.49□□□□□ -1.21
CBX3-208ENST00000497498 CXXC1Q9P0U4 656 aaPredicted RBP7.49□□□□□ -1.21
CBX3-208ENST00000497498 BRD2P25440 801 aaKnown RBP7.48□□□□□ -1.21
CBX3-208ENST00000497498 ARID4AP29374 1257 aaPredicted RBP7.48□□□□□ -1.21
CBX3-208ENST00000497498 MBTPS1Q14703 1052 aa7.48□□□□□ -1.21
CBX3-208ENST00000497498 CMTR1Q8N1G2 835 aaKnown RBP7.48□□□□□ -1.21
CBX3-208ENST00000497498 DTWD1Q8N5C7 304 aa7.48□□□□□ -1.21
CBX3-208ENST00000497498 TNFRSF10BO14763 440 aa7.47□□□□□ -1.21
CBX3-208ENST00000497498 HOXD8P13378 290 aaPredicted RBP7.47□□□□□ -1.21
CBX3-208ENST00000497498 NRG1Q02297 640 aaPredicted RBP7.47□□□□□ -1.21
CBX3-208ENST00000497498 MLLT1Q03111 559 aaPredicted RBP7.47□□□□□ -1.21
CBX3-208ENST00000497498 PLAURQ03405 335 aa7.47□□□□□ -1.21
CBX3-208ENST00000497498 FAM26DQ5JW98 314 aa7.47□□□□□ -1.21
CBX3-208ENST00000497498 XP32Q5T750 250 aa7.47□□□□□ -1.21
CBX3-208ENST00000497498 ELMSAN1Q6PJG2 1045 aa7.47□□□□□ -1.21
CBX3-208ENST00000497498 CAPN12Q6ZSI9 719 aa7.47□□□□□ -1.21
CBX3-208ENST00000497498 CLP1Q92989 425 aaKnown RBP7.47□□□□□ -1.21
CBX3-208ENST00000497498 PBXIP1Q96AQ6 731 aa7.47□□□□□ -1.21
CBX3-208ENST00000497498 PTCD1O75127 700 aaKnown RBP7.46□□□□□ -1.22
CBX3-208ENST00000497498 SHISA2Q6UWI4 295 aa7.46□□□□□ -1.22
CBX3-208ENST00000497498 FBXO11Q86XK2 927 aa7.46□□□□□ -1.22
CBX3-208ENST00000497498 MMP20O60882 483 aa7.45□□□□□ -1.22
CBX3-208ENST00000497498 SOX18P35713 384 aa7.45□□□□□ -1.22
CBX3-208ENST00000497498 HFE2Q6ZVN8 426 aa7.45□□□□□ -1.22
CBX3-208ENST00000497498 TXNRD3Q86VQ6 643 aa7.45□□□□□ -1.22
CBX3-208ENST00000497498 Q8N3U1 123 aa7.45□□□□□ -1.22
CBX3-208ENST00000497498 SMG9Q9H0W8 520 aaKnown RBP7.45□□□□□ -1.22
CBX3-208ENST00000497498 SERPINA10Q9UK55 444 aa7.45□□□□□ -1.22
CBX3-208ENST00000497498 LOC102724428A0A0B4J2F2 783 aa7.44□□□□□ -1.22
CBX3-208ENST00000497498 DYRK3O43781 588 aa7.44□□□□□ -1.22
CBX3-208ENST00000497498 PSAPP07602 524 aa7.44□□□□□ -1.22
CBX3-208ENST00000497498 SIK1P57059 783 aa7.44□□□□□ -1.22
CBX3-208ENST00000497498 TRIP4Q15650 581 aaPredicted RBP7.44□□□□□ -1.22
CBX3-208ENST00000497498 WFDC8Q8IUA0 241 aa7.44□□□□□ -1.22
CBX3-208ENST00000497498 CCDC97Q96F63 343 aaPredicted RBP7.44□□□□□ -1.22
CBX3-208ENST00000497498 MKNK1Q9BUB5 465 aa7.44□□□□□ -1.22
CBX3-208ENST00000497498 SLAIN2Q9P270 581 aa7.44□□□□□ -1.22
CBX3-208ENST00000497498 EIF2AK2P19525 551 aaKnown RBP7.43□□□□□ -1.22
CBX3-208ENST00000497498 NAA30Q147X3 362 aaPredicted RBP7.43□□□□□ -1.22
CBX3-208ENST00000497498 NLRP13Q86W25 1043 aa7.43□□□□□ -1.22
CBX3-208ENST00000497498 FAM13BQ9NYF5 915 aa7.43□□□□□ -1.22
CBX3-208ENST00000497498 J3QW42 95 aa7.42□□□□□ -1.22
CBX3-208ENST00000497498 H2AFB1P0C5Y9 115 aa7.42□□□□□ -1.22
CBX3-208ENST00000497498 H2AFB2P0C5Z0 115 aa7.42□□□□□ -1.22
CBX3-208ENST00000497498 PIK3R5Q8WYR1 880 aa7.42□□□□□ -1.22
CBX3-208ENST00000497498 PLD4Q96BZ4 506 aa7.42□□□□□ -1.22
CBX3-208ENST00000497498 SSBP4Q9BWG4 385 aaPredicted RBP7.42□□□□□ -1.22
CBX3-208ENST00000497498 STIM2Q9P246 746 aa7.42□□□□□ -1.22
CBX3-208ENST00000497498 DEAF1O75398 565 aaPredicted RBP7.41□□□□□ -1.22
CBX3-208ENST00000497498 ZAP70P43403 619 aa7.41□□□□□ -1.22
CBX3-208ENST00000497498 NSUN5Q96P11 429 aaKnown RBP7.41□□□□□ -1.22
CBX3-208ENST00000497498 USP21Q9UK80 565 aa7.41□□□□□ -1.22
CBX3-208ENST00000497498 UBAP1LF5GYI3 381 aa7.4□□□□□ -1.22
CBX3-208ENST00000497498 ZBTB39O15060 712 aa7.4□□□□□ -1.22
CBX3-208ENST00000497498 GHRHP01286 108 aa7.4□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms