RNA–Protein interactions for RNA: ENST00000497210.5

CTPS1-211, Transcript of CTP synthase 1, humanhuman

TSL 3

Gene CTPS1, Length 463 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTPS1-211ENST00000497210 EP400Q96L91 3159 aa12.44□□□□□ -0.42
CTPS1-211ENST00000497210 PALLDQ8WX93 1383 aa12.44□□□□□ -0.42
CTPS1-211ENST00000497210 HMGB2P26583 209 aaKnown RBP12.44□□□□□ -0.42
CTPS1-211ENST00000497210 EIF4A1P60842 406 aaKnown RBP12.44□□□□□ -0.42
CTPS1-211ENST00000497210 MRPL50Q8N5N7 158 aaKnown RBP12.44□□□□□ -0.42
CTPS1-211ENST00000497210 PROCA1Q8NCQ7 364 aaPredicted RBP12.44□□□□□ -0.42
CTPS1-211ENST00000497210 PIGBQ92521 554 aa12.44□□□□□ -0.42
CTPS1-211ENST00000497210 MIS18AQ9NYP9 233 aa12.44□□□□□ -0.42
CTPS1-211ENST00000497210 RCAN3Q9UKA8 241 aa12.44□□□□□ -0.42
CTPS1-211ENST00000497210 HEG1Q9ULI3 1381 aa12.43□□□□□ -0.42
CTPS1-211ENST00000497210 KIF16BQ96L93 1317 aa12.43□□□□□ -0.42
CTPS1-211ENST00000497210 TNS1Q9HBL0 1735 aaKnown RBP12.43□□□□□ -0.42
CTPS1-211ENST00000497210 GCGRP47871 477 aa12.43□□□□□ -0.42
CTPS1-211ENST00000497210 ALDH1L2Q3SY69 923 aa12.43□□□□□ -0.42
CTPS1-211ENST00000497210 NUTM1Q86Y26 1132 aa12.43□□□□□ -0.42
CTPS1-211ENST00000497210 SLF2Q8IX21 1173 aa12.43□□□□□ -0.42
CTPS1-211ENST00000497210 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.43□□□□□ -0.42
CTPS1-211ENST00000497210 STK31Q9BXU1 1019 aa12.43□□□□□ -0.42
CTPS1-211ENST00000497210 LY75O60449 1722 aa12.42□□□□□ -0.42
CTPS1-211ENST00000497210 TJP1Q07157 1748 aa12.42□□□□□ -0.42
CTPS1-211ENST00000497210 CACNA1FO60840 1977 aa12.42□□□□□ -0.42
CTPS1-211ENST00000497210 SNRPA1P09661 255 aaKnown RBP12.42□□□□□ -0.42
CTPS1-211ENST00000497210 SLC39A6Q13433 755 aa12.42□□□□□ -0.42
CTPS1-211ENST00000497210 LIMD1Q9UGP4 676 aa12.42□□□□□ -0.42
CTPS1-211ENST00000497210 KDM4AO75164 1064 aa12.41□□□□□ -0.42
CTPS1-211ENST00000497210 CANXP27824 592 aaKnown RBP12.41□□□□□ -0.42
CTPS1-211ENST00000497210 HDGFL1Q5TGJ6 251 aa12.41□□□□□ -0.42
CTPS1-211ENST00000497210 CCDC30Q5VVM6 783 aa12.41□□□□□ -0.42
CTPS1-211ENST00000497210 TEX13AQ9BXU3 409 aaPredicted RBP12.41□□□□□ -0.42
CTPS1-211ENST00000497210 SMC4Q9NTJ3 1288 aa12.41□□□□□ -0.42
CTPS1-211ENST00000497210 ERBB4Q15303 1308 aa12.4□□□□□ -0.42
CTPS1-211ENST00000497210 COL5A3P25940 1745 aaPredicted RBP12.4□□□□□ -0.42
CTPS1-211ENST00000497210 MOXD2PA6NHM9 499 aa12.4□□□□□ -0.42
CTPS1-211ENST00000497210 SPTLC1O15269 473 aa12.4□□□□□ -0.42
CTPS1-211ENST00000497210 GIGYF1O75420 1035 aaPredicted RBP12.4□□□□□ -0.42
CTPS1-211ENST00000497210 SLC4A3P48751 1232 aa12.4□□□□□ -0.42
CTPS1-211ENST00000497210 RSBN1LQ6PCB5 846 aaPredicted RBP12.4□□□□□ -0.42
CTPS1-211ENST00000497210 RIC3Q7Z5B4 369 aa12.4□□□□□ -0.42
CTPS1-211ENST00000497210 C8orf58Q8NAV2 365 aa12.4□□□□□ -0.42
CTPS1-211ENST00000497210 ZNF496Q96IT1 587 aaPredicted RBP12.4□□□□□ -0.42
CTPS1-211ENST00000497210 ATG3Q9NT62 314 aa12.4□□□□□ -0.42
CTPS1-211ENST00000497210 ASAP1Q9ULH1 1129 aa12.4□□□□□ -0.42
CTPS1-211ENST00000497210 ELL2O00472 640 aaPredicted RBP12.39□□□□□ -0.43
CTPS1-211ENST00000497210 PTCD1O75127 700 aaKnown RBP12.39□□□□□ -0.43
CTPS1-211ENST00000497210 TUSC1Q2TAM9 212 aa12.39□□□□□ -0.43
CTPS1-211ENST00000497210 FAM182BQ5T319 152 aa12.39□□□□□ -0.43
CTPS1-211ENST00000497210 ANKRD13DQ6ZTN6 518 aa12.39□□□□□ -0.43
CTPS1-211ENST00000497210 KRTAP3-3Q9BYR6 98 aa12.39□□□□□ -0.43
CTPS1-211ENST00000497210 KRTAP3-2Q9BYR7 98 aa12.39□□□□□ -0.43
CTPS1-211ENST00000497210 KCNQ3O43525 872 aa12.38□□□□□ -0.43
CTPS1-211ENST00000497210 KCNQ2O43526 872 aa12.38□□□□□ -0.43
CTPS1-211ENST00000497210 VAMP4O75379 141 aa12.38□□□□□ -0.43
CTPS1-211ENST00000497210 STARD3NLO95772 234 aa12.38□□□□□ -0.43
CTPS1-211ENST00000497210 NEFLP07196 543 aa12.38□□□□□ -0.43
CTPS1-211ENST00000497210 GJA5P36382 358 aa12.38□□□□□ -0.43
CTPS1-211ENST00000497210 RARSP54136 660 aaKnown RBP12.38□□□□□ -0.43
CTPS1-211ENST00000497210 USP46P62068 366 aa12.38□□□□□ -0.43
CTPS1-211ENST00000497210 KRT24Q2M2I5 525 aa12.38□□□□□ -0.43
CTPS1-211ENST00000497210 TSPYL6Q8N831 410 aa12.38□□□□□ -0.43
CTPS1-211ENST00000497210 RREB1Q92766 1687 aa12.38□□□□□ -0.43
CTPS1-211ENST00000497210 LOC102724428A0A0B4J2F2 783 aa12.37□□□□□ -0.43
CTPS1-211ENST00000497210 HOXA2O43364 376 aa12.37□□□□□ -0.43
CTPS1-211ENST00000497210 TRIM37O94972 964 aa12.37□□□□□ -0.43
CTPS1-211ENST00000497210 SIK1P57059 783 aa12.37□□□□□ -0.43
CTPS1-211ENST00000497210 SF3B2Q13435 895 aaKnown RBP12.37□□□□□ -0.43
CTPS1-211ENST00000497210 DBF4Q9UBU7 674 aaPredicted RBP12.37□□□□□ -0.43
CTPS1-211ENST00000497210 PTPRCP08575 1304 aa12.37□□□□□ -0.43
CTPS1-211ENST00000497210 IPO8O15397 1037 aaKnown RBP12.36□□□□□ -0.43
CTPS1-211ENST00000497210 RNF40O75150 1001 aa12.36□□□□□ -0.43
CTPS1-211ENST00000497210 NDUFV2P19404 249 aa12.36□□□□□ -0.43
CTPS1-211ENST00000497210 EIF2S2P20042 333 aaKnown RBP12.36□□□□□ -0.43
CTPS1-211ENST00000497210 RRP1P56182 461 aaKnown RBP12.36□□□□□ -0.43
CTPS1-211ENST00000497210 LRCH3Q96II8 777 aa12.36□□□□□ -0.43
CTPS1-211ENST00000497210 N4BP2Q86UW6 1770 aaPredicted RBP12.35□□□□□ -0.43
CTPS1-211ENST00000497210 PXDNLA1KZ92 1463 aa12.35□□□□□ -0.43
CTPS1-211ENST00000497210 TAF1LQ8IZX4 1826 aa12.35□□□□□ -0.43
CTPS1-211ENST00000497210 CFHP08603 1231 aa12.35□□□□□ -0.43
CTPS1-211ENST00000497210 ATP6V1AP38606 617 aa12.35□□□□□ -0.43
CTPS1-211ENST00000497210 SLC27A3Q5K4L6 730 aa12.35□□□□□ -0.43
CTPS1-211ENST00000497210 NPM2Q86SE8 214 aaKnown RBP12.35□□□□□ -0.43
CTPS1-211ENST00000497210 SSH1Q8WYL5 1049 aa12.35□□□□□ -0.43
CTPS1-211ENST00000497210 BCL2L13Q9BXK5 485 aa12.35□□□□□ -0.43
CTPS1-211ENST00000497210 HYPKQ9NX55 129 aa12.35□□□□□ -0.43
CTPS1-211ENST00000497210 CCNL1Q9UK58 526 aaPredicted RBP12.35□□□□□ -0.43
CTPS1-211ENST00000497210 DDX58O95786 925 aaKnown RBP12.34□□□□□ -0.43
CTPS1-211ENST00000497210 FTSJ3Q8IY81 847 aaKnown RBP12.34□□□□□ -0.43
CTPS1-211ENST00000497210 DDX21Q9NR30 783 aaKnown RBP eCLIP12.34□□□□□ -0.43
CTPS1-211ENST00000497210 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.34□□□□□ -0.43
CTPS1-211ENST00000497210 CHPF2Q9P2E5 772 aa12.34□□□□□ -0.43
CTPS1-211ENST00000497210 C4BP0C0L5 1744 aa12.34□□□□□ -0.43
CTPS1-211ENST00000497210 ZKSCAN2Q63HK3 967 aa12.33□□□□□ -0.44
CTPS1-211ENST00000497210 PPP2R2DQ66LE6 453 aa12.33□□□□□ -0.44
CTPS1-211ENST00000497210 DNAJC10Q8IXB1 793 aa12.33□□□□□ -0.44
CTPS1-211ENST00000497210 NECTIN2Q92692 538 aa12.33□□□□□ -0.44
CTPS1-211ENST00000497210 FRAT1Q92837 279 aaPredicted RBP12.33□□□□□ -0.44
CTPS1-211ENST00000497210 API5Q9BZZ5 524 aaKnown RBP12.33□□□□□ -0.44
CTPS1-211ENST00000497210 CNTNAP4Q9C0A0 1308 aa12.33□□□□□ -0.44
CTPS1-211ENST00000497210 PLSCR1O15162 318 aa12.32□□□□□ -0.44
CTPS1-211ENST00000497210 BCAR3O75815 825 aa12.32□□□□□ -0.44
CTPS1-211ENST00000497210 APBA3O96018 575 aa12.32□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 10.1 ms