RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 C11orf16Q9NQ32 467 aa7.06□□□□□ -1.28
VPS26A-208ENST00000497022 CPB1P15086 417 aa7.05□□□□□ -1.28
VPS26A-208ENST00000497022 YBX3P16989 372 aaKnown RBP eCLIP7.05□□□□□ -1.28
VPS26A-208ENST00000497022 CD97P48960 835 aa7.05□□□□□ -1.28
VPS26A-208ENST00000497022 RTN1Q16799 776 aa7.05□□□□□ -1.28
VPS26A-208ENST00000497022 PERM1Q5SV97 790 aa7.05□□□□□ -1.28
VPS26A-208ENST00000497022 TSEN2Q8NCE0 465 aaKnown RBP7.05□□□□□ -1.28
VPS26A-208ENST00000497022 TRPM4Q8TD43 1214 aa7.05□□□□□ -1.28
VPS26A-208ENST00000497022 RBM19Q9Y4C8 960 aaKnown RBP7.05□□□□□ -1.28
VPS26A-208ENST00000497022 DLL1O00548 723 aa7.04□□□□□ -1.28
VPS26A-208ENST00000497022 DKK1O94907 266 aa7.04□□□□□ -1.28
VPS26A-208ENST00000497022 ELMSAN1Q6PJG2 1045 aa7.04□□□□□ -1.28
VPS26A-208ENST00000497022 DCAF11Q8TEB1 546 aa7.04□□□□□ -1.28
VPS26A-208ENST00000497022 ZNF594Q96JF6 807 aaPredicted RBP7.04□□□□□ -1.28
VPS26A-208ENST00000497022 AKTIPQ9H8T0 292 aa7.04□□□□□ -1.28
VPS26A-208ENST00000497022 DMGDHQ9UI17 866 aaKnown RBP7.04□□□□□ -1.28
VPS26A-208ENST00000497022 ATAD2Q6PL18 1390 aa7.04□□□□□ -1.28
VPS26A-208ENST00000497022 RASA1P20936 1047 aa7.03□□□□□ -1.28
VPS26A-208ENST00000497022 ARID4AP29374 1257 aaPredicted RBP7.03□□□□□ -1.28
VPS26A-208ENST00000497022 IRAK1P51617 712 aa7.03□□□□□ -1.28
VPS26A-208ENST00000497022 GPLD1P80108 840 aa7.03□□□□□ -1.28
VPS26A-208ENST00000497022 KANK4Q5T7N3 995 aaPredicted RBP7.03□□□□□ -1.28
VPS26A-208ENST00000497022 DHX32Q7L7V1 743 aaKnown RBP7.03□□□□□ -1.28
VPS26A-208ENST00000497022 TMEM130Q8N3G9 435 aa7.03□□□□□ -1.28
VPS26A-208ENST00000497022 MRPL18Q9H0U6 180 aaKnown RBP7.03□□□□□ -1.28
VPS26A-208ENST00000497022 SRA1Q9HD15 236 aaKnown RBP7.03□□□□□ -1.28
VPS26A-208ENST00000497022 GSC2O15499 205 aa7.02□□□□□ -1.29
VPS26A-208ENST00000497022 COBLO75128 1261 aa7.02□□□□□ -1.29
VPS26A-208ENST00000497022 DEAF1O75398 565 aaPredicted RBP7.02□□□□□ -1.29
VPS26A-208ENST00000497022 LMOD1P29536 600 aaPredicted RBP7.02□□□□□ -1.29
VPS26A-208ENST00000497022 SSTR4P31391 388 aa7.02□□□□□ -1.29
VPS26A-208ENST00000497022 ZMYND15Q9H091 742 aa7.02□□□□□ -1.29
VPS26A-208ENST00000497022 GTF3C3Q9Y5Q9 886 aa7.02□□□□□ -1.29
VPS26A-208ENST00000497022 KIAA1324LA8MWY0 1029 aaPredicted RBP7.01□□□□□ -1.29
VPS26A-208ENST00000497022 SCG3Q8WXD2 468 aaKnown RBP7.01□□□□□ -1.29
VPS26A-208ENST00000497022 NGLY1Q96IV0 654 aa7.01□□□□□ -1.29
VPS26A-208ENST00000497022 ZBTB42B2RXF5 422 aa7□□□□□ -1.29
VPS26A-208ENST00000497022 PTCD1O75127 700 aaKnown RBP7□□□□□ -1.29
VPS26A-208ENST00000497022 GRNP28799 593 aaKnown RBP7□□□□□ -1.29
VPS26A-208ENST00000497022 INPP5BP32019 993 aa7□□□□□ -1.29
VPS26A-208ENST00000497022 PLAURQ03405 335 aa7□□□□□ -1.29
VPS26A-208ENST00000497022 PTK7Q13308 1070 aa7□□□□□ -1.29
VPS26A-208ENST00000497022 CRTC2Q53ET0 693 aaPredicted RBP7□□□□□ -1.29
VPS26A-208ENST00000497022 CFAP70Q5T0N1 1121 aa7□□□□□ -1.29
VPS26A-208ENST00000497022 LARP1Q6PKG0 1096 aaKnown RBP7□□□□□ -1.29
VPS26A-208ENST00000497022 Q6ZS46 218 aa7□□□□□ -1.29
VPS26A-208ENST00000497022 MAP4K3Q8IVH8 894 aa7□□□□□ -1.29
VPS26A-208ENST00000497022 VRTNQ9H8Y1 702 aa7□□□□□ -1.29
VPS26A-208ENST00000497022 ZFATQ9P243 1243 aa7□□□□□ -1.29
VPS26A-208ENST00000497022 BCS1LQ9Y276 419 aa7□□□□□ -1.29
VPS26A-208ENST00000497022 F8W735 103 aaPredicted RBP6.99□□□□□ -1.29
VPS26A-208ENST00000497022 NRLP54845 237 aa6.99□□□□□ -1.29
VPS26A-208ENST00000497022 SEC13P55735 322 aa6.99□□□□□ -1.29
VPS26A-208ENST00000497022 SMG9Q9H0W8 520 aaKnown RBP6.99□□□□□ -1.29
VPS26A-208ENST00000497022 FAM196BA6NMK8 535 aa6.98□□□□□ -1.29
VPS26A-208ENST00000497022 RARAP10276 462 aa6.98□□□□□ -1.29
VPS26A-208ENST00000497022 IDH3AP50213 366 aa6.98□□□□□ -1.29
VPS26A-208ENST00000497022 ARSDP51689 593 aa6.98□□□□□ -1.29
VPS26A-208ENST00000497022 DPYDQ12882 1025 aa6.98□□□□□ -1.29
VPS26A-208ENST00000497022 CHMP7Q8WUX9 453 aaPredicted RBP6.98□□□□□ -1.29
VPS26A-208ENST00000497022 USP17L15C9J2P7 530 aa6.97□□□□□ -1.29
VPS26A-208ENST00000497022 USP17L10C9JJH3 530 aa6.97□□□□□ -1.29
VPS26A-208ENST00000497022 USP17L13C9JLJ4 530 aa6.97□□□□□ -1.29
VPS26A-208ENST00000497022 USP17L12C9JPN9 530 aa6.97□□□□□ -1.29
VPS26A-208ENST00000497022 USP17L11C9JVI0 530 aa6.97□□□□□ -1.29
VPS26A-208ENST00000497022 USP17L21D6R901 530 aa6.97□□□□□ -1.29
VPS26A-208ENST00000497022 USP17L18D6R9N7 530 aa6.97□□□□□ -1.29
VPS26A-208ENST00000497022 USP17L22D6RA61 530 aa6.97□□□□□ -1.29
VPS26A-208ENST00000497022 USP17L17D6RBQ6 530 aa6.97□□□□□ -1.29
VPS26A-208ENST00000497022 USP17L19D6RCP7 530 aa6.97□□□□□ -1.29
VPS26A-208ENST00000497022 USP17L20D6RJB6 530 aa6.97□□□□□ -1.29
VPS26A-208ENST00000497022 USP17L24Q0WX57 530 aa6.97□□□□□ -1.29
VPS26A-208ENST00000497022 ANKMY2Q8IV38 441 aa6.97□□□□□ -1.29
VPS26A-208ENST00000497022 IFT43Q96FT9 208 aa6.97□□□□□ -1.29
VPS26A-208ENST00000497022 RAXQ9Y2V3 346 aa6.97□□□□□ -1.29
VPS26A-208ENST00000497022 IGLV1-40P01703 118 aa6.96□□□□□ -1.3
VPS26A-208ENST00000497022 TAL1P17542 331 aaPredicted RBP6.96□□□□□ -1.3
VPS26A-208ENST00000497022 EIF2AK2P19525 551 aaKnown RBP6.96□□□□□ -1.3
VPS26A-208ENST00000497022 IGFBP4P22692 258 aa6.96□□□□□ -1.3
VPS26A-208ENST00000497022 TARSP26639 723 aaKnown RBP6.96□□□□□ -1.3
VPS26A-208ENST00000497022 GP2P55259 537 aaKnown RBP6.96□□□□□ -1.3
VPS26A-208ENST00000497022 MLLT1Q03111 559 aaPredicted RBP6.96□□□□□ -1.3
VPS26A-208ENST00000497022 KRT25Q7Z3Z0 450 aa6.96□□□□□ -1.3
VPS26A-208ENST00000497022 OAS3Q9Y6K5 1087 aaKnown RBP6.96□□□□□ -1.3
VPS26A-208ENST00000497022 ALX3O95076 343 aa6.95□□□□□ -1.3
VPS26A-208ENST00000497022 RFX1P22670 979 aa6.95□□□□□ -1.3
VPS26A-208ENST00000497022 CDCA8Q53HL2 280 aa6.95□□□□□ -1.3
VPS26A-208ENST00000497022 HINFPQ9BQA5 517 aa6.95□□□□□ -1.3
VPS26A-208ENST00000497022 SASH3O75995 380 aa6.94□□□□□ -1.3
VPS26A-208ENST00000497022 EGFRP00533 1210 aa6.94□□□□□ -1.3
VPS26A-208ENST00000497022 INTS5Q6P9B9 1019 aaKnown RBP6.94□□□□□ -1.3
VPS26A-208ENST00000497022 CACTIN-AS1Q8N1I8 211 aa6.94□□□□□ -1.3
VPS26A-208ENST00000497022 PLD4Q96BZ4 506 aa6.94□□□□□ -1.3
VPS26A-208ENST00000497022 ARXQ96QS3 562 aa6.94□□□□□ -1.3
VPS26A-208ENST00000497022 TLR7Q9NYK1 1049 aaKnown RBP6.94□□□□□ -1.3
VPS26A-208ENST00000497022 RNF114Q9Y508 228 aa6.94□□□□□ -1.3
VPS26A-208ENST00000497022 ARID1BQ8NFD5 2236 aaPredicted RBP6.94□□□□□ -1.3
VPS26A-208ENST00000497022 LGR5O75473 907 aa6.93□□□□□ -1.3
VPS26A-208ENST00000497022 MED26O95402 600 aa6.93□□□□□ -1.3
VPS26A-208ENST00000497022 HOXD8P13378 290 aaPredicted RBP6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms