RNA–Protein interactions for RNA: ENST00000496906.1

RGP1-202, Transcript of RGP1 homolog, RAB6A GEF complex partner 1, humanhuman

TSL 5

Gene RGP1, Length 1,586 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGP1-202ENST00000496906 HMMRO75330 724 aa22.78■■□□□ 1.24
RGP1-202ENST00000496906 SF3B3Q15393 1217 aaKnown RBP22.78■■□□□ 1.24
RGP1-202ENST00000496906 CCDC136Q96JN2 1154 aa22.78■■□□□ 1.24
RGP1-202ENST00000496906 NLRP3Q96P20 1036 aa22.78■■□□□ 1.24
RGP1-202ENST00000496906 CHMP3Q9Y3E7 222 aa22.78■■□□□ 1.24
RGP1-202ENST00000496906 FAM161AQ3B820 660 aa22.77■■□□□ 1.24
RGP1-202ENST00000496906 B4GALNT3Q6L9W6 998 aa22.77■■□□□ 1.24
RGP1-202ENST00000496906 IGHDP01880 384 aa22.76■■□□□ 1.23
RGP1-202ENST00000496906 CCDC152Q4G0S7 254 aa22.76■■□□□ 1.23
RGP1-202ENST00000496906 CCDC85AQ96PX6 553 aaPredicted RBP22.76■■□□□ 1.23
RGP1-202ENST00000496906 SGIP1Q9BQI5 828 aa22.76■■□□□ 1.23
RGP1-202ENST00000496906 RWDD1Q9H446 243 aaPredicted RBP22.76■■□□□ 1.23
RGP1-202ENST00000496906 GREM2Q9H772 168 aa22.76■■□□□ 1.23
RGP1-202ENST00000496906 RTL9Q8NET4 1388 aa22.76■■□□□ 1.23
RGP1-202ENST00000496906 POLD1P28340 1107 aa22.76■■□□□ 1.23
RGP1-202ENST00000496906 RFX5P48382 616 aaPredicted RBP22.76■■□□□ 1.23
RGP1-202ENST00000496906 BRIP1Q9BX63 1249 aa22.76■■□□□ 1.23
RGP1-202ENST00000496906 ANKRD31Q8N7Z5 1873 aa22.75■■□□□ 1.23
RGP1-202ENST00000496906 C10orf71Q711Q0 1435 aa22.74■■□□□ 1.23
RGP1-202ENST00000496906 KLRG2A4D1S0 409 aaPredicted RBP22.74■■□□□ 1.23
RGP1-202ENST00000496906 CRY2Q49AN0 593 aa22.74■■□□□ 1.23
RGP1-202ENST00000496906 ITGA6P23229 1130 aa22.73■■□□□ 1.23
RGP1-202ENST00000496906 PTGER2P43116 358 aa22.73■■□□□ 1.23
RGP1-202ENST00000496906 IFIT5Q13325 482 aaKnown RBP22.73■■□□□ 1.23
RGP1-202ENST00000496906 CCDC57Q2TAC2 916 aa22.73■■□□□ 1.23
RGP1-202ENST00000496906 PTPN12Q05209 780 aaKnown RBP22.72■■□□□ 1.23
RGP1-202ENST00000496906 KDM2BQ8NHM5 1336 aa22.72■■□□□ 1.23
RGP1-202ENST00000496906 ANKRD18BA2A2Z9 1011 aa22.72■■□□□ 1.23
RGP1-202ENST00000496906 KLHDC4Q8TBB5 520 aa22.72■■□□□ 1.23
RGP1-202ENST00000496906 DCTPP1Q9H773 170 aa22.72■■□□□ 1.23
RGP1-202ENST00000496906 COPRSQ9NQ92 184 aa22.72■■□□□ 1.23
RGP1-202ENST00000496906 SEC31BQ9NQW1 1179 aa22.72■■□□□ 1.23
RGP1-202ENST00000496906 PA2G4Q9UQ80 394 aaKnown RBP22.72■■□□□ 1.23
RGP1-202ENST00000496906 PDE6BP35913 854 aa22.71■■□□□ 1.23
RGP1-202ENST00000496906 NOP58Q9Y2X3 529 aaKnown RBP22.7■■□□□ 1.22
RGP1-202ENST00000496906 CENPQQ7L2Z9 268 aaPredicted RBP22.69■■□□□ 1.22
RGP1-202ENST00000496906 SMC5Q8IY18 1101 aa22.69■■□□□ 1.22
RGP1-202ENST00000496906 ZNF594Q96JF6 807 aaPredicted RBP22.69■■□□□ 1.22
RGP1-202ENST00000496906 SPON1Q9HCB6 807 aa22.69■■□□□ 1.22
RGP1-202ENST00000496906 SURF6O75683 361 aaKnown RBP22.68■■□□□ 1.22
RGP1-202ENST00000496906 GCC1Q96CN9 775 aa22.68■■□□□ 1.22
RGP1-202ENST00000496906 EXOC6BQ9Y2D4 811 aa22.68■■□□□ 1.22
RGP1-202ENST00000496906 COL4A1P02462 1669 aa22.68■■□□□ 1.22
RGP1-202ENST00000496906 LRP5O75197 1615 aa22.68■■□□□ 1.22
RGP1-202ENST00000496906 SRGNP10124 158 aa22.67■■□□□ 1.22
RGP1-202ENST00000496906 TAF7LQ5H9L4 462 aa22.67■■□□□ 1.22
RGP1-202ENST00000496906 DDX46Q7L014 1031 aaKnown RBP22.67■■□□□ 1.22
RGP1-202ENST00000496906 RPGRQ92834 1020 aaKnown RBP22.67■■□□□ 1.22
RGP1-202ENST00000496906 CDC5LQ99459 802 aaKnown RBP22.67■■□□□ 1.22
RGP1-202ENST00000496906 COL11A2P13942 1736 aaPredicted RBP22.67■■□□□ 1.22
RGP1-202ENST00000496906 KIF13BQ9NQT8 1826 aa22.67■■□□□ 1.22
RGP1-202ENST00000496906 HOXA10P31260 410 aaPredicted RBP22.67■■□□□ 1.22
RGP1-202ENST00000496906 CELF1Q92879 486 aaKnown RBP22.66■■□□□ 1.22
RGP1-202ENST00000496906 SIL1Q9H173 461 aa22.66■■□□□ 1.22
RGP1-202ENST00000496906 PDZRN3Q9UPQ7 1066 aa22.66■■□□□ 1.22
RGP1-202ENST00000496906 RBM17Q96I25 401 aaKnown RBP22.65■■□□□ 1.22
RGP1-202ENST00000496906 FBXO3Q9UK99 471 aa22.65■■□□□ 1.22
RGP1-202ENST00000496906 EYA2O00167 538 aa22.64■■□□□ 1.22
RGP1-202ENST00000496906 CIAO1O76071 339 aa22.64■■□□□ 1.22
RGP1-202ENST00000496906 NPR1P16066 1061 aa22.64■■□□□ 1.22
RGP1-202ENST00000496906 IGHMBP2P38935 993 aaKnown RBP22.64■■□□□ 1.22
RGP1-202ENST00000496906 GRAPQ13588 217 aa22.64■■□□□ 1.22
RGP1-202ENST00000496906 HSP90AB4PQ58FF6 505 aa22.64■■□□□ 1.22
RGP1-202ENST00000496906 C2CD5Q86YS7 1000 aa22.64■■□□□ 1.22
RGP1-202ENST00000496906 ANKRD18AQ8IVF6 992 aa22.64■■□□□ 1.22
RGP1-202ENST00000496906 GRAPLQ8TC17 118 aaPredicted RBP22.64■■□□□ 1.22
RGP1-202ENST00000496906 PUS3Q9BZE2 481 aaKnown RBP22.64■■□□□ 1.22
RGP1-202ENST00000496906 H0YIN7 160 aa22.63■■□□□ 1.21
RGP1-202ENST00000496906 G3BP1Q13283 466 aaKnown RBP eCLIP22.63■■□□□ 1.21
RGP1-202ENST00000496906 LRRC24Q50LG9 513 aa22.63■■□□□ 1.21
RGP1-202ENST00000496906 ATG9AQ7Z3C6 839 aa22.63■■□□□ 1.21
RGP1-202ENST00000496906 MASTLQ96GX5 879 aa22.63■■□□□ 1.21
RGP1-202ENST00000496906 CRAMP1Q96RY5 1269 aa22.63■■□□□ 1.21
RGP1-202ENST00000496906 RAB11FIP3O75154 756 aa22.63■■□□□ 1.21
RGP1-202ENST00000496906 RPS8P62241 208 aaKnown RBP22.63■■□□□ 1.21
RGP1-202ENST00000496906 LDHAL6AQ6ZMR3 332 aa22.63■■□□□ 1.21
RGP1-202ENST00000496906 TAF1P21675 1872 aa22.62■■□□□ 1.21
RGP1-202ENST00000496906 CHRNA5P30532 468 aa22.62■■□□□ 1.21
RGP1-202ENST00000496906 OS9Q13438 667 aaPredicted RBP22.62■■□□□ 1.21
RGP1-202ENST00000496906 MPHOSPH8Q99549 860 aa22.62■■□□□ 1.21
RGP1-202ENST00000496906 IL15P40933 162 aaPredicted RBP22.61■■□□□ 1.21
RGP1-202ENST00000496906 STYK1Q6J9G0 422 aa22.61■■□□□ 1.21
RGP1-202ENST00000496906 ERC1Q8IUD2 1116 aa22.61■■□□□ 1.21
RGP1-202ENST00000496906 CNNM1Q9NRU3 951 aa22.61■■□□□ 1.21
RGP1-202ENST00000496906 BSDC1Q9NW68 430 aaPredicted RBP22.61■■□□□ 1.21
RGP1-202ENST00000496906 RIPOR2Q9Y4F9 1068 aa22.61■■□□□ 1.21
RGP1-202ENST00000496906 APBB1O00213 710 aa22.6■■□□□ 1.21
RGP1-202ENST00000496906 SASH1O94885 1247 aa22.6■■□□□ 1.21
RGP1-202ENST00000496906 TGFB2P61812 414 aa22.6■■□□□ 1.21
RGP1-202ENST00000496906 KIF1BPQ96EK5 621 aa22.6■■□□□ 1.21
RGP1-202ENST00000496906 CD2APQ9Y5K6 639 aa22.6■■□□□ 1.21
RGP1-202ENST00000496906 RHPN1Q8TCX5 695 aa22.59■■□□□ 1.21
RGP1-202ENST00000496906 LRRCC1Q9C099 1032 aa22.59■■□□□ 1.21
RGP1-202ENST00000496906 KIAA1551Q9HCM1 1747 aa22.59■■□□□ 1.21
RGP1-202ENST00000496906 SPEF2Q9C093 1822 aa22.59■■□□□ 1.21
RGP1-202ENST00000496906 ALDH1B1P30837 517 aa22.59■■□□□ 1.21
RGP1-202ENST00000496906 NUCB1Q02818 461 aa22.59■■□□□ 1.21
RGP1-202ENST00000496906 ANKRD45Q5TZF3 282 aa22.59■■□□□ 1.21
RGP1-202ENST00000496906 ZNF622Q969S3 477 aaKnown RBP eCLIP22.59■■□□□ 1.21
RGP1-202ENST00000496906 DLEC1Q9Y238 1755 aa22.59■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms