RNA–Protein interactions for RNA: ENST00000496424.2

LRMDA-208, Transcript of leucine rich melanocyte differentiation associated, humanhuman

TSL 2 BASIC

Gene LRMDA, Length 3,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRMDA-208ENST00000496424 GRIK3Q13003 919 aa7.91□□□□□ -1.14
LRMDA-208ENST00000496424 MPP3Q13368 585 aa7.91□□□□□ -1.14
LRMDA-208ENST00000496424 CC2D1AQ6P1N0 951 aaPredicted RBP7.91□□□□□ -1.14
LRMDA-208ENST00000496424 CWC27Q6UX04 472 aaKnown RBP7.91□□□□□ -1.14
LRMDA-208ENST00000496424 NANOGNBQ7Z5D8 188 aa7.91□□□□□ -1.14
LRMDA-208ENST00000496424 TSPYL2Q9H2G4 693 aaPredicted RBP7.91□□□□□ -1.14
LRMDA-208ENST00000496424 CARMIL1Q5VZK9 1371 aa7.91□□□□□ -1.14
LRMDA-208ENST00000496424 AQRO60306 1485 aaKnown RBP eCLIP7.91□□□□□ -1.14
LRMDA-208ENST00000496424 KANK1Q14678 1352 aa7.91□□□□□ -1.14
LRMDA-208ENST00000496424 TNIKQ9UKE5 1360 aa7.91□□□□□ -1.14
LRMDA-208ENST00000496424 ANKRD65E5RJM6 399 aa7.91□□□□□ -1.14
LRMDA-208ENST00000496424 RPSAP08865 295 aaKnown RBP7.91□□□□□ -1.14
LRMDA-208ENST00000496424 PTPN14Q15678 1187 aa7.91□□□□□ -1.14
LRMDA-208ENST00000496424 WDR75Q8IWA0 830 aaKnown RBP7.91□□□□□ -1.14
LRMDA-208ENST00000496424 MPHOSPH6Q99547 160 aaKnown RBP7.91□□□□□ -1.14
LRMDA-208ENST00000496424 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.91□□□□□ -1.14
LRMDA-208ENST00000496424 ZSCAN21Q9Y5A6 473 aaPredicted RBP7.91□□□□□ -1.14
LRMDA-208ENST00000496424 CBFA2T2O43439 604 aa7.91□□□□□ -1.14
LRMDA-208ENST00000496424 DEUP1Q05D60 604 aa7.91□□□□□ -1.14
LRMDA-208ENST00000496424 SMC1AQ14683 1233 aaKnown RBP7.91□□□□□ -1.14
LRMDA-208ENST00000496424 RAB3GAP1Q15042 981 aa7.91□□□□□ -1.14
LRMDA-208ENST00000496424 Q4G0T1 1027 aa7.91□□□□□ -1.14
LRMDA-208ENST00000496424 CEP112Q8N8E3 955 aa7.91□□□□□ -1.14
LRMDA-208ENST00000496424 DTNBP1Q96EV8 351 aa7.91□□□□□ -1.14
LRMDA-208ENST00000496424 ATP8B1O43520 1251 aa7.9□□□□□ -1.14
LRMDA-208ENST00000496424 TPPPO94811 219 aa7.9□□□□□ -1.14
LRMDA-208ENST00000496424 PNMA6AP0CW24 399 aaPredicted RBP7.9□□□□□ -1.14
LRMDA-208ENST00000496424 PSMD7P51665 324 aa7.9□□□□□ -1.14
LRMDA-208ENST00000496424 DMPKQ09013 629 aa7.9□□□□□ -1.14
LRMDA-208ENST00000496424 CCDC184Q52MB2 194 aa7.9□□□□□ -1.14
LRMDA-208ENST00000496424 CEP85LQ5SZL2 805 aa7.9□□□□□ -1.14
LRMDA-208ENST00000496424 TMCO5AQ8N6Q1 288 aa7.9□□□□□ -1.14
LRMDA-208ENST00000496424 RSPH1Q8WYR4 309 aa7.9□□□□□ -1.14
LRMDA-208ENST00000496424 CUL7Q14999 1698 aa7.9□□□□□ -1.14
LRMDA-208ENST00000496424 ZNF24P17028 368 aa7.9□□□□□ -1.14
LRMDA-208ENST00000496424 KRT72Q14CN4 511 aa7.9□□□□□ -1.14
LRMDA-208ENST00000496424 SH3GL1Q99961 368 aa7.9□□□□□ -1.14
LRMDA-208ENST00000496424 RSPH9Q9H1X1 276 aaPredicted RBP7.9□□□□□ -1.14
LRMDA-208ENST00000496424 BATF3Q9NR55 127 aa7.9□□□□□ -1.14
LRMDA-208ENST00000496424 LMCD1Q9NZU5 365 aa7.9□□□□□ -1.14
LRMDA-208ENST00000496424 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.9□□□□□ -1.15
LRMDA-208ENST00000496424 PDE6BP35913 854 aa7.9□□□□□ -1.15
LRMDA-208ENST00000496424 ST5P78524 1137 aa7.9□□□□□ -1.15
LRMDA-208ENST00000496424 LRRC27Q9C0I9 530 aa7.9□□□□□ -1.15
LRMDA-208ENST00000496424 IFT140Q96RY7 1462 aa7.9□□□□□ -1.15
LRMDA-208ENST00000496424 CLIP1P30622 1438 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 CPP00450 1065 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 MSL3P1P0C860 447 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 VDRP11473 427 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 FOSL1P15407 271 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 CYP11B2P19099 503 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 EIF4G2P78344 907 aaKnown RBP eCLIP7.89□□□□□ -1.15
LRMDA-208ENST00000496424 FAM160A1Q05DH4 1040 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 RCN1Q15293 331 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 CAPRIN2Q6IMN6 1127 aaKnown RBP7.89□□□□□ -1.15
LRMDA-208ENST00000496424 CPLX2Q6PUV4 134 aaKnown RBP7.89□□□□□ -1.15
LRMDA-208ENST00000496424 CCDC121Q6ZUS5 278 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 CCDC50Q8IVM0 306 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 KCNB2Q92953 911 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 LRRCC1Q9C099 1032 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 HELLSQ9NRZ9 838 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 C6orf203Q9P0P8 240 aaPredicted RBP7.89□□□□□ -1.15
LRMDA-208ENST00000496424 ZNF215Q9UL58 517 aaPredicted RBP7.89□□□□□ -1.15
LRMDA-208ENST00000496424 PDZRN3Q9UPQ7 1066 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 CASTP20810 708 aaKnown RBP7.89□□□□□ -1.15
LRMDA-208ENST00000496424 CUL3Q13618 768 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 PSD3Q9NYI0 1048 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 VPS18Q9P253 973 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 COMMD10Q9Y6G5 202 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 ZNF608Q9ULD9 1512 aaPredicted RBP7.89□□□□□ -1.15
LRMDA-208ENST00000496424 ZSCAN9O15535 394 aaPredicted RBP7.89□□□□□ -1.15
LRMDA-208ENST00000496424 OPA1O60313 960 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 VIL1P09327 827 aaKnown RBP7.89□□□□□ -1.15
LRMDA-208ENST00000496424 MYCLP1P12525 358 aaPredicted RBP7.89□□□□□ -1.15
LRMDA-208ENST00000496424 STIP1P31948 543 aaKnown RBP7.89□□□□□ -1.15
LRMDA-208ENST00000496424 ADCY1Q08828 1119 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 WHAMMP3Q1A5X7 153 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 KIAA1524Q8TCG1 905 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 JAKMIP2Q96AA8 810 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 AGBL1Q96MI9 1066 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 IRF2BPLQ9H1B7 796 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 ZSCAN16Q9H4T2 348 aaPredicted RBP7.89□□□□□ -1.15
LRMDA-208ENST00000496424 HDAC6Q9UBN7 1215 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 SEL1LQ9UBV2 794 aa7.89□□□□□ -1.15
LRMDA-208ENST00000496424 EPB41L3Q9Y2J2 1087 aaPredicted RBP7.89□□□□□ -1.15
LRMDA-208ENST00000496424 DIS3Q9Y2L1 958 aaKnown RBP7.89□□□□□ -1.15
LRMDA-208ENST00000496424 RTN3O95197 1032 aaPredicted RBP7.88□□□□□ -1.15
LRMDA-208ENST00000496424 SLMAPQ14BN4 828 aa7.88□□□□□ -1.15
LRMDA-208ENST00000496424 SEPT7Q16181 437 aaKnown RBP7.88□□□□□ -1.15
LRMDA-208ENST00000496424 ARHGAP29Q52LW3 1261 aa7.88□□□□□ -1.15
LRMDA-208ENST00000496424 IQUBQ8NA54 791 aa7.88□□□□□ -1.15
LRMDA-208ENST00000496424 YIPF3Q9GZM5 350 aa7.88□□□□□ -1.15
LRMDA-208ENST00000496424 ADAMTS12P58397 1594 aa7.88□□□□□ -1.15
LRMDA-208ENST00000496424 RAB11FIP3O75154 756 aa7.88□□□□□ -1.15
LRMDA-208ENST00000496424 MATR3P43243 847 aaKnown RBP eCLIP7.88□□□□□ -1.153e-6■■■■□ 23.5
LRMDA-208ENST00000496424 RAB27AP51159 221 aa7.88□□□□□ -1.15
LRMDA-208ENST00000496424 RBM6P78332 1123 aaKnown RBP7.88□□□□□ -1.15
LRMDA-208ENST00000496424 ATP2B2Q01814 1243 aa7.88□□□□□ -1.15
LRMDA-208ENST00000496424 NAA30Q147X3 362 aaPredicted RBP7.88□□□□□ -1.15
LRMDA-208ENST00000496424 SYCP3Q8IZU3 236 aa7.88□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 135.3 ms