RNA–Protein interactions for RNA: ENST00000496136.5

ECHDC3-205, Transcript of enoyl-CoA hydratase domain containing 3, humanhuman

TSL 1 (best)

Gene ECHDC3, Length 1,767 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3-205ENST00000496136 IGHDP01880 384 aa27.18■■□□□ 1.94
ECHDC3-205ENST00000496136 POLD1P28340 1107 aa27.18■■□□□ 1.94
ECHDC3-205ENST00000496136 HDAC1Q13547 482 aaPredicted RBP27.18■■□□□ 1.94
ECHDC3-205ENST00000496136 POLA2Q14181 598 aa27.18■■□□□ 1.94
ECHDC3-205ENST00000496136 SGIP1Q9BQI5 828 aa27.18■■□□□ 1.94
ECHDC3-205ENST00000496136 BRIP1Q9BX63 1249 aa27.18■■□□□ 1.94
ECHDC3-205ENST00000496136 CCDC136Q96JN2 1154 aa27.17■■□□□ 1.94
ECHDC3-205ENST00000496136 RIC1Q4ADV7 1423 aa27.17■■□□□ 1.94
ECHDC3-205ENST00000496136 RWDD1Q9H446 243 aaPredicted RBP27.17■■□□□ 1.94
ECHDC3-205ENST00000496136 GREM2Q9H772 168 aa27.17■■□□□ 1.94
ECHDC3-205ENST00000496136 HMMRO75330 724 aa27.16■■□□□ 1.94
ECHDC3-205ENST00000496136 FAM161AQ3B820 660 aa27.16■■□□□ 1.94
ECHDC3-205ENST00000496136 CCDC152Q4G0S7 254 aa27.16■■□□□ 1.94
ECHDC3-205ENST00000496136 B4GALNT3Q6L9W6 998 aa27.16■■□□□ 1.94
ECHDC3-205ENST00000496136 KLRG2A4D1S0 409 aaPredicted RBP27.15■■□□□ 1.94
ECHDC3-205ENST00000496136 PTGER2P43116 358 aa27.15■■□□□ 1.94
ECHDC3-205ENST00000496136 RFX5P48382 616 aaPredicted RBP27.14■■□□□ 1.94
ECHDC3-205ENST00000496136 ANKRD31Q8N7Z5 1873 aa27.14■■□□□ 1.94
ECHDC3-205ENST00000496136 TNRC6CQ9HCJ0 1690 aaKnown RBP27.14■■□□□ 1.94
ECHDC3-205ENST00000496136 CCDC57Q2TAC2 916 aa27.14■■□□□ 1.93
ECHDC3-205ENST00000496136 ITGA6P23229 1130 aa27.13■■□□□ 1.93
ECHDC3-205ENST00000496136 IFIT5Q13325 482 aaKnown RBP27.13■■□□□ 1.93
ECHDC3-205ENST00000496136 CRY2Q49AN0 593 aa27.13■■□□□ 1.93
ECHDC3-205ENST00000496136 PDE6BP35913 854 aa27.12■■□□□ 1.93
ECHDC3-205ENST00000496136 SPON1Q9HCB6 807 aa27.12■■□□□ 1.93
ECHDC3-205ENST00000496136 KLHDC4Q8TBB5 520 aa27.12■■□□□ 1.93
ECHDC3-205ENST00000496136 SEC31BQ9NQW1 1179 aa27.12■■□□□ 1.93
ECHDC3-205ENST00000496136 RTL9Q8NET4 1388 aa27.12■■□□□ 1.93
ECHDC3-205ENST00000496136 PTPN12Q05209 780 aaKnown RBP27.11■■□□□ 1.93
ECHDC3-205ENST00000496136 ANKRD18BA2A2Z9 1011 aa27.1■■□□□ 1.93
ECHDC3-205ENST00000496136 DCTPP1Q9H773 170 aa27.1■■□□□ 1.93
ECHDC3-205ENST00000496136 COPRSQ9NQ92 184 aa27.1■■□□□ 1.93
ECHDC3-205ENST00000496136 PA2G4Q9UQ80 394 aaKnown RBP27.1■■□□□ 1.93
ECHDC3-205ENST00000496136 ZNF594Q96JF6 807 aaPredicted RBP27.09■■□□□ 1.93
ECHDC3-205ENST00000496136 TAF1P21675 1872 aa27.08■■□□□ 1.93
ECHDC3-205ENST00000496136 C10orf71Q711Q0 1435 aa27.08■■□□□ 1.93
ECHDC3-205ENST00000496136 SURF6O75683 361 aaKnown RBP27.07■■□□□ 1.92
ECHDC3-205ENST00000496136 SRGNP10124 158 aa27.07■■□□□ 1.92
ECHDC3-205ENST00000496136 DDX46Q7L014 1031 aaKnown RBP27.07■■□□□ 1.92
ECHDC3-205ENST00000496136 RPGRQ92834 1020 aaKnown RBP27.07■■□□□ 1.92
ECHDC3-205ENST00000496136 NOP58Q9Y2X3 529 aaKnown RBP27.07■■□□□ 1.92
ECHDC3-205ENST00000496136 HOXA10P31260 410 aaPredicted RBP27.07■■□□□ 1.92
ECHDC3-205ENST00000496136 KDM2BQ8NHM5 1336 aa27.06■■□□□ 1.92
ECHDC3-205ENST00000496136 EXOC6BQ9Y2D4 811 aa27.06■■□□□ 1.92
ECHDC3-205ENST00000496136 TAF7LQ5H9L4 462 aa27.05■■□□□ 1.92
ECHDC3-205ENST00000496136 SMC5Q8IY18 1101 aa27.05■■□□□ 1.92
ECHDC3-205ENST00000496136 CDC5LQ99459 802 aaKnown RBP27.05■■□□□ 1.92
ECHDC3-205ENST00000496136 SIL1Q9H173 461 aa27.05■■□□□ 1.92
ECHDC3-205ENST00000496136 H0YIN7 160 aa27.04■■□□□ 1.92
ECHDC3-205ENST00000496136 C2CD5Q86YS7 1000 aa27.04■■□□□ 1.92
ECHDC3-205ENST00000496136 CELF1Q92879 486 aaKnown RBP27.04■■□□□ 1.92
ECHDC3-205ENST00000496136 GCC1Q96CN9 775 aa27.04■■□□□ 1.92
ECHDC3-205ENST00000496136 KIF13BQ9NQT8 1826 aa27.04■■□□□ 1.92
ECHDC3-205ENST00000496136 RBM17Q96I25 401 aaKnown RBP27.04■■□□□ 1.92
ECHDC3-205ENST00000496136 NPR1P16066 1061 aa27.03■■□□□ 1.92
ECHDC3-205ENST00000496136 RPS8P62241 208 aaKnown RBP27.03■■□□□ 1.92
ECHDC3-205ENST00000496136 LDHAL6AQ6ZMR3 332 aa27.03■■□□□ 1.92
ECHDC3-205ENST00000496136 CENPQQ7L2Z9 268 aaPredicted RBP27.03■■□□□ 1.92
ECHDC3-205ENST00000496136 PUS3Q9BZE2 481 aaKnown RBP27.03■■□□□ 1.92
ECHDC3-205ENST00000496136 PDZRN3Q9UPQ7 1066 aa27.03■■□□□ 1.92
ECHDC3-205ENST00000496136 COL4A1P02462 1669 aa27.03■■□□□ 1.92
ECHDC3-205ENST00000496136 CHRNA5P30532 468 aa27.02■■□□□ 1.92
ECHDC3-205ENST00000496136 G3BP1Q13283 466 aaKnown RBP eCLIP27.02■■□□□ 1.92
ECHDC3-205ENST00000496136 ANKRD18AQ8IVF6 992 aa27.02■■□□□ 1.92
ECHDC3-205ENST00000496136 MASTLQ96GX5 879 aa27.02■■□□□ 1.92
ECHDC3-205ENST00000496136 CRAMP1Q96RY5 1269 aa27.02■■□□□ 1.92
ECHDC3-205ENST00000496136 EYA2O00167 538 aa27.02■■□□□ 1.92
ECHDC3-205ENST00000496136 IGHMBP2P38935 993 aaKnown RBP27.02■■□□□ 1.92
ECHDC3-205ENST00000496136 LRRC24Q50LG9 513 aa27.02■■□□□ 1.92
ECHDC3-205ENST00000496136 FBXO3Q9UK99 471 aa27.02■■□□□ 1.92
ECHDC3-205ENST00000496136 GRAPQ13588 217 aa27.01■■□□□ 1.91
ECHDC3-205ENST00000496136 HSP90AB4PQ58FF6 505 aa27.01■■□□□ 1.91
ECHDC3-205ENST00000496136 ATG9AQ7Z3C6 839 aa27.01■■□□□ 1.91
ECHDC3-205ENST00000496136 GRAPLQ8TC17 118 aaPredicted RBP27.01■■□□□ 1.91
ECHDC3-205ENST00000496136 MPHOSPH8Q99549 860 aa27.01■■□□□ 1.91
ECHDC3-205ENST00000496136 COL11A2P13942 1736 aaPredicted RBP27■■□□□ 1.91
ECHDC3-205ENST00000496136 PPP1R1BQ9UD71 204 aaPredicted RBP27■■□□□ 1.91
ECHDC3-205ENST00000496136 RIPOR2Q9Y4F9 1068 aa27■■□□□ 1.91
ECHDC3-205ENST00000496136 CD2APQ9Y5K6 639 aa27■■□□□ 1.91
ECHDC3-205ENST00000496136 CIAO1O76071 339 aa26.99■■□□□ 1.91
ECHDC3-205ENST00000496136 TGFB2P61812 414 aa26.99■■□□□ 1.91
ECHDC3-205ENST00000496136 ZNF622Q969S3 477 aaKnown RBP eCLIP26.99■■□□□ 1.91
ECHDC3-205ENST00000496136 BSDC1Q9NW68 430 aaPredicted RBP26.99■■□□□ 1.91
ECHDC3-205ENST00000496136 APBB1O00213 710 aa26.99■■□□□ 1.91
ECHDC3-205ENST00000496136 RAB11FIP3O75154 756 aa26.99■■□□□ 1.91
ECHDC3-205ENST00000496136 ALDH1B1P30837 517 aa26.99■■□□□ 1.91
ECHDC3-205ENST00000496136 OS9Q13438 667 aaPredicted RBP26.99■■□□□ 1.91
ECHDC3-205ENST00000496136 STYK1Q6J9G0 422 aa26.99■■□□□ 1.91
ECHDC3-205ENST00000496136 CNNM1Q9NRU3 951 aa26.99■■□□□ 1.91
ECHDC3-205ENST00000496136 A0A0G2JLW4 131 aa26.98■■□□□ 1.91
ECHDC3-205ENST00000496136 SASH1O94885 1247 aa26.98■■□□□ 1.91
ECHDC3-205ENST00000496136 BBOX1O75936 387 aa26.97■■□□□ 1.91
ECHDC3-205ENST00000496136 DPEP1P16444 411 aa26.97■■□□□ 1.91
ECHDC3-205ENST00000496136 IL15P40933 162 aaPredicted RBP26.97■■□□□ 1.91
ECHDC3-205ENST00000496136 KCNA3P22001 575 aa26.97■■□□□ 1.91
ECHDC3-205ENST00000496136 KLHL34Q8N239 644 aa26.97■■□□□ 1.91
ECHDC3-205ENST00000496136 SPEF2Q9C093 1822 aa26.96■■□□□ 1.91
ECHDC3-205ENST00000496136 ANKRD45Q5TZF3 282 aa26.96■■□□□ 1.91
ECHDC3-205ENST00000496136 ERC1Q8IUD2 1116 aa26.96■■□□□ 1.91
ECHDC3-205ENST00000496136 RHPN1Q8TCX5 695 aa26.96■■□□□ 1.91
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms