RNA–Protein interactions for RNA: ENST00000495756.5

ATG3-208, Transcript of autophagy related 3, humanhuman

TSL 1 (best)

Gene ATG3, Length 1,455 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG3-208ENST00000495756 KLRG2A4D1S0 409 aaPredicted RBP24.33■■□□□ 1.49
ATG3-208ENST00000495756 PDE6BP35913 854 aa24.32■■□□□ 1.48
ATG3-208ENST00000495756 ATP8B2P98198 1209 aa24.32■■□□□ 1.48
ATG3-208ENST00000495756 CRY2Q49AN0 593 aa24.32■■□□□ 1.48
ATG3-208ENST00000495756 CCDC152Q4G0S7 254 aa24.32■■□□□ 1.48
ATG3-208ENST00000495756 CCDC85AQ96PX6 553 aaPredicted RBP24.32■■□□□ 1.48
ATG3-208ENST00000495756 CHMP3Q9Y3E7 222 aa24.32■■□□□ 1.48
ATG3-208ENST00000495756 SRCAPQ6ZRS2 3230 aa24.32■■□□□ 1.48
ATG3-208ENST00000495756 FAM161AQ3B820 660 aa24.32■■□□□ 1.48
ATG3-208ENST00000495756 SIRT2Q8IXJ6 389 aa24.32■■□□□ 1.48
ATG3-208ENST00000495756 GREM2Q9H772 168 aa24.32■■□□□ 1.48
ATG3-208ENST00000495756 PNMA6EA0A0J9YXQ4 647 aa24.31■■□□□ 1.48
ATG3-208ENST00000495756 SRGAP3O43295 1099 aa24.31■■□□□ 1.48
ATG3-208ENST00000495756 KIF13BQ9NQT8 1826 aa24.31■■□□□ 1.48
ATG3-208ENST00000495756 RTL9Q8NET4 1388 aa24.3■■□□□ 1.48
ATG3-208ENST00000495756 SSH3Q8TE77 659 aa24.29■■□□□ 1.48
ATG3-208ENST00000495756 IFIT5Q13325 482 aaKnown RBP24.28■■□□□ 1.48
ATG3-208ENST00000495756 CCDC57Q2TAC2 916 aa24.28■■□□□ 1.48
ATG3-208ENST00000495756 HMMRO75330 724 aa24.27■■□□□ 1.48
ATG3-208ENST00000495756 SRGNP10124 158 aa24.27■■□□□ 1.48
ATG3-208ENST00000495756 ITGA6P23229 1130 aa24.27■■□□□ 1.48
ATG3-208ENST00000495756 POLA2Q14181 598 aa24.27■■□□□ 1.48
ATG3-208ENST00000495756 RPGRQ92834 1020 aaKnown RBP24.27■■□□□ 1.48
ATG3-208ENST00000495756 PDZRN3Q9UPQ7 1066 aa24.27■■□□□ 1.48
ATG3-208ENST00000495756 COL11A2P13942 1736 aaPredicted RBP24.27■■□□□ 1.48
ATG3-208ENST00000495756 RFX5P48382 616 aaPredicted RBP24.26■■□□□ 1.47
ATG3-208ENST00000495756 C2CD5Q86YS7 1000 aa24.26■■□□□ 1.47
ATG3-208ENST00000495756 SEC31BQ9NQW1 1179 aa24.26■■□□□ 1.47
ATG3-208ENST00000495756 ANKRD18BA2A2Z9 1011 aa24.26■■□□□ 1.47
ATG3-208ENST00000495756 H0YIN7 160 aa24.26■■□□□ 1.47
ATG3-208ENST00000495756 HOXA10P31260 410 aaPredicted RBP24.26■■□□□ 1.47
ATG3-208ENST00000495756 DDX46Q7L014 1031 aaKnown RBP24.26■■□□□ 1.47
ATG3-208ENST00000495756 CD2APQ9Y5K6 639 aa24.26■■□□□ 1.47
ATG3-208ENST00000495756 NPR1P16066 1061 aa24.25■■□□□ 1.47
ATG3-208ENST00000495756 HDAC1Q13547 482 aaPredicted RBP24.25■■□□□ 1.47
ATG3-208ENST00000495756 PPP1R1BQ9UD71 204 aaPredicted RBP24.25■■□□□ 1.47
ATG3-208ENST00000495756 CHRNA5P30532 468 aa24.24■■□□□ 1.47
ATG3-208ENST00000495756 RBM17Q96I25 401 aaKnown RBP24.24■■□□□ 1.47
ATG3-208ENST00000495756 PTPN12Q05209 780 aaKnown RBP24.23■■□□□ 1.47
ATG3-208ENST00000495756 KLHL34Q8N239 644 aa24.23■■□□□ 1.47
ATG3-208ENST00000495756 KLHDC4Q8TBB5 520 aa24.23■■□□□ 1.47
ATG3-208ENST00000495756 MASTLQ96GX5 879 aa24.23■■□□□ 1.47
ATG3-208ENST00000495756 CDC5LQ99459 802 aaKnown RBP24.23■■□□□ 1.47
ATG3-208ENST00000495756 TAF1P21675 1872 aa24.23■■□□□ 1.47
ATG3-208ENST00000495756 KIAA1551Q9HCM1 1747 aa24.22■■□□□ 1.47
ATG3-208ENST00000495756 TGFB2P61812 414 aa24.22■■□□□ 1.47
ATG3-208ENST00000495756 TAF7LQ5H9L4 462 aa24.22■■□□□ 1.47
ATG3-208ENST00000495756 ZNF594Q96JF6 807 aaPredicted RBP24.22■■□□□ 1.47
ATG3-208ENST00000495756 CRAMP1Q96RY5 1269 aa24.22■■□□□ 1.47
ATG3-208ENST00000495756 RWDD1Q9H446 243 aaPredicted RBP24.22■■□□□ 1.47
ATG3-208ENST00000495756 COPRSQ9NQ92 184 aa24.22■■□□□ 1.47
ATG3-208ENST00000495756 PPP4R2Q9NY27 417 aa24.22■■□□□ 1.47
ATG3-208ENST00000495756 COL4A1P02462 1669 aa24.22■■□□□ 1.47
ATG3-208ENST00000495756 STYK1Q6J9G0 422 aa24.21■■□□□ 1.47
ATG3-208ENST00000495756 CELF1Q92879 486 aaKnown RBP24.21■■□□□ 1.47
ATG3-208ENST00000495756 PA2G4Q9UQ80 394 aaKnown RBP24.21■■□□□ 1.47
ATG3-208ENST00000495756 DLEC1Q9Y238 1755 aa24.21■■□□□ 1.47
ATG3-208ENST00000495756 A0A0G2JLW4 131 aa24.2■■□□□ 1.47
ATG3-208ENST00000495756 DPEP1P16444 411 aa24.2■■□□□ 1.47
ATG3-208ENST00000495756 GRAPQ13588 217 aa24.2■■□□□ 1.47
ATG3-208ENST00000495756 GRAPLQ8TC17 118 aaPredicted RBP24.2■■□□□ 1.47
ATG3-208ENST00000495756 ZNF622Q969S3 477 aaKnown RBP eCLIP24.2■■□□□ 1.479e-7■■■□□ 17.3
ATG3-208ENST00000495756 IGHDP01880 384 aa24.19■■□□□ 1.46
ATG3-208ENST00000495756 RPS8P62241 208 aaKnown RBP24.19■■□□□ 1.46
ATG3-208ENST00000495756 ANKRD18AQ8IVF6 992 aa24.19■■□□□ 1.46
ATG3-208ENST00000495756 GTF3C3Q9Y5Q9 886 aa24.19■■□□□ 1.46
ATG3-208ENST00000495756 KCNA3P22001 575 aa24.19■■□□□ 1.46
ATG3-208ENST00000495756 ALDH1B1P30837 517 aa24.19■■□□□ 1.46
ATG3-208ENST00000495756 IGHMBP2P38935 993 aaKnown RBP24.19■■□□□ 1.46
ATG3-208ENST00000495756 CCDC136Q96JN2 1154 aa24.19■■□□□ 1.46
ATG3-208ENST00000495756 NOP58Q9Y2X3 529 aaKnown RBP24.19■■□□□ 1.46
ATG3-208ENST00000495756 LRP5O75197 1615 aa24.18■■□□□ 1.46
ATG3-208ENST00000495756 SURF6O75683 361 aaKnown RBP24.18■■□□□ 1.46
ATG3-208ENST00000495756 LDHAL6AQ6ZMR3 332 aa24.18■■□□□ 1.46
ATG3-208ENST00000495756 FHDC1Q9C0D6 1143 aaPredicted RBP24.18■■□□□ 1.46
ATG3-208ENST00000495756 SIL1Q9H173 461 aa24.18■■□□□ 1.46
ATG3-208ENST00000495756 DCTPP1Q9H773 170 aa24.18■■□□□ 1.46
ATG3-208ENST00000495756 GOLGB1Q14789 3259 aaKnown RBP24.17■■□□□ 1.46
ATG3-208ENST00000495756 CNKSR1Q969H4 720 aa24.17■■□□□ 1.46
ATG3-208ENST00000495756 MPHOSPH8Q99549 860 aa24.17■■□□□ 1.46
ATG3-208ENST00000495756 SPEF2Q9C093 1822 aa24.17■■□□□ 1.46
ATG3-208ENST00000495756 EYA2O00167 538 aa24.16■■□□□ 1.46
ATG3-208ENST00000495756 BBOX1O75936 387 aa24.16■■□□□ 1.46
ATG3-208ENST00000495756 PUS3Q9BZE2 481 aaKnown RBP24.16■■□□□ 1.46
ATG3-208ENST00000495756 BSDC1Q9NW68 430 aaPredicted RBP24.16■■□□□ 1.46
ATG3-208ENST00000495756 FBXO3Q9UK99 471 aa24.16■■□□□ 1.46
ATG3-208ENST00000495756 EXOC6BQ9Y2D4 811 aa24.16■■□□□ 1.46
ATG3-208ENST00000495756 CIAO1O76071 339 aa24.15■■□□□ 1.46
ATG3-208ENST00000495756 LRRC24Q50LG9 513 aa24.15■■□□□ 1.46
ATG3-208ENST00000495756 B4GALNT3Q6L9W6 998 aa24.15■■□□□ 1.46
ATG3-208ENST00000495756 NLGN2Q8NFZ4 835 aa24.15■■□□□ 1.46
ATG3-208ENST00000495756 CNNM1Q9NRU3 951 aa24.15■■□□□ 1.46
ATG3-208ENST00000495756 G3BP1Q13283 466 aaKnown RBP eCLIP24.14■■□□□ 1.46
ATG3-208ENST00000495756 ATG9AQ7Z3C6 839 aa24.14■■□□□ 1.46
ATG3-208ENST00000495756 RIPOR2Q9Y4F9 1068 aa24.14■■□□□ 1.46
ATG3-208ENST00000495756 CACNA1SQ13698 1873 aa24.13■■□□□ 1.45
ATG3-208ENST00000495756 HSP90AB4PQ58FF6 505 aa24.13■■□□□ 1.45
ATG3-208ENST00000495756 PRPF40BQ6NWY9 871 aaKnown RBP24.13■■□□□ 1.45
ATG3-208ENST00000495756 PIM2Q9P1W9 311 aa24.13■■□□□ 1.45
ATG3-208ENST00000495756 PPEF1O14829 653 aaPredicted RBP24.13■■□□□ 1.45
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms