RNA–Protein interactions for RNA: ENST00000495693.1

EPHA4-213, Transcript of EPH receptor A4, humanhuman

TSL 3

Gene EPHA4, Length 588 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-213ENST00000495693 IGHDP01880 384 aa10.79□□□□□ -0.68
EPHA4-213ENST00000495693 RTL5Q5HYW3 569 aaPredicted RBP10.79□□□□□ -0.68
EPHA4-213ENST00000495693 AEBP1Q8IUX7 1158 aa10.79□□□□□ -0.68
EPHA4-213ENST00000495693 SMC5Q8IY18 1101 aa10.79□□□□□ -0.68
EPHA4-213ENST00000495693 STK31Q9BXU1 1019 aa10.79□□□□□ -0.68
EPHA4-213ENST00000495693 TSPYL4Q9UJ04 414 aa10.79□□□□□ -0.68
EPHA4-213ENST00000495693 HOXB7P09629 217 aa10.78□□□□□ -0.68
EPHA4-213ENST00000495693 MTHFSDQ2M296 383 aaKnown RBP10.78□□□□□ -0.68
EPHA4-213ENST00000495693 HELBQ8NG08 1087 aaPredicted RBP10.78□□□□□ -0.68
EPHA4-213ENST00000495693 PCMTD1Q96MG8 357 aaPredicted RBP10.78□□□□□ -0.68
EPHA4-213ENST00000495693 USP19O94966 1318 aa10.78□□□□□ -0.68
EPHA4-213ENST00000495693 C8orf34Q49A92 452 aa10.77□□□□□ -0.69
EPHA4-213ENST00000495693 CCDC30Q5VVM6 783 aa10.77□□□□□ -0.69
EPHA4-213ENST00000495693 INTS3Q68E01 1043 aaKnown RBP10.77□□□□□ -0.69
EPHA4-213ENST00000495693 CCDC24Q8N4L8 307 aa10.77□□□□□ -0.69
EPHA4-213ENST00000495693 THUMPD2Q9BTF0 503 aaKnown RBP10.77□□□□□ -0.69
EPHA4-213ENST00000495693 TRPM3Q9HCF6 1732 aaPredicted RBP10.77□□□□□ -0.69
EPHA4-213ENST00000495693 NPHP3Q7Z494 1330 aa10.77□□□□□ -0.69
EPHA4-213ENST00000495693 MSH6P52701 1360 aa10.77□□□□□ -0.69
EPHA4-213ENST00000495693 FAM83GA6ND36 823 aa10.76□□□□□ -0.69
EPHA4-213ENST00000495693 CCT4P50991 539 aaKnown RBP10.76□□□□□ -0.69
EPHA4-213ENST00000495693 KCNH2Q12809 1159 aa10.76□□□□□ -0.69
EPHA4-213ENST00000495693 TRIM32Q13049 653 aa10.76□□□□□ -0.69
EPHA4-213ENST00000495693 LAPTM4AQ15012 233 aa10.76□□□□□ -0.69
EPHA4-213ENST00000495693 PLEKHO1Q53GL0 409 aaPredicted RBP10.76□□□□□ -0.69
EPHA4-213ENST00000495693 ZNF697Q5TEC3 545 aa10.76□□□□□ -0.69
EPHA4-213ENST00000495693 IRX2Q9BZI1 471 aaPredicted RBP10.76□□□□□ -0.69
EPHA4-213ENST00000495693 PDZRN3Q9UPQ7 1066 aa10.76□□□□□ -0.69
EPHA4-213ENST00000495693 FAM208AQ9UK61 1670 aaKnown RBP10.76□□□□□ -0.69
EPHA4-213ENST00000495693 CAMTA1Q9Y6Y1 1673 aa10.76□□□□□ -0.69
EPHA4-213ENST00000495693 PXDNLA1KZ92 1463 aa10.75□□□□□ -0.69
EPHA4-213ENST00000495693 ZBTB7BO15156 539 aaPredicted RBP10.75□□□□□ -0.69
EPHA4-213ENST00000495693 HMMRO75330 724 aa10.75□□□□□ -0.69
EPHA4-213ENST00000495693 F12P00748 615 aaPredicted RBP10.75□□□□□ -0.69
EPHA4-213ENST00000495693 PRR20EP86478 221 aa10.75□□□□□ -0.69
EPHA4-213ENST00000495693 PRR20CP86479 221 aa10.75□□□□□ -0.69
EPHA4-213ENST00000495693 PRR20DP86480 221 aa10.75□□□□□ -0.69
EPHA4-213ENST00000495693 PRR20BP86481 221 aa10.75□□□□□ -0.69
EPHA4-213ENST00000495693 PRR20AP86496 221 aa10.75□□□□□ -0.69
EPHA4-213ENST00000495693 BECN1Q14457 450 aa10.75□□□□□ -0.69
EPHA4-213ENST00000495693 TAF7Q15545 349 aaPredicted RBP10.75□□□□□ -0.69
EPHA4-213ENST00000495693 MCM10Q7L590 875 aa10.75□□□□□ -0.69
EPHA4-213ENST00000495693 KRT28Q7Z3Y7 464 aa10.75□□□□□ -0.69
EPHA4-213ENST00000495693 RPAP2Q8IXW5 612 aaPredicted RBP10.75□□□□□ -0.69
EPHA4-213ENST00000495693 C8orf58Q8NAV2 365 aa10.75□□□□□ -0.69
EPHA4-213ENST00000495693 CACNA1FO60840 1977 aa10.74□□□□□ -0.69
EPHA4-213ENST00000495693 GCP02774 474 aa10.74□□□□□ -0.69
EPHA4-213ENST00000495693 DCTN1Q14203 1278 aa10.74□□□□□ -0.69
EPHA4-213ENST00000495693 AKAP4Q5JQC9 854 aa10.74□□□□□ -0.69
EPHA4-213ENST00000495693 C1orf141Q5JVX7 400 aa10.74□□□□□ -0.69
EPHA4-213ENST00000495693 NPM2Q86SE8 214 aaKnown RBP10.74□□□□□ -0.69
EPHA4-213ENST00000495693 ARHGEF25Q86VW2 580 aa10.74□□□□□ -0.69
EPHA4-213ENST00000495693 TSPYL6Q8N831 410 aa10.74□□□□□ -0.69
EPHA4-213ENST00000495693 HDAC5Q9UQL6 1122 aa10.74□□□□□ -0.69
EPHA4-213ENST00000495693 LMO7Q8WWI1 1683 aa10.73□□□□□ -0.69
EPHA4-213ENST00000495693 ALS2Q96Q42 1657 aa10.73□□□□□ -0.69
EPHA4-213ENST00000495693 WNT7BP56706 349 aa10.73□□□□□ -0.69
EPHA4-213ENST00000495693 NUCB1Q02818 461 aa10.73□□□□□ -0.69
EPHA4-213ENST00000495693 PTCRAQ6ISU1 281 aaPredicted RBP10.73□□□□□ -0.69
EPHA4-213ENST00000495693 TRIM67Q6ZTA4 783 aa10.73□□□□□ -0.69
EPHA4-213ENST00000495693 TMEM94Q12767 1356 aa10.73□□□□□ -0.69
EPHA4-213ENST00000495693 CEMIPQ8WUJ3 1361 aa10.73□□□□□ -0.69
EPHA4-213ENST00000495693 ELL2O00472 640 aaPredicted RBP10.72□□□□□ -0.69
EPHA4-213ENST00000495693 FOXO3O43524 673 aa10.72□□□□□ -0.69
EPHA4-213ENST00000495693 GDF9O60383 454 aa10.72□□□□□ -0.69
EPHA4-213ENST00000495693 TNNQ9UQP3 1299 aa10.72□□□□□ -0.69
EPHA4-213ENST00000495693 MED1Q15648 1581 aaPredicted RBP10.72□□□□□ -0.69
EPHA4-213ENST00000495693 GNAI3P08754 354 aa10.71□□□□□ -0.69
EPHA4-213ENST00000495693 TEFQ10587 303 aa10.71□□□□□ -0.69
EPHA4-213ENST00000495693 NUTM2GQ5VZR2 741 aa10.71□□□□□ -0.69
EPHA4-213ENST00000495693 TNS3Q68CZ2 1445 aa10.71□□□□□ -0.69
EPHA4-213ENST00000495693 CHD1LQ86WJ1 897 aa10.71□□□□□ -0.69
EPHA4-213ENST00000495693 UNC93B1Q9H1C4 597 aa10.71□□□□□ -0.69
EPHA4-213ENST00000495693 USP35Q9P2H5 1018 aa10.71□□□□□ -0.69
EPHA4-213ENST00000495693 NRG2O14511 850 aaPredicted RBP10.7□□□□□ -0.7
EPHA4-213ENST00000495693 RFC5P40937 340 aa10.7□□□□□ -0.7
EPHA4-213ENST00000495693 TSC1Q92574 1164 aa10.7□□□□□ -0.7
EPHA4-213ENST00000495693 LTV1Q96GA3 475 aaPredicted RBP10.7□□□□□ -0.7
EPHA4-213ENST00000495693 ORAI2Q96SN7 254 aa10.7□□□□□ -0.7
EPHA4-213ENST00000495693 PKD2L1Q9P0L9 805 aa10.7□□□□□ -0.7
EPHA4-213ENST00000495693 N4BP2Q86UW6 1770 aaPredicted RBP10.7□□□□□ -0.7
EPHA4-213ENST00000495693 WNT7AO00755 349 aa10.69□□□□□ -0.7
EPHA4-213ENST00000495693 HSP90AB1P08238 724 aaKnown RBP10.69□□□□□ -0.7
EPHA4-213ENST00000495693 CTDSPL2Q05D32 466 aa10.69□□□□□ -0.7
EPHA4-213ENST00000495693 BMP2KLQ5H9B9 411 aa10.69□□□□□ -0.7
EPHA4-213ENST00000495693 ANKRD44Q8N8A2 993 aa10.69□□□□□ -0.7
EPHA4-213ENST00000495693 ANKRD24Q8TF21 1146 aa10.69□□□□□ -0.7
EPHA4-213ENST00000495693 RGS12O14924 1447 aa10.68□□□□□ -0.7
EPHA4-213ENST00000495693 CPDO75976 1380 aa10.68□□□□□ -0.7
EPHA4-213ENST00000495693 GFRA3O60609 400 aa10.68□□□□□ -0.7
EPHA4-213ENST00000495693 TMEM259Q4ZIN3 620 aa10.68□□□□□ -0.7
EPHA4-213ENST00000495693 ZNF530Q6P9A1 599 aaPredicted RBP10.68□□□□□ -0.7
EPHA4-213ENST00000495693 RAPGEF4Q8WZA2 1011 aa10.68□□□□□ -0.7
EPHA4-213ENST00000495693 SPG7Q9UQ90 795 aa10.68□□□□□ -0.7
EPHA4-213ENST00000495693 KDM3BQ7LBC6 1761 aa10.67□□□□□ -0.7
EPHA4-213ENST00000495693 CTHP32929 405 aa10.67□□□□□ -0.7
EPHA4-213ENST00000495693 FLIIQ13045 1269 aa10.67□□□□□ -0.7
EPHA4-213ENST00000495693 HDGFL1Q5TGJ6 251 aa10.67□□□□□ -0.7
EPHA4-213ENST00000495693 NBPF6Q5VWK0 638 aa10.67□□□□□ -0.7
EPHA4-213ENST00000495693 CASC1Q6TDU7 716 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms