RNA–Protein interactions for RNA: ENST00000495677.1

COL1A1-209, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 3

Gene COL1A1, Length 594 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-209ENST00000495677 C3orf67Q6ZVT6 689 aa17.84■□□□□ 0.45
COL1A1-209ENST00000495677 ZBTB3Q9H5J0 574 aa17.84■□□□□ 0.45
COL1A1-209ENST00000495677 TCERG1O14776 1098 aaKnown RBP17.83■□□□□ 0.44
COL1A1-209ENST00000495677 CNGB1Q14028 1251 aaPredicted RBP17.83■□□□□ 0.44
COL1A1-209ENST00000495677 SLC51AQ86UW1 340 aa17.83■□□□□ 0.44
COL1A1-209ENST00000495677 ABCC4O15439 1325 aa17.82■□□□□ 0.44
COL1A1-209ENST00000495677 MYL6BP14649 208 aa17.82■□□□□ 0.44
COL1A1-209ENST00000495677 PPP2R1AP30153 589 aa17.82■□□□□ 0.44
COL1A1-209ENST00000495677 LRP10Q7Z4F1 713 aa17.82■□□□□ 0.44
COL1A1-209ENST00000495677 MPNDQ8N594 471 aa17.82■□□□□ 0.44
COL1A1-209ENST00000495677 LRRC37AA6NMS7 1700 aa17.81■□□□□ 0.44
COL1A1-209ENST00000495677 DPP8Q6V1X1 898 aaPredicted RBP17.81■□□□□ 0.44
COL1A1-209ENST00000495677 DPF2Q92785 391 aa17.81■□□□□ 0.44
COL1A1-209ENST00000495677 UTP14AQ9BVJ6 771 aaKnown RBP17.81■□□□□ 0.44
COL1A1-209ENST00000495677 BCL2L13Q9BXK5 485 aa17.81■□□□□ 0.44
COL1A1-209ENST00000495677 CNOT7Q9UIV1 285 aaKnown RBP17.81■□□□□ 0.44
COL1A1-209ENST00000495677 SAGE1Q9NXZ1 904 aa17.8■□□□□ 0.44
COL1A1-209ENST00000495677 H7C1D1 291 aa17.79■□□□□ 0.44
COL1A1-209ENST00000495677 NEFMP07197 916 aa17.79■□□□□ 0.44
COL1A1-209ENST00000495677 TMC4Q7Z404 712 aa17.79■□□□□ 0.44
COL1A1-209ENST00000495677 CCER1Q8TC90 406 aaPredicted RBP17.79■□□□□ 0.44
COL1A1-209ENST00000495677 TRPM4Q8TD43 1214 aa17.79■□□□□ 0.44
COL1A1-209ENST00000495677 CFAP44Q96MT7 982 aa17.79■□□□□ 0.44
COL1A1-209ENST00000495677 ZIC5Q96T25 663 aa17.79■□□□□ 0.44
COL1A1-209ENST00000495677 FAM155AB1AL88 458 aaPredicted RBP17.78■□□□□ 0.44
COL1A1-209ENST00000495677 RAD17O75943 681 aa17.78■□□□□ 0.44
COL1A1-209ENST00000495677 HUNKP57058 714 aa17.78■□□□□ 0.44
COL1A1-209ENST00000495677 PDIA6Q15084 440 aa17.78■□□□□ 0.44
COL1A1-209ENST00000495677 CCDC102AQ96A19 550 aa17.78■□□□□ 0.44
COL1A1-209ENST00000495677 PLEKHF1Q96S99 279 aa17.78■□□□□ 0.44
COL1A1-209ENST00000495677 ZNF408Q9H9D4 720 aa17.78■□□□□ 0.44
COL1A1-209ENST00000495677 YDJCA8MPS7 323 aa17.77■□□□□ 0.44
COL1A1-209ENST00000495677 RGMBQ6NW40 437 aa17.77■□□□□ 0.44
COL1A1-209ENST00000495677 DUOX1Q9NRD9 1551 aa17.77■□□□□ 0.44
COL1A1-209ENST00000495677 DDX60Q8IY21 1712 aaKnown RBP17.77■□□□□ 0.44
COL1A1-209ENST00000495677 GRAPQ13588 217 aa17.76■□□□□ 0.43
COL1A1-209ENST00000495677 HSP90AB3PQ58FF7 597 aa17.76■□□□□ 0.43
COL1A1-209ENST00000495677 USP48Q86UV5 1035 aa17.76■□□□□ 0.43
COL1A1-209ENST00000495677 GRAPLQ8TC17 118 aaPredicted RBP17.76■□□□□ 0.43
COL1A1-209ENST00000495677 DDX46Q7L014 1031 aaKnown RBP17.75■□□□□ 0.43
COL1A1-209ENST00000495677 MICALL2Q8IY33 904 aa17.75■□□□□ 0.43
COL1A1-209ENST00000495677 NFE2L2Q16236 605 aa17.74■□□□□ 0.43
COL1A1-209ENST00000495677 NLRP10Q86W26 655 aa17.74■□□□□ 0.43
COL1A1-209ENST00000495677 C2orf69Q8N8R5 385 aa17.74■□□□□ 0.43
COL1A1-209ENST00000495677 GBA2Q9HCG7 927 aaPredicted RBP17.74■□□□□ 0.43
COL1A1-209ENST00000495677 BABAM1Q9NWV8 329 aa17.74■□□□□ 0.43
COL1A1-209ENST00000495677 PSME4Q14997 1843 aa17.73■□□□□ 0.43
COL1A1-209ENST00000495677 SHTN1A0MZ66 631 aa17.73■□□□□ 0.43
COL1A1-209ENST00000495677 RPS12P25398 132 aaKnown RBP17.73■□□□□ 0.43
COL1A1-209ENST00000495677 REM2Q8IYK8 340 aaPredicted RBP17.73■□□□□ 0.43
COL1A1-209ENST00000495677 THUMPD2Q9BTF0 503 aaKnown RBP17.73■□□□□ 0.43
COL1A1-209ENST00000495677 PNNQ9H307 717 aaKnown RBP17.73■□□□□ 0.43
COL1A1-209ENST00000495677 SCN9AQ15858 1988 aa17.73■□□□□ 0.43
COL1A1-209ENST00000495677 PSMD14O00487 310 aa17.72■□□□□ 0.43
COL1A1-209ENST00000495677 HCLS1P14317 486 aaPredicted RBP17.72■□□□□ 0.43
COL1A1-209ENST00000495677 KIF23Q02241 960 aaPredicted RBP17.72■□□□□ 0.43
COL1A1-209ENST00000495677 TCIRG1Q13488 830 aa17.72■□□□□ 0.43
COL1A1-209ENST00000495677 WASHC4Q2M389 1173 aa17.72■□□□□ 0.43
COL1A1-209ENST00000495677 SAMD7Q7Z3H4 446 aa17.72■□□□□ 0.43
COL1A1-209ENST00000495677 KRT26Q7Z3Y9 468 aa17.72■□□□□ 0.43
COL1A1-209ENST00000495677 RNF186Q9NXI6 227 aa17.72■□□□□ 0.43
COL1A1-209ENST00000495677 ZBTB12Q9Y330 459 aaPredicted RBP17.72■□□□□ 0.43
COL1A1-209ENST00000495677 SH3TC1Q8TE82 1336 aa17.72■□□□□ 0.43
COL1A1-209ENST00000495677 EIF2S2P20042 333 aaKnown RBP17.7■□□□□ 0.42
COL1A1-209ENST00000495677 COPS6Q7L5N1 327 aa17.7■□□□□ 0.42
COL1A1-209ENST00000495677 DCPSQ96C86 337 aaKnown RBP17.7■□□□□ 0.42
COL1A1-209ENST00000495677 TRMT112Q9UI30 125 aaKnown RBP17.7■□□□□ 0.42
COL1A1-209ENST00000495677 TRPA1O75762 1119 aa17.69■□□□□ 0.42
COL1A1-209ENST00000495677 SLC10A3P09131 477 aa17.69■□□□□ 0.42
COL1A1-209ENST00000495677 ZNF157P51786 506 aaPredicted RBP17.69■□□□□ 0.42
COL1A1-209ENST00000495677 SF3B3Q15393 1217 aaKnown RBP17.69■□□□□ 0.42
COL1A1-209ENST00000495677 PROSER3Q2NL68 480 aa17.69■□□□□ 0.42
COL1A1-209ENST00000495677 DLK2Q6UY11 383 aa17.69■□□□□ 0.42
COL1A1-209ENST00000495677 CSRNP1Q96S65 589 aa17.69■□□□□ 0.42
COL1A1-209ENST00000495677 TSPYL4Q9UJ04 414 aa17.69■□□□□ 0.42
COL1A1-209ENST00000495677 EGFRP00533 1210 aa17.68■□□□□ 0.42
COL1A1-209ENST00000495677 TBC1D10BQ4KMP7 808 aaPredicted RBP17.68■□□□□ 0.42
COL1A1-209ENST00000495677 NSFL1CQ9UNZ2 370 aaKnown RBP17.68■□□□□ 0.42
COL1A1-209ENST00000495677 PRPF38BQ5VTL8 546 aaKnown RBP17.67■□□□□ 0.42
COL1A1-209ENST00000495677 CTU1Q7Z7A3 348 aaKnown RBP17.67■□□□□ 0.42
COL1A1-209ENST00000495677 DBNDD1Q9H9R9 158 aa17.67■□□□□ 0.42
COL1A1-209ENST00000495677 POLLQ9UGP5 575 aa17.67■□□□□ 0.42
COL1A1-209ENST00000495677 ZNF609O15014 1411 aa17.66■□□□□ 0.42
COL1A1-209ENST00000495677 ANXA1P04083 346 aa17.66■□□□□ 0.42
COL1A1-209ENST00000495677 VIL1P09327 827 aaKnown RBP17.66■□□□□ 0.42
COL1A1-209ENST00000495677 PKN2Q16513 984 aaKnown RBP17.66■□□□□ 0.42
COL1A1-209ENST00000495677 XAGE3Q8WTP9 111 aa17.66■□□□□ 0.42
COL1A1-209ENST00000495677 EYA3Q99504 573 aa17.66■□□□□ 0.42
COL1A1-209ENST00000495677 RTL9Q8NET4 1388 aa17.66■□□□□ 0.42
COL1A1-209ENST00000495677 ADM5C9JUS6 153 aa17.65■□□□□ 0.42
COL1A1-209ENST00000495677 ECE2O60344 883 aa17.65■□□□□ 0.42
COL1A1-209ENST00000495677 SOX10P56693 466 aa17.65■□□□□ 0.42
COL1A1-209ENST00000495677 FKBP1BP68106 108 aa17.65■□□□□ 0.42
COL1A1-209ENST00000495677 SULF1Q8IWU6 871 aa17.65■□□□□ 0.42
COL1A1-209ENST00000495677 NECTIN2Q92692 538 aa17.65■□□□□ 0.42
COL1A1-209ENST00000495677 CELF1Q92879 486 aaKnown RBP17.65■□□□□ 0.42
COL1A1-209ENST00000495677 PAPPA2Q9BXP8 1791 aa17.64■□□□□ 0.41
COL1A1-209ENST00000495677 AIMP1Q12904 312 aaKnown RBP17.64■□□□□ 0.41
COL1A1-209ENST00000495677 KIF4BQ2VIQ3 1234 aa17.64■□□□□ 0.41
COL1A1-209ENST00000495677 KCNQ5Q9NR82 932 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms