RNA–Protein interactions for RNA: ENST00000495394.1

RPSA-209, Transcript of ribosomal protein SA, humanhuman

TSL 1 (best)

Gene RPSA, Length 2,058 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPSA-209ENST00000495394 HDGFP51858 240 aaKnown RBP11.04□□□□□ -0.64
RPSA-209ENST00000495394 KRT77Q7Z794 578 aa11.04□□□□□ -0.64
RPSA-209ENST00000495394 ANKLE2Q86XL3 938 aa11.04□□□□□ -0.64
RPSA-209ENST00000495394 CHCHD4Q8N4Q1 142 aa11.04□□□□□ -0.64
RPSA-209ENST00000495394 EID1Q9Y6B2 187 aa11.04□□□□□ -0.64
RPSA-209ENST00000495394 NINLQ9Y2I6 1382 aa11.04□□□□□ -0.64
RPSA-209ENST00000495394 RRM1P23921 792 aa11.04□□□□□ -0.64
RPSA-209ENST00000495394 ALDH1B1P30837 517 aa11.04□□□□□ -0.64
RPSA-209ENST00000495394 NBPF8Q3BBV2 869 aa11.04□□□□□ -0.64
RPSA-209ENST00000495394 LNPKQ9C0E8 428 aa11.04□□□□□ -0.64
RPSA-209ENST00000495394 VEZTQ9HBM0 779 aa11.04□□□□□ -0.64
RPSA-209ENST00000495394 NCKAP5LQ9HCH0 1330 aa11.03□□□□□ -0.64
RPSA-209ENST00000495394 VCAM1P19320 739 aa11.03□□□□□ -0.64
RPSA-209ENST00000495394 GABPB1Q06547 395 aaPredicted RBP11.03□□□□□ -0.64
RPSA-209ENST00000495394 TRAF1Q13077 416 aa11.03□□□□□ -0.64
RPSA-209ENST00000495394 DHX8Q14562 1220 aaKnown RBP11.03□□□□□ -0.64
RPSA-209ENST00000495394 FXNQ16595 210 aa11.03□□□□□ -0.64
RPSA-209ENST00000495394 TTC39BQ5VTQ0 682 aaPredicted RBP11.03□□□□□ -0.64
RPSA-209ENST00000495394 MSL1Q68DK7 614 aa11.03□□□□□ -0.64
RPSA-209ENST00000495394 SVIPQ8NHG7 77 aa11.03□□□□□ -0.64
RPSA-209ENST00000495394 PMFBP1Q8TBY8 1022 aa11.03□□□□□ -0.64
RPSA-209ENST00000495394 MPP4Q96JB8 637 aa11.03□□□□□ -0.64
RPSA-209ENST00000495394 AK7Q96M32 723 aa11.03□□□□□ -0.64
RPSA-209ENST00000495394 ZHX3Q9H4I2 956 aa11.03□□□□□ -0.64
RPSA-209ENST00000495394 HOXC10Q9NYD6 342 aa11.03□□□□□ -0.64
RPSA-209ENST00000495394 PIP4K2BP78356 416 aa11.02□□□□□ -0.64
RPSA-209ENST00000495394 IRX1P78414 480 aaPredicted RBP11.02□□□□□ -0.64
RPSA-209ENST00000495394 MECOMQ03112 1051 aa11.02□□□□□ -0.64
RPSA-209ENST00000495394 DCTN1Q14203 1278 aa11.02□□□□□ -0.64
RPSA-209ENST00000495394 PLEKHG6Q3KR16 790 aa11.02□□□□□ -0.64
RPSA-209ENST00000495394 ARHGEF25Q86VW2 580 aa11.02□□□□□ -0.64
RPSA-209ENST00000495394 UHMK1Q8TAS1 419 aaKnown RBP11.02□□□□□ -0.64
RPSA-209ENST00000495394 BLOC1S6Q9UL45 172 aa11.02□□□□□ -0.64
RPSA-209ENST00000495394 FSD2A1L4K1 749 aa11.02□□□□□ -0.65
RPSA-209ENST00000495394 SDE2Q6IQ49 451 aa11.02□□□□□ -0.65
RPSA-209ENST00000495394 GOLGA1Q92805 767 aa11.02□□□□□ -0.65
RPSA-209ENST00000495394 SLC45A1Q9Y2W3 748 aa11.02□□□□□ -0.65
RPSA-209ENST00000495394 CCDC7Q96M83 1385 aa11.01□□□□□ -0.65
RPSA-209ENST00000495394 NPHP4O75161 1426 aaPredicted RBP11.01□□□□□ -0.65
RPSA-209ENST00000495394 SLC27A2O14975 620 aa11.01□□□□□ -0.65
RPSA-209ENST00000495394 TRIM37O94972 964 aa11.01□□□□□ -0.65
RPSA-209ENST00000495394 LTKP29376 864 aa11.01□□□□□ -0.65
RPSA-209ENST00000495394 KCNV1Q6PIU1 500 aa11.01□□□□□ -0.65
RPSA-209ENST00000495394 SMARCC1Q92922 1105 aaPredicted RBP11.01□□□□□ -0.65
RPSA-209ENST00000495394 TATDN2Q93075 761 aa11.01□□□□□ -0.65
RPSA-209ENST00000495394 DEF6Q9H4E7 631 aa11.01□□□□□ -0.65
RPSA-209ENST00000495394 RSPH14Q9UHP6 348 aa11.01□□□□□ -0.65
RPSA-209ENST00000495394 ACAD8Q9UKU7 415 aa11.01□□□□□ -0.65
RPSA-209ENST00000495394 MYOM2P54296 1465 aa11.01□□□□□ -0.65
RPSA-209ENST00000495394 HSP90AB1P08238 724 aaKnown RBP11□□□□□ -0.65
RPSA-209ENST00000495394 IBSPP21815 317 aaPredicted RBP11□□□□□ -0.65
RPSA-209ENST00000495394 SLC7A5Q01650 507 aa11□□□□□ -0.65
RPSA-209ENST00000495394 CHAF1AQ13111 956 aaPredicted RBP11□□□□□ -0.65
RPSA-209ENST00000495394 FILIP1LQ4L180 1135 aa11□□□□□ -0.65
RPSA-209ENST00000495394 NDUFAF2Q8N183 169 aa11□□□□□ -0.65
RPSA-209ENST00000495394 KIAA1958Q8N8K9 716 aa11□□□□□ -0.65
RPSA-209ENST00000495394 SYAP1Q96A49 352 aaPredicted RBP11□□□□□ -0.65
RPSA-209ENST00000495394 CCDC34Q96HJ3 373 aa11□□□□□ -0.65
RPSA-209ENST00000495394 GINM1Q9NU53 330 aa11□□□□□ -0.65
RPSA-209ENST00000495394 ZNF652Q9Y2D9 606 aa11□□□□□ -0.65
RPSA-209ENST00000495394 SETBP1Q9Y6X0 1596 aa11□□□□□ -0.65
RPSA-209ENST00000495394 PLEKHG1Q9ULL1 1385 aa11□□□□□ -0.65
RPSA-209ENST00000495394 DYTNA2CJ06 578 aa11□□□□□ -0.65
RPSA-209ENST00000495394 ATG7O95352 703 aa11□□□□□ -0.65
RPSA-209ENST00000495394 CCDC159P0C7I6 412 aa11□□□□□ -0.65
RPSA-209ENST00000495394 WWC2Q6AWC2 1192 aa11□□□□□ -0.65
RPSA-209ENST00000495394 IQCEQ6IPM2 695 aa11□□□□□ -0.65
RPSA-209ENST00000495394 NLGN1Q8N2Q7 840 aa11□□□□□ -0.65
RPSA-209ENST00000495394 MIGA1Q8NAN2 632 aa11□□□□□ -0.65
RPSA-209ENST00000495394 RMDN2Q96LZ7 410 aa11□□□□□ -0.65
RPSA-209ENST00000495394 MKS1Q9NXB0 559 aa11□□□□□ -0.65
RPSA-209ENST00000495394 CWC15Q9P013 229 aaKnown RBP11□□□□□ -0.65
RPSA-209ENST00000495394 TCEAL9Q9UHQ7 104 aa11□□□□□ -0.65
RPSA-209ENST00000495394 DIP2AQ14689 1571 aa11□□□□□ -0.65
RPSA-209ENST00000495394 NRXN3Q9Y4C0 1643 aa11□□□□□ -0.65
RPSA-209ENST00000495394 SESN3P58005 492 aa10.99□□□□□ -0.65
RPSA-209ENST00000495394 ADCY2Q08462 1091 aa10.99□□□□□ -0.65
RPSA-209ENST00000495394 FMNL3Q8IVF7 1028 aa10.99□□□□□ -0.65
RPSA-209ENST00000495394 PLPP6Q8IY26 295 aa10.99□□□□□ -0.65
RPSA-209ENST00000495394 GIMAP1Q8WWP7 306 aa10.99□□□□□ -0.65
RPSA-209ENST00000495394 VMP1Q96GC9 406 aa10.99□□□□□ -0.65
RPSA-209ENST00000495394 CD248Q9HCU0 757 aa10.99□□□□□ -0.65
RPSA-209ENST00000495394 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.99□□□□□ -0.65
RPSA-209ENST00000495394 ZBED9Q6R2W3 1325 aa10.99□□□□□ -0.65
RPSA-209ENST00000495394 PLEKHG3A1L390 1219 aa10.99□□□□□ -0.65
RPSA-209ENST00000495394 BOLA2-SMG1P6H3BVE0 249 aa10.99□□□□□ -0.65
RPSA-209ENST00000495394 ATP6V1AP38606 617 aa10.99□□□□□ -0.65
RPSA-209ENST00000495394 TMED1Q13445 227 aa10.99□□□□□ -0.65
RPSA-209ENST00000495394 WAPLQ7Z5K2 1190 aa10.99□□□□□ -0.65
RPSA-209ENST00000495394 SPOCK2Q92563 424 aa10.99□□□□□ -0.65
RPSA-209ENST00000495394 COMMD8Q9NX08 183 aa10.99□□□□□ -0.65
RPSA-209ENST00000495394 IP6K2Q9UHH9 426 aa10.99□□□□□ -0.65
RPSA-209ENST00000495394 MAFFQ9ULX9 164 aa10.99□□□□□ -0.65
RPSA-209ENST00000495394 IKBKGQ9Y6K9 419 aa10.99□□□□□ -0.65
RPSA-209ENST00000495394 LAMC1P11047 1609 aa10.98□□□□□ -0.65
RPSA-209ENST00000495394 IMPDH2P12268 514 aa10.98□□□□□ -0.65
RPSA-209ENST00000495394 HOXD10P28358 340 aa10.98□□□□□ -0.65
RPSA-209ENST00000495394 KANK3Q6NY19 840 aa10.98□□□□□ -0.65
RPSA-209ENST00000495394 NCAPG2Q86XI2 1143 aa10.98□□□□□ -0.65
RPSA-209ENST00000495394 CENPTQ96BT3 561 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms