RNA–Protein interactions for RNA: ENST00000494829.1

RUNX1-217, Transcript of runt related transcription factor 1, humanhuman

TSL 1 (best)

Gene RUNX1, Length 3,622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RUNX1-217ENST00000494829 RUFY3Q7L099 469 aa6.98□□□□□ -1.29
RUNX1-217ENST00000494829 TCEANC2Q96MN5 208 aa6.98□□□□□ -1.29
RUNX1-217ENST00000494829 KCNQ2O43526 872 aa6.97□□□□□ -1.29
RUNX1-217ENST00000494829 CYP19A1P11511 503 aaPredicted RBP6.97□□□□□ -1.29
RUNX1-217ENST00000494829 GPTP24298 496 aa6.97□□□□□ -1.29
RUNX1-217ENST00000494829 CASC1Q6TDU7 716 aa6.97□□□□□ -1.29
RUNX1-217ENST00000494829 MARCH10Q8NA82 808 aaPredicted RBP6.97□□□□□ -1.29
RUNX1-217ENST00000494829 SYTL4Q96C24 671 aaPredicted RBP6.97□□□□□ -1.29
RUNX1-217ENST00000494829 PANK2Q9BZ23 570 aa6.97□□□□□ -1.29
RUNX1-217ENST00000494829 UBN2Q6ZU65 1347 aa6.97□□□□□ -1.29
RUNX1-217ENST00000494829 NUTM2BA6NNL0 878 aaPredicted RBP6.97□□□□□ -1.29
RUNX1-217ENST00000494829 NUTM2EB1AL46 878 aaPredicted RBP6.97□□□□□ -1.29
RUNX1-217ENST00000494829 NUTM2AQ8IVF1 878 aaPredicted RBP6.97□□□□□ -1.29
RUNX1-217ENST00000494829 CNTROBQ8N137 903 aa6.97□□□□□ -1.29
RUNX1-217ENST00000494829 TCHHQ07283 1943 aa6.97□□□□□ -1.29
RUNX1-217ENST00000494829 RPAP1Q9BWH6 1393 aaPredicted RBP6.97□□□□□ -1.29
RUNX1-217ENST00000494829 MED23Q9ULK4 1368 aa6.97□□□□□ -1.29
RUNX1-217ENST00000494829 ANKRD36CQ5JPF3 1778 aa6.97□□□□□ -1.29
RUNX1-217ENST00000494829 BAG4O95429 457 aaKnown RBP6.97□□□□□ -1.29
RUNX1-217ENST00000494829 ADORA1P30542 326 aa6.97□□□□□ -1.29
RUNX1-217ENST00000494829 SCARF1Q14162 830 aa6.97□□□□□ -1.29
RUNX1-217ENST00000494829 NECTIN1Q15223 517 aa6.97□□□□□ -1.29
RUNX1-217ENST00000494829 PRPF40BQ6NWY9 871 aaKnown RBP6.97□□□□□ -1.29
RUNX1-217ENST00000494829 CHMP3Q9Y3E7 222 aa6.97□□□□□ -1.29
RUNX1-217ENST00000494829 SPDYE2BA6NHP3 402 aa6.96□□□□□ -1.29
RUNX1-217ENST00000494829 SPDYE6P0CI01 402 aa6.96□□□□□ -1.29
RUNX1-217ENST00000494829 AK2P54819 239 aa6.96□□□□□ -1.29
RUNX1-217ENST00000494829 PIP4K2BP78356 416 aa6.96□□□□□ -1.29
RUNX1-217ENST00000494829 CUL4AQ13619 759 aa6.96□□□□□ -1.29
RUNX1-217ENST00000494829 SPDYE2Q495Y8 402 aa6.96□□□□□ -1.29
RUNX1-217ENST00000494829 PI16Q6UXB8 463 aa6.96□□□□□ -1.29
RUNX1-217ENST00000494829 DDX46Q7L014 1031 aaKnown RBP6.96□□□□□ -1.29
RUNX1-217ENST00000494829 NKX2-3Q8TAU0 364 aa6.96□□□□□ -1.29
RUNX1-217ENST00000494829 CWC25Q9NXE8 425 aaPredicted RBP6.96□□□□□ -1.29
RUNX1-217ENST00000494829 LAMA4Q16363 1823 aa6.96□□□□□ -1.29
RUNX1-217ENST00000494829 TAF1P21675 1872 aa6.96□□□□□ -1.29
RUNX1-217ENST00000494829 SPATA31A1Q5TZJ5 1347 aa6.96□□□□□ -1.29
RUNX1-217ENST00000494829 SNAP23O00161 211 aa6.96□□□□□ -1.3
RUNX1-217ENST00000494829 ITPK1Q13572 414 aa6.96□□□□□ -1.3
RUNX1-217ENST00000494829 VPS53Q5VIR6 699 aa6.96□□□□□ -1.3
RUNX1-217ENST00000494829 TBC1D2BQ9UPU7 963 aa6.96□□□□□ -1.3
RUNX1-217ENST00000494829 NWD2Q9ULI1 1742 aa6.96□□□□□ -1.3
RUNX1-217ENST00000494829 RIC1Q4ADV7 1423 aa6.96□□□□□ -1.3
RUNX1-217ENST00000494829 FOXD4L6Q3SYB3 417 aaPredicted RBP6.96□□□□□ -1.3
RUNX1-217ENST00000494829 HSP90AB4PQ58FF6 505 aa6.96□□□□□ -1.3
RUNX1-217ENST00000494829 FOXD4L3Q6VB84 417 aaPredicted RBP6.96□□□□□ -1.3
RUNX1-217ENST00000494829 SLC51AQ86UW1 340 aa6.96□□□□□ -1.3
RUNX1-217ENST00000494829 WTIPA6NIX2 430 aaPredicted RBP6.95□□□□□ -1.3
RUNX1-217ENST00000494829 HSP90AA1P07900 732 aaKnown RBP6.95□□□□□ -1.3
RUNX1-217ENST00000494829 TCIRG1Q13488 830 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 INTS5Q6P9B9 1019 aaKnown RBP6.95□□□□□ -1.3
RUNX1-217ENST00000494829 AMIGO3Q86WK7 504 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 JCADQ9P266 1359 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 ERBB4Q15303 1308 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 CCDC171Q6TFL3 1326 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 CASZ1Q86V15 1759 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 FSD2A1L4K1 749 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 FOXP2O15409 715 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 FAM182BQ5T319 152 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 ERC1Q8IUD2 1116 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 KCNB2Q92953 911 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 EVI5LQ96CN4 794 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 DNAJC2Q99543 621 aaKnown RBP6.95□□□□□ -1.3
RUNX1-217ENST00000494829 CHMP4AQ9BY43 222 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 SNRKQ9NRH2 765 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 CIZ1Q9ULV3 898 aaPredicted RBP6.95□□□□□ -1.3
RUNX1-217ENST00000494829 RBM8AQ9Y5S9 174 aaKnown RBP6.95□□□□□ -1.3
RUNX1-217ENST00000494829 AKAP11Q9UKA4 1901 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 SPEF2Q9C093 1822 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 HSP90AB3PQ58FF7 597 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 CLEC17AQ6ZS10 378 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 GPT2Q8TD30 523 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 MAP4K1Q92918 833 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 GREM2Q9H772 168 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 LMBRD1Q9NUN5 540 aa6.95□□□□□ -1.3
RUNX1-217ENST00000494829 DDX60Q8IY21 1712 aaKnown RBP6.94□□□□□ -1.3
RUNX1-217ENST00000494829 SLC27A2O14975 620 aa6.94□□□□□ -1.3
RUNX1-217ENST00000494829 ST18O60284 1047 aa6.94□□□□□ -1.3
RUNX1-217ENST00000494829 XRCC6P12956 609 aaKnown RBP eCLIP6.94□□□□□ -1.3
RUNX1-217ENST00000494829 ATP5JP18859 108 aa6.94□□□□□ -1.3
RUNX1-217ENST00000494829 CASTP20810 708 aaKnown RBP6.94□□□□□ -1.3
RUNX1-217ENST00000494829 ANAPC15P60006 121 aa6.94□□□□□ -1.3
RUNX1-217ENST00000494829 CREB3L3Q68CJ9 461 aa6.94□□□□□ -1.3
RUNX1-217ENST00000494829 MCTP1Q6DN14 999 aa6.94□□□□□ -1.3
RUNX1-217ENST00000494829 NLRP10Q86W26 655 aa6.94□□□□□ -1.3
RUNX1-217ENST00000494829 CCDC191Q8NCU4 936 aa6.94□□□□□ -1.3
RUNX1-217ENST00000494829 DIAPH3Q9NSV4 1193 aa6.94□□□□□ -1.3
RUNX1-217ENST00000494829 RBM27Q9P2N5 1060 aaKnown RBP6.94□□□□□ -1.3
RUNX1-217ENST00000494829 MYH3P11055 1940 aa6.94□□□□□ -1.3
RUNX1-217ENST00000494829 TAF5LO75529 589 aa6.94□□□□□ -1.3
RUNX1-217ENST00000494829 STOX1Q6ZVD7 989 aa6.94□□□□□ -1.3
RUNX1-217ENST00000494829 NECAB1Q8N987 351 aa6.94□□□□□ -1.3
RUNX1-217ENST00000494829 FSD1Q9BTV5 496 aa6.94□□□□□ -1.3
RUNX1-217ENST00000494829 GDPD2Q9HCC8 539 aa6.94□□□□□ -1.3
RUNX1-217ENST00000494829 MAP3K15Q6ZN16 1313 aa6.94□□□□□ -1.3
RUNX1-217ENST00000494829 RREB1Q92766 1687 aa6.94□□□□□ -1.3
RUNX1-217ENST00000494829 HAUS7Q99871 368 aa6.94□□□□□ -1.3
RUNX1-217ENST00000494829 TPCN1Q9ULQ1 816 aa6.94□□□□□ -1.3
RUNX1-217ENST00000494829 PALLDQ8WX93 1383 aa6.93□□□□□ -1.3
RUNX1-217ENST00000494829 A0A1B0GUL7 405 aa6.93□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms