RNA–Protein interactions for RNA: ENST00000494810.1

PDCD6IP-215, Transcript of programmed cell death 6 interacting protein, humanhuman

TSL 3

Gene PDCD6IP, Length 619 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD6IP-215ENST00000494810 PCDH11XQ9BZA7 1347 aa8.52□□□□□ -1.05
PDCD6IP-215ENST00000494810 PCDH11YQ9BZA8 1340 aa8.52□□□□□ -1.05
PDCD6IP-215ENST00000494810 GOLGB1Q14789 3259 aaKnown RBP8.51□□□□□ -1.05
PDCD6IP-215ENST00000494810 TERTO14746 1132 aaKnown RBP8.51□□□□□ -1.05
PDCD6IP-215ENST00000494810 TNNT2P45379 298 aaPredicted RBP8.51□□□□□ -1.05
PDCD6IP-215ENST00000494810 CCDC24Q8N4L8 307 aa8.51□□□□□ -1.05
PDCD6IP-215ENST00000494810 HPS1Q92902 700 aa8.51□□□□□ -1.05
PDCD6IP-215ENST00000494810 PPP1R1BQ9UD71 204 aaPredicted RBP8.51□□□□□ -1.05
PDCD6IP-215ENST00000494810 VIRMAQ69YN4 1812 aaKnown RBP8.51□□□□□ -1.05
PDCD6IP-215ENST00000494810 IRF6O14896 467 aa8.5□□□□□ -1.05
PDCD6IP-215ENST00000494810 EIF4A2Q14240 407 aaKnown RBP8.5□□□□□ -1.05
PDCD6IP-215ENST00000494810 UBR3Q6ZT12 1888 aa8.5□□□□□ -1.05
PDCD6IP-215ENST00000494810 MTFR1LQ9H019 292 aa8.5□□□□□ -1.05
PDCD6IP-215ENST00000494810 CHD4Q14839 1912 aa8.49□□□□□ -1.05
PDCD6IP-215ENST00000494810 HOXA2O43364 376 aa8.49□□□□□ -1.05
PDCD6IP-215ENST00000494810 SKOR1P84550 965 aa8.49□□□□□ -1.05
PDCD6IP-215ENST00000494810 KIF7Q2M1P5 1343 aa8.49□□□□□ -1.05
PDCD6IP-215ENST00000494810 PNPLA7Q6ZV29 1317 aa8.49□□□□□ -1.05
PDCD6IP-215ENST00000494810 MDM2Q00987 491 aaPredicted RBP8.48□□□□□ -1.05
PDCD6IP-215ENST00000494810 MPRIPQ6WCQ1 1025 aa8.48□□□□□ -1.05
PDCD6IP-215ENST00000494810 CCNL1Q9UK58 526 aaPredicted RBP8.48□□□□□ -1.05
PDCD6IP-215ENST00000494810 C4BP0C0L5 1744 aa8.48□□□□□ -1.05
PDCD6IP-215ENST00000494810 IGSF1Q8N6C5 1336 aa8.48□□□□□ -1.05
PDCD6IP-215ENST00000494810 JUNDP17535 347 aa8.47□□□□□ -1.05
PDCD6IP-215ENST00000494810 HLA-CQ95604 372 aa8.47□□□□□ -1.05
PDCD6IP-215ENST00000494810 FHDC1Q9C0D6 1143 aaPredicted RBP8.47□□□□□ -1.05
PDCD6IP-215ENST00000494810 SPG7Q9UQ90 795 aa8.47□□□□□ -1.05
PDCD6IP-215ENST00000494810 SCN11AQ9UI33 1791 aa8.47□□□□□ -1.05
PDCD6IP-215ENST00000494810 PALLDQ8WX93 1383 aa8.47□□□□□ -1.05
PDCD6IP-215ENST00000494810 TULP1O00294 542 aaPredicted RBP8.46□□□□□ -1.06
PDCD6IP-215ENST00000494810 PHKG2P15735 406 aa8.46□□□□□ -1.06
PDCD6IP-215ENST00000494810 MORC1Q86VD1 984 aa8.46□□□□□ -1.06
PDCD6IP-215ENST00000494810 SLC16A10Q8TF71 515 aa8.46□□□□□ -1.06
PDCD6IP-215ENST00000494810 PIGBQ92521 554 aa8.46□□□□□ -1.06
PDCD6IP-215ENST00000494810 SYT17Q9BSW7 474 aa8.46□□□□□ -1.06
PDCD6IP-215ENST00000494810 TFCP2L1Q9NZI6 479 aa8.46□□□□□ -1.06
PDCD6IP-215ENST00000494810 KNSTRNQ9Y448 316 aa8.46□□□□□ -1.06
PDCD6IP-215ENST00000494810 ZNF831Q5JPB2 1677 aa8.46□□□□□ -1.06
PDCD6IP-215ENST00000494810 PLEKHG2Q9H7P9 1386 aa8.46□□□□□ -1.06
PDCD6IP-215ENST00000494810 MYH14Q7Z406 1995 aaKnown RBP8.45□□□□□ -1.06
PDCD6IP-215ENST00000494810 PER1O15534 1290 aaPredicted RBP8.45□□□□□ -1.06
PDCD6IP-215ENST00000494810 ALDH1A1P00352 501 aa8.45□□□□□ -1.06
PDCD6IP-215ENST00000494810 COL23A1Q86Y22 540 aaPredicted RBP8.45□□□□□ -1.06
PDCD6IP-215ENST00000494810 IFNL2Q8IZJ0 200 aa8.45□□□□□ -1.06
PDCD6IP-215ENST00000494810 ARXQ96QS3 562 aa8.45□□□□□ -1.06
PDCD6IP-215ENST00000494810 COL5A3P25940 1745 aaPredicted RBP8.45□□□□□ -1.06
PDCD6IP-215ENST00000494810 MAP3K5Q99683 1374 aa8.45□□□□□ -1.06
PDCD6IP-215ENST00000494810 LCE2CQ5TA81 110 aa8.44□□□□□ -1.06
PDCD6IP-215ENST00000494810 RETREG3Q86VR2 466 aa8.44□□□□□ -1.06
PDCD6IP-215ENST00000494810 AEBP1Q8IUX7 1158 aa8.44□□□□□ -1.06
PDCD6IP-215ENST00000494810 SMARCC1Q92922 1105 aaPredicted RBP8.44□□□□□ -1.06
PDCD6IP-215ENST00000494810 SIAH2O43255 324 aa8.43□□□□□ -1.06
PDCD6IP-215ENST00000494810 IL13P35225 146 aa8.43□□□□□ -1.06
PDCD6IP-215ENST00000494810 CLCN1P35523 988 aa8.43□□□□□ -1.06
PDCD6IP-215ENST00000494810 AMIGO3Q86WK7 504 aa8.43□□□□□ -1.06
PDCD6IP-215ENST00000494810 NUDT12Q9BQG2 462 aa8.43□□□□□ -1.06
PDCD6IP-215ENST00000494810 GPCPD1Q9NPB8 672 aa8.43□□□□□ -1.06
PDCD6IP-215ENST00000494810 TMOD3Q9NYL9 352 aa8.43□□□□□ -1.06
PDCD6IP-215ENST00000494810 ASAP1Q9ULH1 1129 aa8.43□□□□□ -1.06
PDCD6IP-215ENST00000494810 KDRP35968 1356 aa8.43□□□□□ -1.06
PDCD6IP-215ENST00000494810 KDM6AO15550 1401 aaPredicted RBP8.43□□□□□ -1.06
PDCD6IP-215ENST00000494810 LOC102724428A0A0B4J2F2 783 aa8.42□□□□□ -1.06
PDCD6IP-215ENST00000494810 SIK1P57059 783 aa8.42□□□□□ -1.06
PDCD6IP-215ENST00000494810 PLEKHO1Q53GL0 409 aaPredicted RBP8.42□□□□□ -1.06
PDCD6IP-215ENST00000494810 NUTM1Q86Y26 1132 aa8.42□□□□□ -1.06
PDCD6IP-215ENST00000494810 EHBP1Q8NDI1 1231 aa8.42□□□□□ -1.06
PDCD6IP-215ENST00000494810 ATG3Q9NT62 314 aa8.42□□□□□ -1.06
PDCD6IP-215ENST00000494810 TJP1Q07157 1748 aa8.41□□□□□ -1.06
PDCD6IP-215ENST00000494810 ADAMTS7Q9UKP4 1686 aa8.41□□□□□ -1.06
PDCD6IP-215ENST00000494810 CICQ96RK0 1608 aaPredicted RBP8.41□□□□□ -1.06
PDCD6IP-215ENST00000494810 ERVV-2B6SEH9 535 aa8.41□□□□□ -1.06
PDCD6IP-215ENST00000494810 YY1P25490 414 aa8.41□□□□□ -1.06
PDCD6IP-215ENST00000494810 POLD1P28340 1107 aa8.41□□□□□ -1.06
PDCD6IP-215ENST00000494810 MTHFSP49914 203 aa8.41□□□□□ -1.06
PDCD6IP-215ENST00000494810 GUCA2AQ02747 115 aa8.41□□□□□ -1.06
PDCD6IP-215ENST00000494810 ITPK1Q13572 414 aa8.41□□□□□ -1.06
PDCD6IP-215ENST00000494810 AMOTQ4VCS5 1084 aa8.41□□□□□ -1.06
PDCD6IP-215ENST00000494810 SULT6B1Q6IMI4 303 aa8.41□□□□□ -1.06
PDCD6IP-215ENST00000494810 ZNF530Q6P9A1 599 aaPredicted RBP8.41□□□□□ -1.06
PDCD6IP-215ENST00000494810 SMIM5Q71RC9 77 aa8.41□□□□□ -1.06
PDCD6IP-215ENST00000494810 NPAS3Q8IXF0 933 aa8.41□□□□□ -1.06
PDCD6IP-215ENST00000494810 LINC00116Q8NCU8 138 aa8.41□□□□□ -1.06
PDCD6IP-215ENST00000494810 SYMPKQ92797 1274 aaKnown RBP8.41□□□□□ -1.06
PDCD6IP-215ENST00000494810 DCAF5Q96JK2 942 aa8.41□□□□□ -1.06
PDCD6IP-215ENST00000494810 FAM217BQ9NTX9 383 aaPredicted RBP8.41□□□□□ -1.06
PDCD6IP-215ENST00000494810 NXF1Q9UBU9 619 aaKnown RBP8.41□□□□□ -1.06
PDCD6IP-215ENST00000494810 C4AP0C0L4 1744 aa8.4□□□□□ -1.06
PDCD6IP-215ENST00000494810 COL3A1P02461 1466 aaPredicted RBP8.4□□□□□ -1.06
PDCD6IP-215ENST00000494810 NPC1L1Q9UHC9 1359 aa8.4□□□□□ -1.06
PDCD6IP-215ENST00000494810 HSP90AB1P08238 724 aaKnown RBP8.4□□□□□ -1.06
PDCD6IP-215ENST00000494810 HMGB2P26583 209 aaKnown RBP8.4□□□□□ -1.06
PDCD6IP-215ENST00000494810 CC2D1BQ5T0F9 858 aaKnown RBP8.4□□□□□ -1.06
PDCD6IP-215ENST00000494810 MSL1Q68DK7 614 aa8.4□□□□□ -1.06
PDCD6IP-215ENST00000494810 PTCRAQ6ISU1 281 aaPredicted RBP8.4□□□□□ -1.06
PDCD6IP-215ENST00000494810 FLAD1Q8NFF5 587 aa8.4□□□□□ -1.06
PDCD6IP-215ENST00000494810 CCDC102AQ96A19 550 aa8.4□□□□□ -1.06
PDCD6IP-215ENST00000494810 SLC4A9Q96Q91 983 aa8.4□□□□□ -1.06
PDCD6IP-215ENST00000494810 WASF2Q9Y6W5 498 aa8.4□□□□□ -1.06
PDCD6IP-215ENST00000494810 KIF13BQ9NQT8 1826 aa8.4□□□□□ -1.07
PDCD6IP-215ENST00000494810 FAM181BA6NEQ2 426 aa8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms