RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 IRF7Q92985 503 aa6.36□□□□□ -1.39
CMSS1-207ENST00000494412 KLRG1Q96E93 195 aa6.36□□□□□ -1.39
CMSS1-207ENST00000494412 DNAJC25Q9H1X3 360 aa6.36□□□□□ -1.39
CMSS1-207ENST00000494412 PRKAG2Q9UGJ0 569 aa6.36□□□□□ -1.39
CMSS1-207ENST00000494412 EPB41L3Q9Y2J2 1087 aaPredicted RBP6.36□□□□□ -1.39
CMSS1-207ENST00000494412 TGFBR3LH3BV60 316 aa6.35□□□□□ -1.39
CMSS1-207ENST00000494412 GPR25O00155 361 aa6.35□□□□□ -1.39
CMSS1-207ENST00000494412 VSIG8P0DPA2 414 aa6.35□□□□□ -1.39
CMSS1-207ENST00000494412 ATP4AP20648 1035 aa6.35□□□□□ -1.39
CMSS1-207ENST00000494412 HIF1AQ16665 826 aa6.35□□□□□ -1.39
CMSS1-207ENST00000494412 NBPF1Q3BBV0 1214 aa6.35□□□□□ -1.39
CMSS1-207ENST00000494412 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.35□□□□□ -1.39
CMSS1-207ENST00000494412 TRIM22Q8IYM9 498 aa6.35□□□□□ -1.39
CMSS1-207ENST00000494412 NANOS1Q8WY41 292 aaKnown RBP6.35□□□□□ -1.39
CMSS1-207ENST00000494412 DNAJC2Q99543 621 aaKnown RBP6.35□□□□□ -1.39
CMSS1-207ENST00000494412 ATP2B1P20020 1258 aa6.34□□□□□ -1.39
CMSS1-207ENST00000494412 DNAJA1P31689 397 aaKnown RBP6.34□□□□□ -1.39
CMSS1-207ENST00000494412 GTF2F1P35269 517 aaKnown RBP eCLIP6.34□□□□□ -1.39
CMSS1-207ENST00000494412 IDH3AP50213 366 aa6.34□□□□□ -1.39
CMSS1-207ENST00000494412 ZNF394Q53GI3 561 aa6.34□□□□□ -1.39
CMSS1-207ENST00000494412 SV2AQ7L0J3 742 aa6.34□□□□□ -1.39
CMSS1-207ENST00000494412 DPH6Q7L8W6 267 aa6.34□□□□□ -1.39
CMSS1-207ENST00000494412 SLC43A3Q8NBI5 491 aa6.34□□□□□ -1.39
CMSS1-207ENST00000494412 DHX38Q92620 1227 aaKnown RBP6.34□□□□□ -1.39
CMSS1-207ENST00000494412 GTPBP3Q969Y2 492 aaKnown RBP6.34□□□□□ -1.39
CMSS1-207ENST00000494412 HSH2DQ96JZ2 352 aa6.34□□□□□ -1.39
CMSS1-207ENST00000494412 SPATA32Q96LK8 384 aa6.34□□□□□ -1.39
CMSS1-207ENST00000494412 NUCKS1Q9H1E3 243 aaKnown RBP6.34□□□□□ -1.39
CMSS1-207ENST00000494412 FOXD3Q9UJU5 478 aaPredicted RBP6.34□□□□□ -1.39
CMSS1-207ENST00000494412 USP20Q9Y2K6 914 aa6.34□□□□□ -1.39
CMSS1-207ENST00000494412 PCDHGB7Q9Y5F8 929 aa6.34□□□□□ -1.39
CMSS1-207ENST00000494412 KRT76Q01546 638 aa6.33□□□□□ -1.4
CMSS1-207ENST00000494412 ARSJQ5FYB0 599 aaPredicted RBP6.33□□□□□ -1.4
CMSS1-207ENST00000494412 RNFT1Q5M7Z0 435 aa6.33□□□□□ -1.4
CMSS1-207ENST00000494412 USPL1Q5W0Q7 1092 aa6.33□□□□□ -1.4
CMSS1-207ENST00000494412 PI16Q6UXB8 463 aa6.33□□□□□ -1.4
CMSS1-207ENST00000494412 USP48Q86UV5 1035 aa6.33□□□□□ -1.4
CMSS1-207ENST00000494412 ZNF280CQ8ND82 737 aa6.33□□□□□ -1.4
CMSS1-207ENST00000494412 SUSD3Q96L08 255 aa6.33□□□□□ -1.4
CMSS1-207ENST00000494412 NLRP2Q9NX02 1062 aa6.33□□□□□ -1.4
CMSS1-207ENST00000494412 INPP5FQ9Y2H2 1132 aa6.33□□□□□ -1.4
CMSS1-207ENST00000494412 H7C1W4 665 aa6.32□□□□□ -1.4
CMSS1-207ENST00000494412 TNFRSF21O75509 655 aa6.32□□□□□ -1.4
CMSS1-207ENST00000494412 TATP17735 454 aaPredicted RBP6.32□□□□□ -1.4
CMSS1-207ENST00000494412 CDK11BP21127 795 aaKnown RBP6.32□□□□□ -1.4
CMSS1-207ENST00000494412 IRS1P35568 1242 aa6.32□□□□□ -1.4
CMSS1-207ENST00000494412 BICDL1Q6ZP65 573 aa6.32□□□□□ -1.4
CMSS1-207ENST00000494412 HS2ST1Q7LGA3 356 aa6.32□□□□□ -1.4
CMSS1-207ENST00000494412 ZNF438Q7Z4V0 828 aa6.32□□□□□ -1.4
CMSS1-207ENST00000494412 ZNF654Q8IZM8 581 aa6.32□□□□□ -1.4
CMSS1-207ENST00000494412 CMTR1Q8N1G2 835 aaKnown RBP6.32□□□□□ -1.4
CMSS1-207ENST00000494412 PGBD3Q8N328 593 aa6.32□□□□□ -1.4
CMSS1-207ENST00000494412 EPS8L3Q8TE67 593 aaKnown RBP6.32□□□□□ -1.4
CMSS1-207ENST00000494412 SNX29Q8TEQ0 813 aa6.32□□□□□ -1.4
CMSS1-207ENST00000494412 CCDC74AQ96AQ1 378 aa6.32□□□□□ -1.4
CMSS1-207ENST00000494412 COL25A1Q9BXS0 654 aaPredicted RBP6.32□□□□□ -1.4
CMSS1-207ENST00000494412 C12orf49Q9H741 205 aa6.32□□□□□ -1.4
CMSS1-207ENST00000494412 ZDHHC3Q9NYG2 299 aa6.32□□□□□ -1.4
CMSS1-207ENST00000494412 DDX41Q9UJV9 622 aaKnown RBP6.32□□□□□ -1.4
CMSS1-207ENST00000494412 CDK11AQ9UQ88 783 aaPredicted RBP6.32□□□□□ -1.4
CMSS1-207ENST00000494412 A0A1W2PNR3 127 aa6.31□□□□□ -1.4
CMSS1-207ENST00000494412 CANXP27824 592 aaKnown RBP6.31□□□□□ -1.4
CMSS1-207ENST00000494412 ARSDP51689 593 aa6.31□□□□□ -1.4
CMSS1-207ENST00000494412 UBAP2LQ14157 1087 aaKnown RBP6.31□□□□□ -1.4
CMSS1-207ENST00000494412 GAS6Q14393 721 aa6.31□□□□□ -1.4
CMSS1-207ENST00000494412 IER5Q5VY09 327 aa6.31□□□□□ -1.4
CMSS1-207ENST00000494412 C7orf43Q8WVR3 580 aa6.31□□□□□ -1.4
CMSS1-207ENST00000494412 CNTNAP3BQ96NU0 1288 aa6.31□□□□□ -1.4
CMSS1-207ENST00000494412 ZIC5Q96T25 663 aa6.31□□□□□ -1.4
CMSS1-207ENST00000494412 CNTNAP3Q9BZ76 1288 aa6.31□□□□□ -1.4
CMSS1-207ENST00000494412 OSBPL7Q9BZF2 842 aa6.31□□□□□ -1.4
CMSS1-207ENST00000494412 CRISPLD1Q9H336 500 aa6.31□□□□□ -1.4
CMSS1-207ENST00000494412 NEUROD4Q9HD90 331 aa6.31□□□□□ -1.4
CMSS1-207ENST00000494412 DMGDHQ9UI17 866 aaKnown RBP6.31□□□□□ -1.4
CMSS1-207ENST00000494412 GGT7Q9UJ14 662 aa6.31□□□□□ -1.4
CMSS1-207ENST00000494412 FNDC3AQ9Y2H6 1198 aaKnown RBP6.31□□□□□ -1.4
CMSS1-207ENST00000494412 UBAP1LF5GYI3 381 aa6.3□□□□□ -1.4
CMSS1-207ENST00000494412 GIPC1O14908 333 aa6.3□□□□□ -1.4
CMSS1-207ENST00000494412 PHACTR2O75167 634 aa6.3□□□□□ -1.4
CMSS1-207ENST00000494412 RACK1P63244 317 aaKnown RBP6.3□□□□□ -1.4
CMSS1-207ENST00000494412 ARID5AQ03989 594 aa6.3□□□□□ -1.4
CMSS1-207ENST00000494412 TRIP4Q15650 581 aaPredicted RBP6.3□□□□□ -1.4
CMSS1-207ENST00000494412 MEI1Q5TIA1 1274 aa6.3□□□□□ -1.4
CMSS1-207ENST00000494412 LNPKQ9C0E8 428 aa6.3□□□□□ -1.4
CMSS1-207ENST00000494412 ANKIB1Q9P2G1 1089 aa6.3□□□□□ -1.4
CMSS1-207ENST00000494412 RTCBQ9Y3I0 505 aaKnown RBP6.3□□□□□ -1.4
CMSS1-207ENST00000494412 POLR3DP05423 398 aaPredicted RBP6.29□□□□□ -1.4
CMSS1-207ENST00000494412 USP17L7P0C7H9 530 aa6.29□□□□□ -1.4
CMSS1-207ENST00000494412 PTPN12Q05209 780 aaKnown RBP6.29□□□□□ -1.4
CMSS1-207ENST00000494412 TAF1CQ15572 869 aaPredicted RBP6.29□□□□□ -1.4
CMSS1-207ENST00000494412 EFHC2Q5JST6 749 aa6.29□□□□□ -1.4
CMSS1-207ENST00000494412 PDE12Q6L8Q7 609 aaKnown RBP6.29□□□□□ -1.4
CMSS1-207ENST00000494412 GIMAP6Q6P9H5 292 aa6.29□□□□□ -1.4
CMSS1-207ENST00000494412 XKR5Q6UX68 686 aa6.29□□□□□ -1.4
CMSS1-207ENST00000494412 LRRC69Q6ZNQ3 347 aa6.29□□□□□ -1.4
CMSS1-207ENST00000494412 PMFBP1Q8TBY8 1022 aa6.29□□□□□ -1.4
CMSS1-207ENST00000494412 GMCL1Q96IK5 515 aa6.29□□□□□ -1.4
CMSS1-207ENST00000494412 ZCCHC2Q9C0B9 1178 aaKnown RBP6.29□□□□□ -1.4
CMSS1-207ENST00000494412 ELP3Q9H9T3 547 aa6.29□□□□□ -1.4
CMSS1-207ENST00000494412 ZFYVE28Q9HCC9 887 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms