RNA–Protein interactions for RNA: ENST00000494245.1

STX1A-212, Transcript of syntaxin 1A, humanhuman

TSL 4

Gene STX1A, Length 565 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
STX1A-212ENST00000494245 TTLL11Q8NHH1 800 aa26.72■■□□□ 1.87
STX1A-212ENST00000494245 RTL9Q8NET4 1388 aa26.71■■□□□ 1.87
STX1A-212ENST00000494245 H0YIN7 160 aa26.71■■□□□ 1.87
STX1A-212ENST00000494245 RPGRQ92834 1020 aaKnown RBP26.71■■□□□ 1.87
STX1A-212ENST00000494245 IRX6P78412 446 aaPredicted RBP26.7■■□□□ 1.86
STX1A-212ENST00000494245 EPHA10Q5JZY3 1008 aa26.7■■□□□ 1.86
STX1A-212ENST00000494245 LMBR1LQ6UX01 489 aa26.7■■□□□ 1.86
STX1A-212ENST00000494245 C3orf67Q6ZVT6 689 aa26.7■■□□□ 1.86
STX1A-212ENST00000494245 C2CD5Q86YS7 1000 aa26.7■■□□□ 1.86
STX1A-212ENST00000494245 KLHL34Q8N239 644 aa26.7■■□□□ 1.86
STX1A-212ENST00000494245 SRGNP10124 158 aa26.69■■□□□ 1.86
STX1A-212ENST00000494245 NPR1P16066 1061 aa26.69■■□□□ 1.86
STX1A-212ENST00000494245 CACNA1SQ13698 1873 aa26.69■■□□□ 1.86
STX1A-212ENST00000494245 ANKRD44Q8N8A2 993 aa26.69■■□□□ 1.86
STX1A-212ENST00000494245 MASTLQ96GX5 879 aa26.69■■□□□ 1.86
STX1A-212ENST00000494245 BRCA1P38398 1863 aaKnown RBP26.68■■□□□ 1.86
STX1A-212ENST00000494245 DDX46Q7L014 1031 aaKnown RBP26.68■■□□□ 1.86
STX1A-212ENST00000494245 EXOC6Q8TAG9 804 aa26.68■■□□□ 1.86
STX1A-212ENST00000494245 RBM17Q96I25 401 aaKnown RBP26.68■■□□□ 1.86
STX1A-212ENST00000494245 CHMP3Q9Y3E7 222 aa26.68■■□□□ 1.86
STX1A-212ENST00000494245 HOXA10P31260 410 aaPredicted RBP26.67■■□□□ 1.86
STX1A-212ENST00000494245 MTX1Q13505 466 aa26.67■■□□□ 1.86
STX1A-212ENST00000494245 STYK1Q6J9G0 422 aa26.67■■□□□ 1.86
STX1A-212ENST00000494245 C1orf115Q9H7X2 142 aa26.67■■□□□ 1.86
STX1A-212ENST00000494245 FHDC1Q9C0D6 1143 aaPredicted RBP26.66■■□□□ 1.86
STX1A-212ENST00000494245 ALDH1B1P30837 517 aa26.65■■□□□ 1.86
STX1A-212ENST00000494245 IFIT5Q13325 482 aaKnown RBP26.65■■□□□ 1.86
STX1A-212ENST00000494245 CCDC57Q2TAC2 916 aa26.65■■□□□ 1.86
STX1A-212ENST00000494245 FAM161AQ3B820 660 aa26.65■■□□□ 1.86
STX1A-212ENST00000494245 RPAP2Q8IXW5 612 aaPredicted RBP26.65■■□□□ 1.86
STX1A-212ENST00000494245 CRAMP1Q96RY5 1269 aa26.65■■□□□ 1.86
STX1A-212ENST00000494245 CDC5LQ99459 802 aaKnown RBP26.65■■□□□ 1.86
STX1A-212ENST00000494245 GREM2Q9H772 168 aa26.65■■□□□ 1.86
STX1A-212ENST00000494245 TAF1P21675 1872 aa26.65■■□□□ 1.86
STX1A-212ENST00000494245 SPEF2Q9C093 1822 aa26.65■■□□□ 1.86
STX1A-212ENST00000494245 ANKRD18BA2A2Z9 1011 aa26.64■■□□□ 1.86
STX1A-212ENST00000494245 ITGA6P23229 1130 aa26.64■■□□□ 1.86
STX1A-212ENST00000494245 CHRNA5P30532 468 aa26.64■■□□□ 1.86
STX1A-212ENST00000494245 CNKSR1Q969H4 720 aa26.64■■□□□ 1.86
STX1A-212ENST00000494245 CCDC85AQ96PX6 553 aaPredicted RBP26.64■■□□□ 1.86
STX1A-212ENST00000494245 DPEP1P16444 411 aa26.63■■□□□ 1.85
STX1A-212ENST00000494245 ATP8B2P98198 1209 aa26.63■■□□□ 1.85
STX1A-212ENST00000494245 CEP85Q6P2H3 762 aa26.63■■□□□ 1.85
STX1A-212ENST00000494245 ZNF622Q969S3 477 aaKnown RBP eCLIP26.63■■□□□ 1.85
STX1A-212ENST00000494245 GRAPQ13588 217 aa26.62■■□□□ 1.85
STX1A-212ENST00000494245 GRAPLQ8TC17 118 aaPredicted RBP26.62■■□□□ 1.85
STX1A-212ENST00000494245 A0A0G2JLW4 131 aa26.61■■□□□ 1.85
STX1A-212ENST00000494245 SRGAP3O43295 1099 aa26.61■■□□□ 1.85
STX1A-212ENST00000494245 HMMRO75330 724 aa26.6■■□□□ 1.85
STX1A-212ENST00000494245 TAF7LQ5H9L4 462 aa26.6■■□□□ 1.85
STX1A-212ENST00000494245 ANKRD18AQ8IVF6 992 aa26.6■■□□□ 1.85
STX1A-212ENST00000494245 SYT17Q9BSW7 474 aa26.6■■□□□ 1.85
STX1A-212ENST00000494245 SEC31BQ9NQW1 1179 aa26.6■■□□□ 1.85
STX1A-212ENST00000494245 PIM2Q9P1W9 311 aa26.6■■□□□ 1.85
STX1A-212ENST00000494245 KCNA3P22001 575 aa26.59■■□□□ 1.85
STX1A-212ENST00000494245 IGHMBP2P38935 993 aaKnown RBP26.59■■□□□ 1.85
STX1A-212ENST00000494245 TMC4Q7Z404 712 aa26.59■■□□□ 1.85
STX1A-212ENST00000494245 SSH3Q8TE77 659 aa26.59■■□□□ 1.85
STX1A-212ENST00000494245 SLX4Q8IY92 1834 aa26.58■■□□□ 1.85
STX1A-212ENST00000494245 ARFGEF1Q9Y6D6 1849 aa26.58■■□□□ 1.85
STX1A-212ENST00000494245 BBOX1O75936 387 aa26.58■■□□□ 1.85
STX1A-212ENST00000494245 TTLL6Q8N841 843 aa26.58■■□□□ 1.85
STX1A-212ENST00000494245 NLGN2Q8NFZ4 835 aa26.58■■□□□ 1.85
STX1A-212ENST00000494245 LRRC37AA6NMS7 1700 aa26.57■■□□□ 1.84
STX1A-212ENST00000494245 PNMA6EA0A0J9YXQ4 647 aa26.57■■□□□ 1.84
STX1A-212ENST00000494245 RPS8P62241 208 aaKnown RBP26.57■■□□□ 1.84
STX1A-212ENST00000494245 POLA2Q14181 598 aa26.57■■□□□ 1.84
STX1A-212ENST00000494245 RFX5P48382 616 aaPredicted RBP26.56■■□□□ 1.84
STX1A-212ENST00000494245 ERICH6BQ5W0A0 696 aa26.56■■□□□ 1.84
STX1A-212ENST00000494245 CELF1Q92879 486 aaKnown RBP26.56■■□□□ 1.84
STX1A-212ENST00000494245 COL4A1P02462 1669 aa26.55■■□□□ 1.84
STX1A-212ENST00000494245 MPHOSPH8Q99549 860 aa26.55■■□□□ 1.84
STX1A-212ENST00000494245 COPRSQ9NQ92 184 aa26.55■■□□□ 1.84
STX1A-212ENST00000494245 FBXO3Q9UK99 471 aa26.55■■□□□ 1.84
STX1A-212ENST00000494245 PCDHB15Q9Y5E8 787 aa26.55■■□□□ 1.84
STX1A-212ENST00000494245 PPEF1O14829 653 aaPredicted RBP26.54■■□□□ 1.84
STX1A-212ENST00000494245 PTPN12Q05209 780 aaKnown RBP26.54■■□□□ 1.84
STX1A-212ENST00000494245 DALRD3Q5D0E6 543 aaKnown RBP26.54■■□□□ 1.84
STX1A-212ENST00000494245 PRPF40BQ6NWY9 871 aaKnown RBP26.54■■□□□ 1.84
STX1A-212ENST00000494245 BSDC1Q9NW68 430 aaPredicted RBP26.54■■□□□ 1.84
STX1A-212ENST00000494245 A0A1B0GUL6 1792 aa26.53■■□□□ 1.84
STX1A-212ENST00000494245 LDHAL6AQ6ZMR3 332 aa26.52■■□□□ 1.84
STX1A-212ENST00000494245 SIRT2Q8IXJ6 389 aa26.52■■□□□ 1.84
STX1A-212ENST00000494245 ZNF594Q96JF6 807 aaPredicted RBP26.52■■□□□ 1.84
STX1A-212ENST00000494245 TMX4Q9H1E5 349 aaPredicted RBP26.52■■□□□ 1.84
STX1A-212ENST00000494245 CNNM1Q9NRU3 951 aa26.51■■□□□ 1.83
STX1A-212ENST00000494245 CIAO1O76071 339 aa26.5■■□□□ 1.83
STX1A-212ENST00000494245 SOGA3Q5TF21 947 aa26.5■■□□□ 1.83
STX1A-212ENST00000494245 CC2D2BQ6DHV5 1058 aa26.5■■□□□ 1.83
STX1A-212ENST00000494245 SP8Q8IXZ3 490 aa26.5■■□□□ 1.83
STX1A-212ENST00000494245 ATP6V0A2Q9Y487 856 aa26.5■■□□□ 1.83
STX1A-212ENST00000494245 EYA2O00167 538 aa26.49■■□□□ 1.83
STX1A-212ENST00000494245 HDAC1Q13547 482 aaPredicted RBP26.49■■□□□ 1.83
STX1A-212ENST00000494245 HSP90AB4PQ58FF6 505 aa26.49■■□□□ 1.83
STX1A-212ENST00000494245 KLHDC4Q8TBB5 520 aa26.49■■□□□ 1.83
STX1A-212ENST00000494245 PA2G4Q9UQ80 394 aaKnown RBP26.49■■□□□ 1.83
STX1A-212ENST00000494245 GRIPAP1Q4V328 841 aa26.48■■□□□ 1.83
STX1A-212ENST00000494245 RWDD1Q9H446 243 aaPredicted RBP26.48■■□□□ 1.83
STX1A-212ENST00000494245 NOP58Q9Y2X3 529 aaKnown RBP26.48■■□□□ 1.83
STX1A-212ENST00000494245 G3BP1Q13283 466 aaKnown RBP eCLIP26.47■■□□□ 1.83
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms