RNA–Protein interactions for RNA: ENST00000494187.1

MINDY4-203, Transcript of MINDY lysine 48 deubiquitinase 4, humanhuman

TSL 2

Gene MINDY4, Length 3,573 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MINDY4-203ENST00000494187 POLR3DP05423 398 aaPredicted RBP11.04□□□□□ -0.64
MINDY4-203ENST00000494187 ISM2Q6H9L7 571 aa11.04□□□□□ -0.64
MINDY4-203ENST00000494187 ZNF830Q96NB3 372 aaPredicted RBP11.04□□□□□ -0.64
MINDY4-203ENST00000494187 RAI14Q9P0K7 980 aa11.04□□□□□ -0.64
MINDY4-203ENST00000494187 LARGE1O95461 756 aa11.03□□□□□ -0.64
MINDY4-203ENST00000494187 IRS4O14654 1257 aaPredicted RBP11.03□□□□□ -0.64
MINDY4-203ENST00000494187 STX6O43752 255 aa11.03□□□□□ -0.64
MINDY4-203ENST00000494187 APOBRQ0VD83 1088 aa11.03□□□□□ -0.64
MINDY4-203ENST00000494187 ILDR1Q86SU0 546 aaPredicted RBP11.03□□□□□ -0.64
MINDY4-203ENST00000494187 USP48Q86UV5 1035 aa11.03□□□□□ -0.64
MINDY4-203ENST00000494187 PIGBQ92521 554 aa11.03□□□□□ -0.64
MINDY4-203ENST00000494187 CWC22Q9HCG8 908 aaKnown RBP11.03□□□□□ -0.64
MINDY4-203ENST00000494187 NSFL1CQ9UNZ2 370 aaKnown RBP11.03□□□□□ -0.64
MINDY4-203ENST00000494187 TAF6LQ9Y6J9 622 aa11.03□□□□□ -0.64
MINDY4-203ENST00000494187 ADAMTSL3P82987 1691 aa11.03□□□□□ -0.64
MINDY4-203ENST00000494187 WDR33Q9C0J8 1336 aaKnown RBP11.03□□□□□ -0.64
MINDY4-203ENST00000494187 AGLP35573 1532 aa11.03□□□□□ -0.64
MINDY4-203ENST00000494187 NBPF26B4DH59 902 aa11.03□□□□□ -0.64
MINDY4-203ENST00000494187 JAK2O60674 1132 aa11.03□□□□□ -0.64
MINDY4-203ENST00000494187 HLFQ16534 295 aa11.03□□□□□ -0.64
MINDY4-203ENST00000494187 NBPF14Q5TI25 921 aa11.03□□□□□ -0.64
MINDY4-203ENST00000494187 VPS53Q5VIR6 699 aa11.03□□□□□ -0.64
MINDY4-203ENST00000494187 NBPF10Q6P3W6 841 aaKnown RBP11.03□□□□□ -0.64
MINDY4-203ENST00000494187 Q6ZUG5 572 aa11.03□□□□□ -0.64
MINDY4-203ENST00000494187 NBPF15Q8N660 670 aa11.03□□□□□ -0.64
MINDY4-203ENST00000494187 ZKSCAN3Q9BRR0 538 aa11.03□□□□□ -0.64
MINDY4-203ENST00000494187 CIZ1Q9ULV3 898 aaPredicted RBP11.03□□□□□ -0.64
MINDY4-203ENST00000494187 ADCY9O60503 1353 aa11.03□□□□□ -0.64
MINDY4-203ENST00000494187 ERCC4Q92889 916 aaPredicted RBP11.02□□□□□ -0.64
MINDY4-203ENST00000494187 SHPRHQ149N8 1683 aa11.02□□□□□ -0.65
MINDY4-203ENST00000494187 LMTK3Q96Q04 1460 aa11.02□□□□□ -0.65
MINDY4-203ENST00000494187 SLC9C2Q5TAH2 1124 aa11.02□□□□□ -0.65
MINDY4-203ENST00000494187 PLBD2Q8NHP8 589 aa11.02□□□□□ -0.65
MINDY4-203ENST00000494187 PAG1Q9NWQ8 432 aa11.02□□□□□ -0.65
MINDY4-203ENST00000494187 PCDH11XQ9BZA7 1347 aa11.02□□□□□ -0.65
MINDY4-203ENST00000494187 PCDH11YQ9BZA8 1340 aa11.02□□□□□ -0.65
MINDY4-203ENST00000494187 DIP2AQ14689 1571 aa11.02□□□□□ -0.65
MINDY4-203ENST00000494187 SYT1P21579 422 aa11.02□□□□□ -0.65
MINDY4-203ENST00000494187 BRD2P25440 801 aaKnown RBP11.02□□□□□ -0.65
MINDY4-203ENST00000494187 MCM2P49736 904 aa11.02□□□□□ -0.65
MINDY4-203ENST00000494187 ATP2B3Q16720 1220 aa11.02□□□□□ -0.65
MINDY4-203ENST00000494187 GOLGB1Q14789 3259 aaKnown RBP11.01□□□□□ -0.65
MINDY4-203ENST00000494187 ANKRD18BA2A2Z9 1011 aa11.01□□□□□ -0.65
MINDY4-203ENST00000494187 ITGA6P23229 1130 aa11.01□□□□□ -0.65
MINDY4-203ENST00000494187 MICU3Q86XE3 530 aa11.01□□□□□ -0.65
MINDY4-203ENST00000494187 PI4K2BQ8TCG2 481 aa11.01□□□□□ -0.65
MINDY4-203ENST00000494187 NEK1Q96PY6 1258 aa11.01□□□□□ -0.65
MINDY4-203ENST00000494187 ME1P48163 572 aa11.01□□□□□ -0.65
MINDY4-203ENST00000494187 TDO2P48775 406 aa11.01□□□□□ -0.65
MINDY4-203ENST00000494187 ZSCAN23Q3MJ62 389 aa11.01□□□□□ -0.65
MINDY4-203ENST00000494187 AIDAQ96BJ3 306 aa11.01□□□□□ -0.65
MINDY4-203ENST00000494187 GPHNQ9NQX3 736 aaPredicted RBP11.01□□□□□ -0.65
MINDY4-203ENST00000494187 ATP6V1DQ9Y5K8 247 aa11.01□□□□□ -0.65
MINDY4-203ENST00000494187 CCDC171Q6TFL3 1326 aa11.01□□□□□ -0.65
MINDY4-203ENST00000494187 MED14O60244 1454 aa11.01□□□□□ -0.65
MINDY4-203ENST00000494187 G3V3G9 751 aa11.01□□□□□ -0.65
MINDY4-203ENST00000494187 KCNQ2O43526 872 aa11.01□□□□□ -0.65
MINDY4-203ENST00000494187 DCAF8Q5TAQ9 597 aa11.01□□□□□ -0.65
MINDY4-203ENST00000494187 SPATA31A3Q5VYP0 1347 aa11.01□□□□□ -0.65
MINDY4-203ENST00000494187 ZAP70P43403 619 aa11□□□□□ -0.65
MINDY4-203ENST00000494187 MYL10Q9BUA6 226 aa11□□□□□ -0.65
MINDY4-203ENST00000494187 RRAGDQ9NQL2 400 aaPredicted RBP11□□□□□ -0.65
MINDY4-203ENST00000494187 USP25Q9UHP3 1055 aa11□□□□□ -0.65
MINDY4-203ENST00000494187 AK9Q5TCS8 1911 aa11□□□□□ -0.65
MINDY4-203ENST00000494187 ATP10DQ9P241 1426 aa11□□□□□ -0.65
MINDY4-203ENST00000494187 PTPN12Q05209 780 aaKnown RBP11□□□□□ -0.65
MINDY4-203ENST00000494187 SPATA32Q96LK8 384 aa11□□□□□ -0.65
MINDY4-203ENST00000494187 SDF4Q9BRK5 362 aa11□□□□□ -0.65
MINDY4-203ENST00000494187 GREM2Q9H772 168 aa11□□□□□ -0.65
MINDY4-203ENST00000494187 A0A087WWV3 80 aa11□□□□□ -0.65
MINDY4-203ENST00000494187 HIP1O00291 1037 aa11□□□□□ -0.65
MINDY4-203ENST00000494187 SLC27A2O14975 620 aa11□□□□□ -0.65
MINDY4-203ENST00000494187 COL9A3Q14050 684 aaPredicted RBP11□□□□□ -0.65
MINDY4-203ENST00000494187 RUFY3Q7L099 469 aa11□□□□□ -0.65
MINDY4-203ENST00000494187 SEC31BQ9NQW1 1179 aa11□□□□□ -0.65
MINDY4-203ENST00000494187 KDRP35968 1356 aa10.99□□□□□ -0.65
MINDY4-203ENST00000494187 ME3Q16798 604 aa10.99□□□□□ -0.65
MINDY4-203ENST00000494187 XAGE2Q96GT9 111 aa10.99□□□□□ -0.65
MINDY4-203ENST00000494187 A0A0G2JLW4 131 aa10.99□□□□□ -0.65
MINDY4-203ENST00000494187 EYA2O00167 538 aa10.98□□□□□ -0.65
MINDY4-203ENST00000494187 MCMDC2Q4G0Z9 681 aa10.98□□□□□ -0.65
MINDY4-203ENST00000494187 PAXIP1Q6ZW49 1069 aaPredicted RBP10.98□□□□□ -0.65
MINDY4-203ENST00000494187 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.98□□□□□ -0.65
MINDY4-203ENST00000494187 IFT172Q9UG01 1749 aa10.98□□□□□ -0.65
MINDY4-203ENST00000494187 C1orf167Q5SNV9 1468 aa10.98□□□□□ -0.65
MINDY4-203ENST00000494187 PXDNQ92626 1479 aa10.98□□□□□ -0.65
MINDY4-203ENST00000494187 BIN1O00499 593 aa10.98□□□□□ -0.65
MINDY4-203ENST00000494187 HOXB7P09629 217 aa10.98□□□□□ -0.65
MINDY4-203ENST00000494187 IGHMBP2P38935 993 aaKnown RBP10.98□□□□□ -0.65
MINDY4-203ENST00000494187 HSP90AA4PQ58FG1 418 aa10.98□□□□□ -0.65
MINDY4-203ENST00000494187 KAZALD1Q96I82 304 aa10.98□□□□□ -0.65
MINDY4-203ENST00000494187 INCENPQ9NQS7 918 aa10.98□□□□□ -0.65
MINDY4-203ENST00000494187 WDR17Q8IZU2 1322 aa10.98□□□□□ -0.65
MINDY4-203ENST00000494187 RAD50Q92878 1312 aa10.98□□□□□ -0.65
MINDY4-203ENST00000494187 hCG_1642624A0A1W2PR95 340 aa10.98□□□□□ -0.65
MINDY4-203ENST00000494187 BECN2A8MW95 431 aa10.98□□□□□ -0.65
MINDY4-203ENST00000494187 DHX16O60231 1041 aaKnown RBP10.98□□□□□ -0.65
MINDY4-203ENST00000494187 PRDM1O75626 825 aa10.98□□□□□ -0.65
MINDY4-203ENST00000494187 HSPA4P34932 840 aa10.98□□□□□ -0.65
MINDY4-203ENST00000494187 PDIA6Q15084 440 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 7.8 ms