RNA–Protein interactions for RNA: ENST00000493271.1

SNRNP200-207, Transcript of small nuclear ribonucleoprotein U5 subunit 200, humanhuman

TSL 3

Gene SNRNP200, Length 585 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP200-207ENST00000493271 PDIA6Q15084 440 aa14.44□□□□□ -0.1
SNRNP200-207ENST00000493271 DDX46Q7L014 1031 aaKnown RBP14.44□□□□□ -0.1
SNRNP200-207ENST00000493271 CDC37L1Q7L3B6 337 aa14.44□□□□□ -0.1
SNRNP200-207ENST00000493271 THUMPD2Q9BTF0 503 aaKnown RBP14.44□□□□□ -0.1
SNRNP200-207ENST00000493271 BCL2L13Q9BXK5 485 aa14.44□□□□□ -0.1
SNRNP200-207ENST00000493271 ANKRD36CQ5JPF3 1778 aa14.44□□□□□ -0.1
SNRNP200-207ENST00000493271 SH3TC1Q8TE82 1336 aa14.43□□□□□ -0.1
SNRNP200-207ENST00000493271 GRAPQ13588 217 aa14.43□□□□□ -0.1
SNRNP200-207ENST00000493271 GRAPLQ8TC17 118 aaPredicted RBP14.43□□□□□ -0.1
SNRNP200-207ENST00000493271 H7C1D1 291 aa14.42□□□□□ -0.1
SNRNP200-207ENST00000493271 EIF2S2P20042 333 aaKnown RBP14.42□□□□□ -0.1
SNRNP200-207ENST00000493271 MLLT1Q03111 559 aaPredicted RBP14.42□□□□□ -0.1
SNRNP200-207ENST00000493271 FMR1Q06787 632 aaKnown RBP eCLIP14.42□□□□□ -0.11e-11■■■■□ 19.3
SNRNP200-207ENST00000493271 NOGQ13253 232 aa14.42□□□□□ -0.1
SNRNP200-207ENST00000493271 TCIRG1Q13488 830 aa14.42□□□□□ -0.1
SNRNP200-207ENST00000493271 FAM161AQ3B820 660 aa14.42□□□□□ -0.1
SNRNP200-207ENST00000493271 NLRP10Q86W26 655 aa14.42□□□□□ -0.1
SNRNP200-207ENST00000493271 SLC34A2O95436 690 aa14.41□□□□□ -0.1
SNRNP200-207ENST00000493271 DPF2Q92785 391 aa14.41□□□□□ -0.1
SNRNP200-207ENST00000493271 GLIS2Q9BZE0 524 aaPredicted RBP14.41□□□□□ -0.1
SNRNP200-207ENST00000493271 TRMT112Q9UI30 125 aaKnown RBP14.41□□□□□ -0.1
SNRNP200-207ENST00000493271 CCDC85CA6NKD9 419 aa14.4□□□□□ -0.1
SNRNP200-207ENST00000493271 AOC2O75106 756 aa14.4□□□□□ -0.1
SNRNP200-207ENST00000493271 RIPK4P57078 832 aa14.4□□□□□ -0.1
SNRNP200-207ENST00000493271 COPS6Q7L5N1 327 aa14.4□□□□□ -0.1
SNRNP200-207ENST00000493271 CNOT7Q9UIV1 285 aaKnown RBP14.4□□□□□ -0.1
SNRNP200-207ENST00000493271 LRRC37AA6NMS7 1700 aa14.39□□□□□ -0.11
SNRNP200-207ENST00000493271 RAD17O75943 681 aa14.39□□□□□ -0.11
SNRNP200-207ENST00000493271 HCLS1P14317 486 aaPredicted RBP14.39□□□□□ -0.11
SNRNP200-207ENST00000493271 RPS12P25398 132 aaKnown RBP14.39□□□□□ -0.11
SNRNP200-207ENST00000493271 POTEDQ86YR6 584 aa14.39□□□□□ -0.11
SNRNP200-207ENST00000493271 XAGE3Q8WTP9 111 aa14.39□□□□□ -0.11
SNRNP200-207ENST00000493271 LAMB2P55268 1798 aa14.39□□□□□ -0.11
SNRNP200-207ENST00000493271 HOXB7P09629 217 aa14.38□□□□□ -0.11
SNRNP200-207ENST00000493271 HIRAP54198 1017 aaPredicted RBP14.38□□□□□ -0.11
SNRNP200-207ENST00000493271 WASHC4Q2M389 1173 aa14.38□□□□□ -0.11
SNRNP200-207ENST00000493271 PROSER3Q2NL68 480 aa14.38□□□□□ -0.11
SNRNP200-207ENST00000493271 SLC51AQ86UW1 340 aa14.38□□□□□ -0.11
SNRNP200-207ENST00000493271 ZNF408Q9H9D4 720 aa14.38□□□□□ -0.11
SNRNP200-207ENST00000493271 YDJCA8MPS7 323 aa14.37□□□□□ -0.11
SNRNP200-207ENST00000493271 TMPOP42166 694 aaKnown RBP14.37□□□□□ -0.11
SNRNP200-207ENST00000493271 AIMP1Q12904 312 aaKnown RBP14.37□□□□□ -0.11
SNRNP200-207ENST00000493271 SF3B3Q15393 1217 aaKnown RBP14.37□□□□□ -0.11
SNRNP200-207ENST00000493271 MICALL2Q8IY33 904 aa14.37□□□□□ -0.11
SNRNP200-207ENST00000493271 TRPM4Q8TD43 1214 aa14.37□□□□□ -0.11
SNRNP200-207ENST00000493271 EYA3Q99504 573 aa14.37□□□□□ -0.11
SNRNP200-207ENST00000493271 SAGE1Q9NXZ1 904 aa14.37□□□□□ -0.11
SNRNP200-207ENST00000493271 DUOX1Q9NRD9 1551 aa14.37□□□□□ -0.11
SNRNP200-207ENST00000493271 ANXA1P04083 346 aa14.36□□□□□ -0.11
SNRNP200-207ENST00000493271 HSP90B1P14625 803 aaKnown RBP14.36□□□□□ -0.11
SNRNP200-207ENST00000493271 HUNKP57058 714 aa14.36□□□□□ -0.11
SNRNP200-207ENST00000493271 PLBD2Q8NHP8 589 aa14.36□□□□□ -0.11
SNRNP200-207ENST00000493271 CCDC102AQ96A19 550 aa14.36□□□□□ -0.11
SNRNP200-207ENST00000493271 MCOLN1Q9GZU1 580 aa14.36□□□□□ -0.11
SNRNP200-207ENST00000493271 CHL1O00533 1208 aa14.35□□□□□ -0.11
SNRNP200-207ENST00000493271 RALBP1Q15311 655 aa14.35□□□□□ -0.11
SNRNP200-207ENST00000493271 C2orf69Q8N8R5 385 aa14.35□□□□□ -0.11
SNRNP200-207ENST00000493271 DCPSQ96C86 337 aaKnown RBP14.35□□□□□ -0.11
SNRNP200-207ENST00000493271 DBF4Q9UBU7 674 aaPredicted RBP14.35□□□□□ -0.11
SNRNP200-207ENST00000493271 TSKSQ9UJT2 592 aa14.35□□□□□ -0.11
SNRNP200-207ENST00000493271 NSFL1CQ9UNZ2 370 aaKnown RBP14.35□□□□□ -0.11
SNRNP200-207ENST00000493271 DGKZQ13574 1117 aa14.34□□□□□ -0.11
SNRNP200-207ENST00000493271 RGMBQ6NW40 437 aa14.34□□□□□ -0.11
SNRNP200-207ENST00000493271 ANKRD13DQ6ZTN6 518 aa14.34□□□□□ -0.11
SNRNP200-207ENST00000493271 KRT26Q7Z3Y9 468 aa14.34□□□□□ -0.11
SNRNP200-207ENST00000493271 USP48Q86UV5 1035 aa14.34□□□□□ -0.11
SNRNP200-207ENST00000493271 REM2Q8IYK8 340 aaPredicted RBP14.34□□□□□ -0.11
SNRNP200-207ENST00000493271 ISCA1Q9BUE6 129 aa14.34□□□□□ -0.11
SNRNP200-207ENST00000493271 GBA2Q9HCG7 927 aaPredicted RBP14.34□□□□□ -0.11
SNRNP200-207ENST00000493271 DDX60Q8IY21 1712 aaKnown RBP14.34□□□□□ -0.11
SNRNP200-207ENST00000493271 C6orf229H3BNL8 230 aa14.33□□□□□ -0.12
SNRNP200-207ENST00000493271 PSMD14O00487 310 aa14.33□□□□□ -0.12
SNRNP200-207ENST00000493271 TRIM28Q13263 835 aaKnown RBP14.33□□□□□ -0.12
SNRNP200-207ENST00000493271 HDGFL1Q5TGJ6 251 aa14.33□□□□□ -0.12
SNRNP200-207ENST00000493271 SAMD7Q7Z3H4 446 aa14.32□□□□□ -0.12
SNRNP200-207ENST00000493271 NECTIN2Q92692 538 aa14.32□□□□□ -0.12
SNRNP200-207ENST00000493271 CELF1Q92879 486 aaKnown RBP14.32□□□□□ -0.12
SNRNP200-207ENST00000493271 DBNDD1Q9H9R9 158 aa14.32□□□□□ -0.12
SNRNP200-207ENST00000493271 HYPKQ9NX55 129 aa14.32□□□□□ -0.12
SNRNP200-207ENST00000493271 CHPF2Q9P2E5 772 aa14.32□□□□□ -0.12
SNRNP200-207ENST00000493271 ZBTB12Q9Y330 459 aaPredicted RBP14.32□□□□□ -0.12
SNRNP200-207ENST00000493271 ZNF609O15014 1411 aa14.32□□□□□ -0.12
SNRNP200-207ENST00000493271 ECE2O60344 883 aa14.31□□□□□ -0.12
SNRNP200-207ENST00000493271 TBC1D10BQ4KMP7 808 aaPredicted RBP14.31□□□□□ -0.12
SNRNP200-207ENST00000493271 SULF1Q8IWU6 871 aa14.31□□□□□ -0.12
SNRNP200-207ENST00000493271 CFAP44Q96MT7 982 aa14.31□□□□□ -0.12
SNRNP200-207ENST00000493271 ZC3H12CQ9C0D7 883 aaKnown RBP14.31□□□□□ -0.12
SNRNP200-207ENST00000493271 PODXL2Q9NZ53 605 aa14.31□□□□□ -0.12
SNRNP200-207ENST00000493271 PCDH10Q9P2E7 1040 aa14.31□□□□□ -0.12
SNRNP200-207ENST00000493271 POLLQ9UGP5 575 aa14.31□□□□□ -0.12
SNRNP200-207ENST00000493271 SHTN1A0MZ66 631 aa14.3□□□□□ -0.12
SNRNP200-207ENST00000493271 FAM155AB1AL88 458 aaPredicted RBP14.3□□□□□ -0.12
SNRNP200-207ENST00000493271 VIL1P09327 827 aaKnown RBP14.3□□□□□ -0.12
SNRNP200-207ENST00000493271 ZNF157P51786 506 aaPredicted RBP14.3□□□□□ -0.12
SNRNP200-207ENST00000493271 RPS8P62241 208 aaKnown RBP14.3□□□□□ -0.12
SNRNP200-207ENST00000493271 GPSM2P81274 684 aa14.3□□□□□ -0.12
SNRNP200-207ENST00000493271 KIF4BQ2VIQ3 1234 aa14.3□□□□□ -0.12
SNRNP200-207ENST00000493271 TBC1D16Q8TBP0 767 aa14.3□□□□□ -0.12
SNRNP200-207ENST00000493271 FAM89AQ96GI7 184 aa14.3□□□□□ -0.12
SNRNP200-207ENST00000493271 G3V3G9 751 aa14.29□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms