RNA–Protein interactions for RNA: ENST00000492793.1

CLK1-213, Transcript of CDC like kinase 1, humanhuman

TSL 4

Gene CLK1, Length 596 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-213ENST00000492793 XPCQ01831 940 aaPredicted RBP6.65□□□□□ -1.34
CLK1-213ENST00000492793 TAGLNQ01995 201 aaKnown RBP6.65□□□□□ -1.34
CLK1-213ENST00000492793 FMR1Q06787 632 aaKnown RBP eCLIP6.65□□□□□ -1.34
CLK1-213ENST00000492793 SNX29Q8TEQ0 813 aa6.65□□□□□ -1.34
CLK1-213ENST00000492793 ALKBH8Q96BT7 664 aaKnown RBP6.65□□□□□ -1.34
CLK1-213ENST00000492793 CSRNP1Q96S65 589 aa6.65□□□□□ -1.34
CLK1-213ENST00000492793 GSX2Q9BZM3 304 aa6.65□□□□□ -1.34
CLK1-213ENST00000492793 WWC3Q9ULE0 1092 aa6.65□□□□□ -1.34
CLK1-213ENST00000492793 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.65□□□□□ -1.34
CLK1-213ENST00000492793 PHF20L1A8MW92 1017 aa6.64□□□□□ -1.35
CLK1-213ENST00000492793 EIF1AYO14602 144 aaKnown RBP6.64□□□□□ -1.35
CLK1-213ENST00000492793 CPNE3O75131 537 aaKnown RBP6.64□□□□□ -1.35
CLK1-213ENST00000492793 BMP4P12644 408 aa6.64□□□□□ -1.35
CLK1-213ENST00000492793 ZNF16P17020 682 aaPredicted RBP6.64□□□□□ -1.35
CLK1-213ENST00000492793 MX2P20592 715 aa6.64□□□□□ -1.35
CLK1-213ENST00000492793 RANGAP1P46060 587 aaPredicted RBP6.64□□□□□ -1.35
CLK1-213ENST00000492793 CTBSQ01459 385 aa6.64□□□□□ -1.35
CLK1-213ENST00000492793 DSC3Q14574 896 aa6.64□□□□□ -1.35
CLK1-213ENST00000492793 SLC30A3Q99726 388 aa6.64□□□□□ -1.35
CLK1-213ENST00000492793 CFHR5Q9BXR6 569 aa6.64□□□□□ -1.35
CLK1-213ENST00000492793 NDFIP2Q9NV92 336 aa6.64□□□□□ -1.35
CLK1-213ENST00000492793 RBM47A0AV96 593 aaKnown RBP6.63□□□□□ -1.35
CLK1-213ENST00000492793 EGFRP00533 1210 aa6.63□□□□□ -1.35
CLK1-213ENST00000492793 IGHA2P01877 340 aa6.63□□□□□ -1.35
CLK1-213ENST00000492793 PSAPP07602 524 aa6.63□□□□□ -1.35
CLK1-213ENST00000492793 CES1P23141 567 aa6.63□□□□□ -1.35
CLK1-213ENST00000492793 FGD1P98174 961 aa6.63□□□□□ -1.35
CLK1-213ENST00000492793 COL19A1Q14993 1142 aa6.63□□□□□ -1.35
CLK1-213ENST00000492793 XKR5Q6UX68 686 aa6.63□□□□□ -1.35
CLK1-213ENST00000492793 C1orf127Q8N9H9 656 aa6.63□□□□□ -1.35
CLK1-213ENST00000492793 SLC16A10Q8TF71 515 aa6.63□□□□□ -1.35
CLK1-213ENST00000492793 SETDB2Q96T68 719 aa6.63□□□□□ -1.35
CLK1-213ENST00000492793 KANSL3Q9P2N6 904 aa6.63□□□□□ -1.35
CLK1-213ENST00000492793 MMP20O60882 483 aa6.62□□□□□ -1.35
CLK1-213ENST00000492793 POLR3DP05423 398 aaPredicted RBP6.62□□□□□ -1.35
CLK1-213ENST00000492793 ENOX2Q16206 610 aaKnown RBP6.62□□□□□ -1.35
CLK1-213ENST00000492793 USPL1Q5W0Q7 1092 aa6.62□□□□□ -1.35
CLK1-213ENST00000492793 ALG1LQ6GMV1 187 aa6.62□□□□□ -1.35
CLK1-213ENST00000492793 FBXO33Q7Z6M2 555 aa6.62□□□□□ -1.35
CLK1-213ENST00000492793 NANOS1Q8WY41 292 aaKnown RBP6.62□□□□□ -1.35
CLK1-213ENST00000492793 MRS2Q9HD23 443 aa6.62□□□□□ -1.35
CLK1-213ENST00000492793 C11orf16Q9NQ32 467 aa6.62□□□□□ -1.35
CLK1-213ENST00000492793 CNTN3Q9P232 1028 aa6.62□□□□□ -1.35
CLK1-213ENST00000492793 E9PSI1 815 aa6.61□□□□□ -1.35
CLK1-213ENST00000492793 EREGO14944 169 aa6.61□□□□□ -1.35
CLK1-213ENST00000492793 CYP2E1P05181 493 aaPredicted RBP6.61□□□□□ -1.35
CLK1-213ENST00000492793 PMEPA1Q969W9 287 aa6.61□□□□□ -1.35
CLK1-213ENST00000492793 MRRFQ96E11 262 aaKnown RBP6.61□□□□□ -1.35
CLK1-213ENST00000492793 DUSP9Q99956 384 aaKnown RBP6.61□□□□□ -1.35
CLK1-213ENST00000492793 UBE2OQ9C0C9 1292 aaKnown RBP6.61□□□□□ -1.35
CLK1-213ENST00000492793 DNAJC25Q9H1X3 360 aa6.61□□□□□ -1.35
CLK1-213ENST00000492793 ZFYVE28Q9HCC9 887 aa6.61□□□□□ -1.35
CLK1-213ENST00000492793 NLRP2Q9NX02 1062 aa6.61□□□□□ -1.35
CLK1-213ENST00000492793 ZFATQ9P243 1243 aa6.61□□□□□ -1.35
CLK1-213ENST00000492793 NSFL1CQ9UNZ2 370 aaKnown RBP6.61□□□□□ -1.35
CLK1-213ENST00000492793 GADD45BO75293 160 aaPredicted RBP6.6□□□□□ -1.35
CLK1-213ENST00000492793 PRPF40AO75400 957 aaKnown RBP6.6□□□□□ -1.35
CLK1-213ENST00000492793 PCBP4P57723 403 aaKnown RBP6.6□□□□□ -1.35
CLK1-213ENST00000492793 MLLT1Q03111 559 aaPredicted RBP6.6□□□□□ -1.35
CLK1-213ENST00000492793 FAM182BQ5T319 152 aa6.6□□□□□ -1.35
CLK1-213ENST00000492793 SYT9Q86SS6 491 aa6.6□□□□□ -1.35
CLK1-213ENST00000492793 NCAPG2Q86XI2 1143 aa6.6□□□□□ -1.35
CLK1-213ENST00000492793 NSUN5Q96P11 429 aaKnown RBP6.6□□□□□ -1.35
CLK1-213ENST00000492793 PARP2Q9UGN5 583 aa6.6□□□□□ -1.35
CLK1-213ENST00000492793 HCN2Q9UL51 889 aa6.6□□□□□ -1.35
CLK1-213ENST00000492793 H3BM21 787 aa6.59□□□□□ -1.35
CLK1-213ENST00000492793 TERTO14746 1132 aaKnown RBP6.59□□□□□ -1.35
CLK1-213ENST00000492793 PLAURQ03405 335 aa6.59□□□□□ -1.35
CLK1-213ENST00000492793 PSMD2Q13200 908 aa6.59□□□□□ -1.35
CLK1-213ENST00000492793 HFE2Q6ZVN8 426 aa6.59□□□□□ -1.35
CLK1-213ENST00000492793 DHX32Q7L7V1 743 aaKnown RBP6.59□□□□□ -1.35
CLK1-213ENST00000492793 NPAS3Q8IXF0 933 aa6.59□□□□□ -1.35
CLK1-213ENST00000492793 GPR161Q8N6U8 529 aaKnown RBP6.59□□□□□ -1.35
CLK1-213ENST00000492793 CCDC74AQ96AQ1 378 aa6.59□□□□□ -1.35
CLK1-213ENST00000492793 SPACA7Q96KW9 195 aa6.59□□□□□ -1.35
CLK1-213ENST00000492793 FAM161BQ96MY7 647 aa6.59□□□□□ -1.35
CLK1-213ENST00000492793 EFCC1Q9HA90 598 aa6.59□□□□□ -1.35
CLK1-213ENST00000492793 NPHS2Q9NP85 383 aa6.59□□□□□ -1.35
CLK1-213ENST00000492793 TLR7Q9NYK1 1049 aaKnown RBP6.59□□□□□ -1.35
CLK1-213ENST00000492793 UNCXA6NJT0 531 aa6.58□□□□□ -1.36
CLK1-213ENST00000492793 C2CD2LO14523 706 aa6.58□□□□□ -1.36
CLK1-213ENST00000492793 IRS1P35568 1242 aa6.58□□□□□ -1.36
CLK1-213ENST00000492793 HYAL2Q12891 473 aa6.58□□□□□ -1.36
CLK1-213ENST00000492793 LARP7Q4G0J3 582 aaKnown RBP eCLIP6.58□□□□□ -1.36
CLK1-213ENST00000492793 OR13H1Q8NG92 308 aa6.58□□□□□ -1.36
CLK1-213ENST00000492793 EPS8L3Q8TE67 593 aaKnown RBP6.58□□□□□ -1.36
CLK1-213ENST00000492793 COL25A1Q9BXS0 654 aaPredicted RBP6.58□□□□□ -1.36
CLK1-213ENST00000492793 CHRDQ9H2X0 955 aa6.58□□□□□ -1.36
CLK1-213ENST00000492793 MBIPQ9NS73 344 aa6.58□□□□□ -1.36
CLK1-213ENST00000492793 VTI1BQ9UEU0 232 aa6.58□□□□□ -1.36
CLK1-213ENST00000492793 SPG7Q9UQ90 795 aa6.58□□□□□ -1.36
CLK1-213ENST00000492793 EDN3P14138 238 aa6.57□□□□□ -1.36
CLK1-213ENST00000492793 ITGAEP38570 1179 aa6.57□□□□□ -1.36
CLK1-213ENST00000492793 ZNF468Q5VIY5 522 aaPredicted RBP6.57□□□□□ -1.36
CLK1-213ENST00000492793 PI16Q6UXB8 463 aa6.57□□□□□ -1.36
CLK1-213ENST00000492793 FBF1Q8TES7 1133 aa6.57□□□□□ -1.36
CLK1-213ENST00000492793 IRF7Q92985 503 aa6.57□□□□□ -1.36
CLK1-213ENST00000492793 RNF19AQ9NV58 838 aa6.57□□□□□ -1.36
CLK1-213ENST00000492793 NEURL1BA8MQ27 555 aa6.56□□□□□ -1.36
CLK1-213ENST00000492793 J3QW42 95 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms