RNA–Protein interactions for RNA: ENST00000492772.1

SND1-215, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 4

Gene SND1, Length 549 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-215ENST00000492772 SP8Q8IXZ3 490 aa14.48□□□□□ -0.09
SND1-215ENST00000492772 ZC3H15Q8WU90 426 aaKnown RBP14.48□□□□□ -0.09
SND1-215ENST00000492772 BCL2L13Q9BXK5 485 aa14.48□□□□□ -0.09
SND1-215ENST00000492772 PGAP2Q9UHJ9 254 aa14.48□□□□□ -0.09
SND1-215ENST00000492772 DDX60Q8IY21 1712 aaKnown RBP14.48□□□□□ -0.09
SND1-215ENST00000492772 CCDC85CA6NKD9 419 aa14.47□□□□□ -0.09
SND1-215ENST00000492772 AOC2O75106 756 aa14.47□□□□□ -0.09
SND1-215ENST00000492772 BRPF1P55201 1214 aaPredicted RBP14.47□□□□□ -0.09
SND1-215ENST00000492772 TMC4Q7Z404 712 aa14.47□□□□□ -0.09
SND1-215ENST00000492772 MPNDQ8N594 471 aa14.47□□□□□ -0.09
SND1-215ENST00000492772 GLIS2Q9BZE0 524 aaPredicted RBP14.47□□□□□ -0.09
SND1-215ENST00000492772 BABAM1Q9NWV8 329 aa14.47□□□□□ -0.09
SND1-215ENST00000492772 SLC34A2O95436 690 aa14.46□□□□□ -0.09
SND1-215ENST00000492772 EIF2S2P20042 333 aaKnown RBP14.46□□□□□ -0.09
SND1-215ENST00000492772 MLLT1Q03111 559 aaPredicted RBP14.46□□□□□ -0.09
SND1-215ENST00000492772 GRAPQ13588 217 aa14.46□□□□□ -0.09
SND1-215ENST00000492772 DDX46Q7L014 1031 aaKnown RBP14.46□□□□□ -0.09
SND1-215ENST00000492772 NLRP10Q86W26 655 aa14.46□□□□□ -0.09
SND1-215ENST00000492772 GRAPLQ8TC17 118 aaPredicted RBP14.46□□□□□ -0.09
SND1-215ENST00000492772 SH3TC1Q8TE82 1336 aa14.45□□□□□ -0.1
SND1-215ENST00000492772 PROSER3Q2NL68 480 aa14.45□□□□□ -0.1
SND1-215ENST00000492772 CDC37L1Q7L3B6 337 aa14.45□□□□□ -0.1
SND1-215ENST00000492772 TSKSQ9UJT2 592 aa14.45□□□□□ -0.1
SND1-215ENST00000492772 RAD17O75943 681 aa14.44□□□□□ -0.1
SND1-215ENST00000492772 HCLS1P14317 486 aaPredicted RBP14.44□□□□□ -0.1
SND1-215ENST00000492772 RGS19P49795 217 aa14.44□□□□□ -0.1
SND1-215ENST00000492772 LMOD3Q0VAK6 560 aa14.44□□□□□ -0.1
SND1-215ENST00000492772 TRPM4Q8TD43 1214 aa14.44□□□□□ -0.1
SND1-215ENST00000492772 ZNF408Q9H9D4 720 aa14.44□□□□□ -0.1
SND1-215ENST00000492772 TRMT112Q9UI30 125 aaKnown RBP14.44□□□□□ -0.1
SND1-215ENST00000492772 TAF1P21675 1872 aa14.44□□□□□ -0.1
SND1-215ENST00000492772 H7C1D1 291 aa14.43□□□□□ -0.1
SND1-215ENST00000492772 ANXA1P04083 346 aa14.43□□□□□ -0.1
SND1-215ENST00000492772 NOGQ13253 232 aa14.43□□□□□ -0.1
SND1-215ENST00000492772 COPS6Q7L5N1 327 aa14.43□□□□□ -0.1
SND1-215ENST00000492772 XAGE3Q8WTP9 111 aa14.43□□□□□ -0.1
SND1-215ENST00000492772 CNOT7Q9UIV1 285 aaKnown RBP14.43□□□□□ -0.1
SND1-215ENST00000492772 CASP8AP2Q9UKL3 1982 aa14.42□□□□□ -0.1
SND1-215ENST00000492772 YDJCA8MPS7 323 aa14.42□□□□□ -0.1
SND1-215ENST00000492772 HIRAP54198 1017 aaPredicted RBP14.42□□□□□ -0.1
SND1-215ENST00000492772 RIPK4P57078 832 aa14.42□□□□□ -0.1
SND1-215ENST00000492772 TCIRG1Q13488 830 aa14.42□□□□□ -0.1
SND1-215ENST00000492772 MICALL2Q8IY33 904 aa14.42□□□□□ -0.1
SND1-215ENST00000492772 MCOLN1Q9GZU1 580 aa14.42□□□□□ -0.1
SND1-215ENST00000492772 HUNKP57058 714 aa14.41□□□□□ -0.1
SND1-215ENST00000492772 AIMP1Q12904 312 aaKnown RBP14.41□□□□□ -0.1
SND1-215ENST00000492772 DPF2Q92785 391 aa14.41□□□□□ -0.1
SND1-215ENST00000492772 RPS12P25398 132 aaKnown RBP14.4□□□□□ -0.1
SND1-215ENST00000492772 SHTN1A0MZ66 631 aa14.39□□□□□ -0.11
SND1-215ENST00000492772 PSMD14O00487 310 aa14.39□□□□□ -0.11
SND1-215ENST00000492772 DGKZQ13574 1117 aa14.39□□□□□ -0.11
SND1-215ENST00000492772 WASHC4Q2M389 1173 aa14.39□□□□□ -0.11
SND1-215ENST00000492772 USP48Q86UV5 1035 aa14.39□□□□□ -0.11
SND1-215ENST00000492772 NECTIN2Q92692 538 aa14.39□□□□□ -0.11
SND1-215ENST00000492772 CFAP44Q96MT7 982 aa14.39□□□□□ -0.11
SND1-215ENST00000492772 TMPOP42166 694 aaKnown RBP14.38□□□□□ -0.11
SND1-215ENST00000492772 KRT26Q7Z3Y9 468 aa14.38□□□□□ -0.11
SND1-215ENST00000492772 PLBD2Q8NHP8 589 aa14.38□□□□□ -0.11
SND1-215ENST00000492772 EYA3Q99504 573 aa14.38□□□□□ -0.11
SND1-215ENST00000492772 SAGE1Q9NXZ1 904 aa14.38□□□□□ -0.11
SND1-215ENST00000492772 NSFL1CQ9UNZ2 370 aaKnown RBP14.38□□□□□ -0.11
SND1-215ENST00000492772 ZBTB12Q9Y330 459 aaPredicted RBP14.38□□□□□ -0.11
SND1-215ENST00000492772 HOXB7P09629 217 aa14.37□□□□□ -0.11
SND1-215ENST00000492772 SF3B3Q15393 1217 aaKnown RBP14.37□□□□□ -0.11
SND1-215ENST00000492772 TBC1D10BQ4KMP7 808 aaPredicted RBP14.37□□□□□ -0.11
SND1-215ENST00000492772 RGMBQ6NW40 437 aa14.37□□□□□ -0.11
SND1-215ENST00000492772 SAMD7Q7Z3H4 446 aa14.37□□□□□ -0.11
SND1-215ENST00000492772 DCPSQ96C86 337 aaKnown RBP14.37□□□□□ -0.11
SND1-215ENST00000492772 DBNDD1Q9H9R9 158 aa14.37□□□□□ -0.11
SND1-215ENST00000492772 GBA2Q9HCG7 927 aaPredicted RBP14.37□□□□□ -0.11
SND1-215ENST00000492772 CHPF2Q9P2E5 772 aa14.37□□□□□ -0.11
SND1-215ENST00000492772 COL4A1P02462 1669 aa14.36□□□□□ -0.11
SND1-215ENST00000492772 C6orf229H3BNL8 230 aa14.36□□□□□ -0.11
SND1-215ENST00000492772 ECE2O60344 883 aa14.36□□□□□ -0.11
SND1-215ENST00000492772 HDGFL1Q5TGJ6 251 aa14.36□□□□□ -0.11
SND1-215ENST00000492772 C2orf69Q8N8R5 385 aa14.36□□□□□ -0.11
SND1-215ENST00000492772 CELF1Q92879 486 aaKnown RBP14.36□□□□□ -0.11
SND1-215ENST00000492772 CCDC102AQ96A19 550 aa14.36□□□□□ -0.11
SND1-215ENST00000492772 ISCA1Q9BUE6 129 aa14.36□□□□□ -0.11
SND1-215ENST00000492772 AKAP11Q9UKA4 1901 aa14.36□□□□□ -0.11
SND1-215ENST00000492772 TNRC18O15417 2968 aaPredicted RBP14.36□□□□□ -0.11
SND1-215ENST00000492772 PSME4Q14997 1843 aa14.36□□□□□ -0.11
SND1-215ENST00000492772 RTL9Q8NET4 1388 aa14.35□□□□□ -0.11
SND1-215ENST00000492772 ZNF609O15014 1411 aa14.35□□□□□ -0.11
SND1-215ENST00000492772 POLR2AP24928 1970 aaKnown RBP14.35□□□□□ -0.11
SND1-215ENST00000492772 FAM155AB1AL88 458 aaPredicted RBP14.35□□□□□ -0.11
SND1-215ENST00000492772 CHL1O00533 1208 aa14.35□□□□□ -0.11
SND1-215ENST00000492772 RIMBP2O15034 1052 aa14.35□□□□□ -0.11
SND1-215ENST00000492772 ANKRD13DQ6ZTN6 518 aa14.35□□□□□ -0.11
SND1-215ENST00000492772 FAM89AQ96GI7 184 aa14.35□□□□□ -0.11
SND1-215ENST00000492772 ZIC5Q96T25 663 aa14.35□□□□□ -0.11
SND1-215ENST00000492772 DBF4Q9UBU7 674 aaPredicted RBP14.35□□□□□ -0.11
SND1-215ENST00000492772 POLLQ9UGP5 575 aa14.35□□□□□ -0.11
SND1-215ENST00000492772 SCN9AQ15858 1988 aa14.34□□□□□ -0.11
SND1-215ENST00000492772 ADM5C9JUS6 153 aa14.34□□□□□ -0.11
SND1-215ENST00000492772 EGFRP00533 1210 aa14.34□□□□□ -0.11
SND1-215ENST00000492772 GPSM2P81274 684 aa14.34□□□□□ -0.11
SND1-215ENST00000492772 RALBP1Q15311 655 aa14.34□□□□□ -0.11
SND1-215ENST00000492772 KRT24Q2M2I5 525 aa14.34□□□□□ -0.11
SND1-215ENST00000492772 KIF4BQ2VIQ3 1234 aa14.34□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms