RNA–Protein interactions for RNA: ENST00000491134.5

PRDM2-209, Transcript of PR/SET domain 2, humanhuman

TSL 3

Gene PRDM2, Length 1,100 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM2-209ENST00000491134 GNAI2P04899 355 aa22.89■■□□□ 1.25
PRDM2-209ENST00000491134 PDE6BP35913 854 aa22.89■■□□□ 1.25
PRDM2-209ENST00000491134 NLRP3Q96P20 1036 aa22.89■■□□□ 1.25
PRDM2-209ENST00000491134 SRGNP10124 158 aa22.88■■□□□ 1.25
PRDM2-209ENST00000491134 KCNA3P22001 575 aa22.88■■□□□ 1.25
PRDM2-209ENST00000491134 MTX1Q13505 466 aa22.88■■□□□ 1.25
PRDM2-209ENST00000491134 CHMP4BQ9H444 224 aaKnown RBP22.88■■□□□ 1.25
PRDM2-209ENST00000491134 HDAC5Q9UQL6 1122 aa22.88■■□□□ 1.25
PRDM2-209ENST00000491134 HOXA10P31260 410 aaPredicted RBP22.87■■□□□ 1.25
PRDM2-209ENST00000491134 LMBR1LQ6UX01 489 aa22.87■■□□□ 1.25
PRDM2-209ENST00000491134 C1orf115Q9H7X2 142 aa22.87■■□□□ 1.25
PRDM2-209ENST00000491134 TGFB2P61812 414 aa22.86■■□□□ 1.25
PRDM2-209ENST00000491134 PDZRN3Q9UPQ7 1066 aa22.86■■□□□ 1.25
PRDM2-209ENST00000491134 CHRNA5P30532 468 aa22.85■■□□□ 1.25
PRDM2-209ENST00000491134 GREM2Q9H772 168 aa22.85■■□□□ 1.25
PRDM2-209ENST00000491134 GOLGB1Q14789 3259 aaKnown RBP22.84■■□□□ 1.25
PRDM2-209ENST00000491134 AAMPQ13685 434 aa22.84■■□□□ 1.25
PRDM2-209ENST00000491134 C2CD5Q86YS7 1000 aa22.84■■□□□ 1.25
PRDM2-209ENST00000491134 FHDC1Q9C0D6 1143 aaPredicted RBP22.84■■□□□ 1.25
PRDM2-209ENST00000491134 DPEP1P16444 411 aa22.83■■□□□ 1.25
PRDM2-209ENST00000491134 RFX5P48382 616 aaPredicted RBP22.83■■□□□ 1.25
PRDM2-209ENST00000491134 FAM161AQ3B820 660 aa22.83■■□□□ 1.25
PRDM2-209ENST00000491134 CCDC152Q4G0S7 254 aa22.83■■□□□ 1.25
PRDM2-209ENST00000491134 CEP85Q6P2H3 762 aa22.83■■□□□ 1.25
PRDM2-209ENST00000491134 SIRT2Q8IXJ6 389 aa22.83■■□□□ 1.25
PRDM2-209ENST00000491134 SLX4Q8IY92 1834 aa22.82■■□□□ 1.24
PRDM2-209ENST00000491134 CACNA1SQ13698 1873 aa22.82■■□□□ 1.24
PRDM2-209ENST00000491134 A0A0G2JLW4 131 aa22.82■■□□□ 1.24
PRDM2-209ENST00000491134 H0YIN7 160 aa22.82■■□□□ 1.24
PRDM2-209ENST00000491134 NPR1P16066 1061 aa22.82■■□□□ 1.24
PRDM2-209ENST00000491134 ATP8B2P98198 1209 aa22.82■■□□□ 1.24
PRDM2-209ENST00000491134 STYK1Q6J9G0 422 aa22.82■■□□□ 1.24
PRDM2-209ENST00000491134 NLGN2Q8NFZ4 835 aa22.82■■□□□ 1.24
PRDM2-209ENST00000491134 MASTLQ96GX5 879 aa22.82■■□□□ 1.24
PRDM2-209ENST00000491134 CRAMP1Q96RY5 1269 aa22.82■■□□□ 1.24
PRDM2-209ENST00000491134 SEC31BQ9NQW1 1179 aa22.82■■□□□ 1.24
PRDM2-209ENST00000491134 PCDHB15Q9Y5E8 787 aa22.82■■□□□ 1.24
PRDM2-209ENST00000491134 PNMA6EA0A0J9YXQ4 647 aa22.81■■□□□ 1.24
PRDM2-209ENST00000491134 CCDC85AQ96PX6 553 aaPredicted RBP22.81■■□□□ 1.24
PRDM2-209ENST00000491134 SPEF2Q9C093 1822 aa22.8■■□□□ 1.24
PRDM2-209ENST00000491134 ITGA6P23229 1130 aa22.8■■□□□ 1.24
PRDM2-209ENST00000491134 POLA2Q14181 598 aa22.8■■□□□ 1.24
PRDM2-209ENST00000491134 SSH3Q8TE77 659 aa22.8■■□□□ 1.24
PRDM2-209ENST00000491134 SYT17Q9BSW7 474 aa22.8■■□□□ 1.24
PRDM2-209ENST00000491134 RPAP2Q8IXW5 612 aaPredicted RBP22.79■■□□□ 1.24
PRDM2-209ENST00000491134 RPGRQ92834 1020 aaKnown RBP22.79■■□□□ 1.24
PRDM2-209ENST00000491134 PPP1R1BQ9UD71 204 aaPredicted RBP22.79■■□□□ 1.24
PRDM2-209ENST00000491134 LRRC37AA6NMS7 1700 aa22.78■■□□□ 1.24
PRDM2-209ENST00000491134 DDX46Q7L014 1031 aaKnown RBP22.78■■□□□ 1.24
PRDM2-209ENST00000491134 CELF1Q92879 486 aaKnown RBP22.78■■□□□ 1.24
PRDM2-209ENST00000491134 RBM17Q96I25 401 aaKnown RBP22.78■■□□□ 1.24
PRDM2-209ENST00000491134 PTPN12Q05209 780 aaKnown RBP22.77■■□□□ 1.24
PRDM2-209ENST00000491134 IFIT5Q13325 482 aaKnown RBP22.77■■□□□ 1.24
PRDM2-209ENST00000491134 GRAPQ13588 217 aa22.77■■□□□ 1.24
PRDM2-209ENST00000491134 GRAPLQ8TC17 118 aaPredicted RBP22.77■■□□□ 1.24
PRDM2-209ENST00000491134 SRGAP3O43295 1099 aa22.76■■□□□ 1.23
PRDM2-209ENST00000491134 KLHL34Q8N239 644 aa22.76■■□□□ 1.23
PRDM2-209ENST00000491134 CHMP3Q9Y3E7 222 aa22.76■■□□□ 1.23
PRDM2-209ENST00000491134 A0A1B0GUL6 1792 aa22.76■■□□□ 1.23
PRDM2-209ENST00000491134 ARFGEF1Q9Y6D6 1849 aa22.75■■□□□ 1.23
PRDM2-209ENST00000491134 ANKRD18BA2A2Z9 1011 aa22.75■■□□□ 1.23
PRDM2-209ENST00000491134 ALDH1B1P30837 517 aa22.75■■□□□ 1.23
PRDM2-209ENST00000491134 RPS8P62241 208 aaKnown RBP22.75■■□□□ 1.23
PRDM2-209ENST00000491134 CCDC57Q2TAC2 916 aa22.75■■□□□ 1.23
PRDM2-209ENST00000491134 C7orf43Q8WVR3 580 aa22.75■■□□□ 1.23
PRDM2-209ENST00000491134 CNKSR1Q969H4 720 aa22.75■■□□□ 1.23
PRDM2-209ENST00000491134 ZNF622Q969S3 477 aaKnown RBP eCLIP22.75■■□□□ 1.239e-7■■■□□ 17.7
PRDM2-209ENST00000491134 ZNF594Q96JF6 807 aaPredicted RBP22.75■■□□□ 1.23
PRDM2-209ENST00000491134 COPRSQ9NQ92 184 aa22.75■■□□□ 1.23
PRDM2-209ENST00000491134 SLC51AQ86UW1 340 aa22.74■■□□□ 1.23
PRDM2-209ENST00000491134 KLHDC4Q8TBB5 520 aa22.74■■□□□ 1.23
PRDM2-209ENST00000491134 CDC5LQ99459 802 aaKnown RBP22.74■■□□□ 1.23
PRDM2-209ENST00000491134 PIM2Q9P1W9 311 aa22.74■■□□□ 1.23
PRDM2-209ENST00000491134 BBOX1O75936 387 aa22.73■■□□□ 1.23
PRDM2-209ENST00000491134 PRPF40BQ6NWY9 871 aaKnown RBP22.73■■□□□ 1.23
PRDM2-209ENST00000491134 TTLL6Q8N841 843 aa22.73■■□□□ 1.23
PRDM2-209ENST00000491134 SNED1Q8TER0 1413 aa22.73■■□□□ 1.23
PRDM2-209ENST00000491134 LTBP1Q14766 1721 aa22.72■■□□□ 1.23
PRDM2-209ENST00000491134 NEFLP07196 543 aa22.72■■□□□ 1.23
PRDM2-209ENST00000491134 ANKRD18AQ8IVF6 992 aa22.72■■□□□ 1.23
PRDM2-209ENST00000491134 BSDC1Q9NW68 430 aaPredicted RBP22.72■■□□□ 1.23
PRDM2-209ENST00000491134 PA2G4Q9UQ80 394 aaKnown RBP22.72■■□□□ 1.23
PRDM2-209ENST00000491134 NOP58Q9Y2X3 529 aaKnown RBP22.72■■□□□ 1.23
PRDM2-209ENST00000491134 PUS3Q9BZE2 481 aaKnown RBP22.71■■□□□ 1.23
PRDM2-209ENST00000491134 RIPOR2Q9Y4F9 1068 aa22.71■■□□□ 1.23
PRDM2-209ENST00000491134 HDAC1Q13547 482 aaPredicted RBP22.7■■□□□ 1.22
PRDM2-209ENST00000491134 ATG9AQ7Z3C6 839 aa22.7■■□□□ 1.22
PRDM2-209ENST00000491134 FBXO3Q9UK99 471 aa22.7■■□□□ 1.22
PRDM2-209ENST00000491134 PPEF1O14829 653 aaPredicted RBP22.69■■□□□ 1.22
PRDM2-209ENST00000491134 LRRC24Q50LG9 513 aa22.69■■□□□ 1.22
PRDM2-209ENST00000491134 ERICH6BQ5W0A0 696 aa22.69■■□□□ 1.22
PRDM2-209ENST00000491134 TMC4Q7Z404 712 aa22.69■■□□□ 1.22
PRDM2-209ENST00000491134 ATP6V0A2Q9Y487 856 aa22.69■■□□□ 1.22
PRDM2-209ENST00000491134 EYA2O00167 538 aa22.68■■□□□ 1.22
PRDM2-209ENST00000491134 HMMRO75330 724 aa22.68■■□□□ 1.22
PRDM2-209ENST00000491134 CIAO1O76071 339 aa22.68■■□□□ 1.22
PRDM2-209ENST00000491134 IGHMBP2P38935 993 aaKnown RBP22.68■■□□□ 1.22
PRDM2-209ENST00000491134 DALRD3Q5D0E6 543 aaKnown RBP22.68■■□□□ 1.22
PRDM2-209ENST00000491134 LDHAL6AQ6ZMR3 332 aa22.68■■□□□ 1.22
PRDM2-209ENST00000491134 SP8Q8IXZ3 490 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms