RNA–Protein interactions for RNA: ENST00000490733.1

EPCAM-206, Transcript of epithelial cell adhesion molecule, humanhuman

TSL 3

Gene EPCAM, Length 752 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPCAM-206ENST00000490733 FAM174AQ8TBP5 190 aa6.5□□□□□ -1.37
EPCAM-206ENST00000490733 PCMTD1Q96MG8 357 aaPredicted RBP6.5□□□□□ -1.37
EPCAM-206ENST00000490733 YTHDC1Q96MU7 727 aaKnown RBP6.5□□□□□ -1.37
EPCAM-206ENST00000490733 ADAMTS8Q9UP79 889 aa6.5□□□□□ -1.37
EPCAM-206ENST00000490733 PPM1GO15355 546 aaPredicted RBP6.49□□□□□ -1.37
EPCAM-206ENST00000490733 USP17L8P0C7I0 530 aa6.49□□□□□ -1.37
EPCAM-206ENST00000490733 IL13P35225 146 aa6.49□□□□□ -1.37
EPCAM-206ENST00000490733 HSP90AB2PQ58FF8 381 aa6.49□□□□□ -1.37
EPCAM-206ENST00000490733 NBPF14Q5TI25 921 aa6.49□□□□□ -1.37
EPCAM-206ENST00000490733 ARHGEF25Q86VW2 580 aa6.49□□□□□ -1.37
EPCAM-206ENST00000490733 EPS8L1Q8TE68 723 aa6.49□□□□□ -1.37
EPCAM-206ENST00000490733 HMX1Q9NP08 348 aaPredicted RBP6.49□□□□□ -1.37
EPCAM-206ENST00000490733 ATP13A2Q9NQ11 1180 aa6.49□□□□□ -1.37
EPCAM-206ENST00000490733 LMO7Q8WWI1 1683 aa6.49□□□□□ -1.37
EPCAM-206ENST00000490733 FLT4P35916 1363 aa6.48□□□□□ -1.37
EPCAM-206ENST00000490733 KIF24Q5T7B8 1368 aa6.48□□□□□ -1.37
EPCAM-206ENST00000490733 SENP3-EIF4A1A0A087X0R7 540 aa6.48□□□□□ -1.37
EPCAM-206ENST00000490733 HOXC9P31274 260 aa6.48□□□□□ -1.37
EPCAM-206ENST00000490733 NNTQ13423 1086 aa6.48□□□□□ -1.37
EPCAM-206ENST00000490733 EIF4A2Q14240 407 aaKnown RBP6.48□□□□□ -1.37
EPCAM-206ENST00000490733 ARID5BQ14865 1188 aa6.48□□□□□ -1.37
EPCAM-206ENST00000490733 KCNH5Q8NCM2 988 aa6.48□□□□□ -1.37
EPCAM-206ENST00000490733 CDK15Q96Q40 435 aa6.48□□□□□ -1.37
EPCAM-206ENST00000490733 RTL1A6NKG5 1358 aa6.47□□□□□ -1.37
EPCAM-206ENST00000490733 CPDO75976 1380 aa6.47□□□□□ -1.37
EPCAM-206ENST00000490733 DLG5Q8TDM6 1919 aa6.47□□□□□ -1.37
EPCAM-206ENST00000490733 CAMTA1Q9Y6Y1 1673 aa6.47□□□□□ -1.37
EPCAM-206ENST00000490733 MAGEB6P1A0A0J9YX57 407 aa6.47□□□□□ -1.37
EPCAM-206ENST00000490733 DIAPH1O60610 1272 aaKnown RBP6.47□□□□□ -1.37
EPCAM-206ENST00000490733 ADH1CP00326 375 aa6.47□□□□□ -1.37
EPCAM-206ENST00000490733 ZC3H6P61129 1189 aaKnown RBP6.47□□□□□ -1.37
EPCAM-206ENST00000490733 IP6K1Q92551 441 aa6.47□□□□□ -1.37
EPCAM-206ENST00000490733 GPKOWQ92917 476 aaPredicted RBP eCLIP6.47□□□□□ -1.37
EPCAM-206ENST00000490733 LRRC59Q96AG4 307 aaKnown RBP6.47□□□□□ -1.37
EPCAM-206ENST00000490733 CFAP53Q96M91 514 aa6.47□□□□□ -1.37
EPCAM-206ENST00000490733 C1QTNF2Q9BXJ5 285 aa6.47□□□□□ -1.37
EPCAM-206ENST00000490733 FKBPLQ9UIM3 349 aa6.47□□□□□ -1.37
EPCAM-206ENST00000490733 KIAA0232Q92628 1395 aa6.46□□□□□ -1.37
EPCAM-206ENST00000490733 ABCC6O95255 1503 aa6.46□□□□□ -1.37
EPCAM-206ENST00000490733 CAPN5O15484 640 aaPredicted RBP6.46□□□□□ -1.38
EPCAM-206ENST00000490733 GDF11O95390 407 aa6.46□□□□□ -1.38
EPCAM-206ENST00000490733 GRM5P41594 1212 aa6.46□□□□□ -1.38
EPCAM-206ENST00000490733 AMPHP49418 695 aa6.46□□□□□ -1.38
EPCAM-206ENST00000490733 HNRNPUQ00839 825 aaKnown RBP eCLIP6.46□□□□□ -1.38
EPCAM-206ENST00000490733 WDR43Q15061 677 aaKnown RBP eCLIP6.46□□□□□ -1.38
EPCAM-206ENST00000490733 PDXDC2PQ6P474 469 aa6.46□□□□□ -1.38
EPCAM-206ENST00000490733 CCDC146Q8IYE0 955 aa6.46□□□□□ -1.38
EPCAM-206ENST00000490733 PLEKHF1Q96S99 279 aa6.46□□□□□ -1.38
EPCAM-206ENST00000490733 FAM208AQ9UK61 1670 aaKnown RBP6.45□□□□□ -1.38
EPCAM-206ENST00000490733 NCAPD2Q15021 1401 aa6.45□□□□□ -1.38
EPCAM-206ENST00000490733 U2SURPO15042 1029 aaKnown RBP6.45□□□□□ -1.38
EPCAM-206ENST00000490733 U2AF1L5P0DN76 240 aaPredicted RBP6.45□□□□□ -1.38
EPCAM-206ENST00000490733 BMP1P13497 986 aa6.45□□□□□ -1.38
EPCAM-206ENST00000490733 SNRPBP14678 240 aaKnown RBP6.45□□□□□ -1.38
EPCAM-206ENST00000490733 U2AF1Q01081 240 aaKnown RBP eCLIP6.45□□□□□ -1.38
EPCAM-206ENST00000490733 CHRNA2Q15822 529 aa6.45□□□□□ -1.38
EPCAM-206ENST00000490733 TMEM132AQ24JP5 1023 aa6.45□□□□□ -1.38
EPCAM-206ENST00000490733 AEBP1Q8IUX7 1158 aa6.45□□□□□ -1.38
EPCAM-206ENST00000490733 IRF7Q92985 503 aa6.45□□□□□ -1.38
EPCAM-206ENST00000490733 OCSTAMPQ9BR26 566 aa6.45□□□□□ -1.38
EPCAM-206ENST00000490733 IGSF1Q8N6C5 1336 aa6.45□□□□□ -1.38
EPCAM-206ENST00000490733 KDRP35968 1356 aa6.44□□□□□ -1.38
EPCAM-206ENST00000490733 COL14A1Q05707 1796 aaKnown RBP6.44□□□□□ -1.38
EPCAM-206ENST00000490733 ZBTB7CA1YPR0 619 aa6.44□□□□□ -1.38
EPCAM-206ENST00000490733 FAM83GA6ND36 823 aa6.44□□□□□ -1.38
EPCAM-206ENST00000490733 NR3C2P08235 984 aa6.44□□□□□ -1.38
EPCAM-206ENST00000490733 HMOX1P09601 288 aa6.44□□□□□ -1.38
EPCAM-206ENST00000490733 TIMP2P16035 220 aa6.44□□□□□ -1.38
EPCAM-206ENST00000490733 ERFEQ4G0M1 354 aa6.44□□□□□ -1.38
EPCAM-206ENST00000490733 TMEM259Q4ZIN3 620 aa6.44□□□□□ -1.38
EPCAM-206ENST00000490733 TRIM46Q7Z4K8 759 aa6.44□□□□□ -1.38
EPCAM-206ENST00000490733 TRMT44Q8IYL2 757 aaKnown RBP6.44□□□□□ -1.38
EPCAM-206ENST00000490733 LTV1Q96GA3 475 aaPredicted RBP6.44□□□□□ -1.38
EPCAM-206ENST00000490733 PHACTR3Q96KR7 559 aa6.44□□□□□ -1.38
EPCAM-206ENST00000490733 ARHGAP9Q9BRR9 750 aa6.44□□□□□ -1.38
EPCAM-206ENST00000490733 KLF16Q9BXK1 252 aaPredicted RBP6.44□□□□□ -1.38
EPCAM-206ENST00000490733 SENP2Q9HC62 589 aa6.44□□□□□ -1.38
EPCAM-206ENST00000490733 NUDCQ9Y266 331 aa6.44□□□□□ -1.38
EPCAM-206ENST00000490733 PLCH1Q4KWH8 1693 aa6.44□□□□□ -1.38
EPCAM-206ENST00000490733 NRAPQ86VF7 1730 aa6.44□□□□□ -1.38
EPCAM-206ENST00000490733 ZBED9Q6R2W3 1325 aa6.44□□□□□ -1.38
EPCAM-206ENST00000490733 ZC3H4Q9UPT8 1303 aaKnown RBP6.44□□□□□ -1.38
EPCAM-206ENST00000490733 VIRMAQ69YN4 1812 aaKnown RBP6.43□□□□□ -1.38
EPCAM-206ENST00000490733 COL5A2P05997 1499 aaPredicted RBP6.43□□□□□ -1.38
EPCAM-206ENST00000490733 APAF1O14727 1248 aa6.43□□□□□ -1.38
EPCAM-206ENST00000490733 PRKAR2BP31323 418 aa6.43□□□□□ -1.38
EPCAM-206ENST00000490733 HSPA1LP34931 641 aa6.43□□□□□ -1.38
EPCAM-206ENST00000490733 GSK3AP49840 483 aa6.43□□□□□ -1.38
EPCAM-206ENST00000490733 WDR4P57081 412 aaKnown RBP6.43□□□□□ -1.38
EPCAM-206ENST00000490733 NR5A1Q13285 461 aa6.43□□□□□ -1.38
EPCAM-206ENST00000490733 LCE3BQ5TA77 95 aa6.43□□□□□ -1.38
EPCAM-206ENST00000490733 NBPF6Q5VWK0 638 aa6.43□□□□□ -1.38
EPCAM-206ENST00000490733 SULT6B1Q6IMI4 303 aa6.43□□□□□ -1.38
EPCAM-206ENST00000490733 VASH1Q7L8A9 365 aaPredicted RBP6.43□□□□□ -1.38
EPCAM-206ENST00000490733 ANKRD24Q8TF21 1146 aa6.43□□□□□ -1.38
EPCAM-206ENST00000490733 RUNDC1Q96C34 613 aa6.43□□□□□ -1.38
EPCAM-206ENST00000490733 TRIM47Q96LD4 638 aa6.43□□□□□ -1.38
EPCAM-206ENST00000490733 NBPF4Q96M43 638 aa6.43□□□□□ -1.38
EPCAM-206ENST00000490733 TRIM34Q9BYJ4 488 aa6.43□□□□□ -1.38
EPCAM-206ENST00000490733 MAP4K5Q9Y4K4 846 aa6.43□□□□□ -1.38
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms