RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 CACNA1SQ13698 1873 aa19.79■□□□□ 0.76
PCCB-218ENST00000490504 ABCC4O15439 1325 aa19.79■□□□□ 0.76
PCCB-218ENST00000490504 DDNO94850 711 aaPredicted RBP19.79■□□□□ 0.76
PCCB-218ENST00000490504 TRIM28Q13263 835 aaKnown RBP19.79■□□□□ 0.76
PCCB-218ENST00000490504 PSMD1Q99460 953 aa19.79■□□□□ 0.76
PCCB-218ENST00000490504 IPO8O15397 1037 aaKnown RBP19.78■□□□□ 0.76
PCCB-218ENST00000490504 IARSP41252 1262 aaKnown RBP19.78■□□□□ 0.76
PCCB-218ENST00000490504 RTL5Q5HYW3 569 aaPredicted RBP19.78■□□□□ 0.76
PCCB-218ENST00000490504 CHMP4AQ9BY43 222 aa19.78■□□□□ 0.76
PCCB-218ENST00000490504 COG6Q9Y2V7 657 aa19.78■□□□□ 0.76
PCCB-218ENST00000490504 RLBP1P12271 317 aa19.77■□□□□ 0.76
PCCB-218ENST00000490504 AAMPQ13685 434 aa19.77■□□□□ 0.76
PCCB-218ENST00000490504 ATF7IPQ6VMQ6 1270 aa19.77■□□□□ 0.76
PCCB-218ENST00000490504 FTSJ3Q8IY81 847 aaKnown RBP19.77■□□□□ 0.76
PCCB-218ENST00000490504 DZIP1LQ8IYY4 767 aaKnown RBP19.77■□□□□ 0.76
PCCB-218ENST00000490504 MYD88Q99836 296 aa19.77■□□□□ 0.76
PCCB-218ENST00000490504 NOB1Q9ULX3 412 aaKnown RBP19.77■□□□□ 0.76
PCCB-218ENST00000490504 MRPL50Q8N5N7 158 aaKnown RBP19.76■□□□□ 0.75
PCCB-218ENST00000490504 TNNQ9UQP3 1299 aa19.76■□□□□ 0.75
PCCB-218ENST00000490504 ATP6V0A2Q9Y487 856 aa19.76■□□□□ 0.75
PCCB-218ENST00000490504 TIAM2Q8IVF5 1701 aa19.76■□□□□ 0.75
PCCB-218ENST00000490504 TRIM27P14373 513 aa19.76■□□□□ 0.75
PCCB-218ENST00000490504 DDX46Q7L014 1031 aaKnown RBP19.76■□□□□ 0.75
PCCB-218ENST00000490504 ZNF541Q9H0D2 1346 aa19.75■□□□□ 0.75
PCCB-218ENST00000490504 BBOX1O75936 387 aa19.75■□□□□ 0.75
PCCB-218ENST00000490504 FSTL1Q12841 308 aa19.75■□□□□ 0.75
PCCB-218ENST00000490504 CCDC88AQ3V6T2 1871 aa19.75■□□□□ 0.75
PCCB-218ENST00000490504 ANKRD36CQ5JPF3 1778 aa19.74■□□□□ 0.75
PCCB-218ENST00000490504 DDX58O95786 925 aaKnown RBP19.74■□□□□ 0.75
PCCB-218ENST00000490504 GRIPAP1Q4V328 841 aa19.74■□□□□ 0.75
PCCB-218ENST00000490504 CLUAP1Q96AJ1 413 aa19.74■□□□□ 0.75
PCCB-218ENST00000490504 METTL22Q9BUU2 404 aaPredicted RBP19.74■□□□□ 0.75
PCCB-218ENST00000490504 STK31Q9BXU1 1019 aa19.74■□□□□ 0.75
PCCB-218ENST00000490504 MAP3K2Q9Y2U5 619 aa19.74■□□□□ 0.75
PCCB-218ENST00000490504 FZD9O00144 591 aa19.73■□□□□ 0.75
PCCB-218ENST00000490504 IRS4O14654 1257 aaPredicted RBP19.73■□□□□ 0.75
PCCB-218ENST00000490504 GRAPQ13588 217 aa19.73■□□□□ 0.75
PCCB-218ENST00000490504 MVPQ14764 893 aaKnown RBP19.73■□□□□ 0.75
PCCB-218ENST00000490504 G2E3Q7L622 706 aa19.73■□□□□ 0.75
PCCB-218ENST00000490504 GRAPLQ8TC17 118 aaPredicted RBP19.73■□□□□ 0.75
PCCB-218ENST00000490504 ARHGAP45Q92619 1136 aa19.73■□□□□ 0.75
PCCB-218ENST00000490504 PI4KAP2A4QPH2 592 aa19.73■□□□□ 0.75
PCCB-218ENST00000490504 SLC4A2P04920 1241 aa19.73■□□□□ 0.75
PCCB-218ENST00000490504 SF3B3Q15393 1217 aaKnown RBP19.73■□□□□ 0.75
PCCB-218ENST00000490504 KSR2Q6VAB6 950 aa19.73■□□□□ 0.75
PCCB-218ENST00000490504 SP8Q8IXZ3 490 aa19.73■□□□□ 0.75
PCCB-218ENST00000490504 PI4KAP1Q8N8J0 262 aa19.73■□□□□ 0.75
PCCB-218ENST00000490504 ZBTB38Q8NAP3 1195 aaPredicted RBP19.73■□□□□ 0.75
PCCB-218ENST00000490504 SMC1BQ8NDV3 1235 aa19.73■□□□□ 0.75
PCCB-218ENST00000490504 JARID2Q92833 1246 aaPredicted RBP19.73■□□□□ 0.75
PCCB-218ENST00000490504 TMX4Q9H1E5 349 aaPredicted RBP19.73■□□□□ 0.75
PCCB-218ENST00000490504 CACNA1FO60840 1977 aa19.72■□□□□ 0.75
PCCB-218ENST00000490504 APLP1P51693 650 aa19.72■□□□□ 0.75
PCCB-218ENST00000490504 CCDC191Q8NCU4 936 aa19.72■□□□□ 0.75
PCCB-218ENST00000490504 JDP2Q8WYK2 163 aa19.72■□□□□ 0.75
PCCB-218ENST00000490504 LARGE2Q8N3Y3 721 aa19.71■□□□□ 0.75
PCCB-218ENST00000490504 L3MBTL3Q96JM7 780 aaPredicted RBP19.71■□□□□ 0.75
PCCB-218ENST00000490504 CWC25Q9NXE8 425 aaPredicted RBP19.71■□□□□ 0.75
PCCB-218ENST00000490504 DICER1Q9UPY3 1922 aaKnown RBP19.71■□□□□ 0.75
PCCB-218ENST00000490504 CENPQQ7L2Z9 268 aaPredicted RBP19.7■□□□□ 0.74
PCCB-218ENST00000490504 CELF1Q92879 486 aaKnown RBP19.7■□□□□ 0.74
PCCB-218ENST00000490504 WDR90Q96KV7 1748 aa19.7■□□□□ 0.74
PCCB-218ENST00000490504 COL4A5P29400 1685 aa19.7■□□□□ 0.74
PCCB-218ENST00000490504 PCCAP05165 728 aaPredicted RBP19.69■□□□□ 0.74
PCCB-218ENST00000490504 IGKV5-2P06315 115 aa19.69■□□□□ 0.74
PCCB-218ENST00000490504 POTEIP0CG38 1075 aa19.69■□□□□ 0.74
PCCB-218ENST00000490504 POTEJP0CG39 1038 aa19.69■□□□□ 0.74
PCCB-218ENST00000490504 DPP8Q6V1X1 898 aaPredicted RBP19.69■□□□□ 0.74
PCCB-218ENST00000490504 MPNDQ8N594 471 aa19.69■□□□□ 0.74
PCCB-218ENST00000490504 RTFDC1Q9BY42 306 aaPredicted RBP19.69■□□□□ 0.74
PCCB-218ENST00000490504 DDX19BQ9UMR2 479 aa19.69■□□□□ 0.74
PCCB-218ENST00000490504 PPIP5K2O43314 1243 aa19.68■□□□□ 0.74
PCCB-218ENST00000490504 HTRA3P83110 453 aa19.68■□□□□ 0.74
PCCB-218ENST00000490504 AOC3Q16853 763 aa19.68■□□□□ 0.74
PCCB-218ENST00000490504 TSHZ2Q9NRE2 1034 aa19.68■□□□□ 0.74
PCCB-218ENST00000490504 FLIIQ13045 1269 aa19.67■□□□□ 0.74
PCCB-218ENST00000490504 ITPRIPQ8IWB1 547 aa19.67■□□□□ 0.74
PCCB-218ENST00000490504 TMEM57Q8N5G2 664 aa19.67■□□□□ 0.74
PCCB-218ENST00000490504 TAF1DQ9H5J8 278 aaPredicted RBP19.67■□□□□ 0.74
PCCB-218ENST00000490504 IQCA1LA6NCM1 817 aa19.66■□□□□ 0.74
PCCB-218ENST00000490504 EIF6P56537 245 aaKnown RBP19.66■□□□□ 0.74
PCCB-218ENST00000490504 CWF19L2Q2TBE0 894 aaKnown RBP19.66■□□□□ 0.74
PCCB-218ENST00000490504 TMC4Q7Z404 712 aa19.66■□□□□ 0.74
PCCB-218ENST00000490504 GPC2Q8N158 579 aa19.66■□□□□ 0.74
PCCB-218ENST00000490504 SUPT20HQ8NEM7 779 aa19.66■□□□□ 0.74
PCCB-218ENST00000490504 API5Q9BZZ5 524 aaKnown RBP19.66■□□□□ 0.74
PCCB-218ENST00000490504 SEC31BQ9NQW1 1179 aa19.66■□□□□ 0.74
PCCB-218ENST00000490504 GJA3Q9Y6H8 435 aa19.66■□□□□ 0.74
PCCB-218ENST00000490504 LAMB2P55268 1798 aa19.66■□□□□ 0.74
PCCB-218ENST00000490504 NIM1KQ8IY84 436 aa19.65■□□□□ 0.74
PCCB-218ENST00000490504 VPS33BQ9H267 617 aa19.65■□□□□ 0.74
PCCB-218ENST00000490504 DDX60Q8IY21 1712 aaKnown RBP19.65■□□□□ 0.74
PCCB-218ENST00000490504 PDE8AO60658 829 aa19.65■□□□□ 0.74
PCCB-218ENST00000490504 HSP90B1P14625 803 aaKnown RBP19.65■□□□□ 0.74
PCCB-218ENST00000490504 RPS8P62241 208 aaKnown RBP19.65■□□□□ 0.74
PCCB-218ENST00000490504 NEXNQ0ZGT2 675 aa19.65■□□□□ 0.74
PCCB-218ENST00000490504 DNAJC5GQ8N7S2 189 aa19.65■□□□□ 0.74
PCCB-218ENST00000490504 CCDC85AQ96PX6 553 aaPredicted RBP19.65■□□□□ 0.74
PCCB-218ENST00000490504 HACL1Q9UJ83 578 aa19.65■□□□□ 0.74
PCCB-218ENST00000490504 NEURL1BA8MQ27 555 aa19.64■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms