RNA–Protein interactions for RNA: ENST00000490360.1

UPK3B-205, Transcript of uroplakin 3B, humanhuman

TSL 2

Gene UPK3B, Length 524 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPK3B-205ENST00000490360 HSP90AB3PQ58FF7 597 aa25.97■■□□□ 1.75
UPK3B-205ENST00000490360 TMC4Q7Z404 712 aa25.96■■□□□ 1.75
UPK3B-205ENST00000490360 PLEKHF1Q96S99 279 aa25.96■■□□□ 1.75
UPK3B-205ENST00000490360 GLIS2Q9BZE0 524 aaPredicted RBP25.96■■□□□ 1.75
UPK3B-205ENST00000490360 ANKRD36CQ5JPF3 1778 aa25.96■■□□□ 1.75
UPK3B-205ENST00000490360 NOGQ13253 232 aa25.95■■□□□ 1.74
UPK3B-205ENST00000490360 TSKSQ9UJT2 592 aa25.95■■□□□ 1.74
UPK3B-205ENST00000490360 H7C1D1 291 aa25.94■■□□□ 1.74
UPK3B-205ENST00000490360 DDX46Q7L014 1031 aaKnown RBP25.94■■□□□ 1.74
UPK3B-205ENST00000490360 MAPK8IP3Q9UPT6 1336 aa25.93■■□□□ 1.74
UPK3B-205ENST00000490360 CASP8AP2Q9UKL3 1982 aa25.93■■□□□ 1.74
UPK3B-205ENST00000490360 LRP10Q7Z4F1 713 aa25.93■■□□□ 1.74
UPK3B-205ENST00000490360 SLC51AQ86UW1 340 aa25.93■■□□□ 1.74
UPK3B-205ENST00000490360 MCOLN1Q9GZU1 580 aa25.93■■□□□ 1.74
UPK3B-205ENST00000490360 BABAM1Q9NWV8 329 aa25.93■■□□□ 1.74
UPK3B-205ENST00000490360 THUMPD2Q9BTF0 503 aaKnown RBP25.92■■□□□ 1.74
UPK3B-205ENST00000490360 CNOT7Q9UIV1 285 aaKnown RBP25.92■■□□□ 1.74
UPK3B-205ENST00000490360 TSPYL4Q9UJ04 414 aa25.92■■□□□ 1.74
UPK3B-205ENST00000490360 RAD17O75943 681 aa25.91■■□□□ 1.74
UPK3B-205ENST00000490360 ZNF408Q9H9D4 720 aa25.91■■□□□ 1.74
UPK3B-205ENST00000490360 LAMB2P55268 1798 aa25.9■■□□□ 1.74
UPK3B-205ENST00000490360 HIRAP54198 1017 aaPredicted RBP25.9■■□□□ 1.74
UPK3B-205ENST00000490360 GRAPQ13588 217 aa25.9■■□□□ 1.74
UPK3B-205ENST00000490360 PDIA6Q15084 440 aa25.9■■□□□ 1.74
UPK3B-205ENST00000490360 GRAPLQ8TC17 118 aaPredicted RBP25.9■■□□□ 1.74
UPK3B-205ENST00000490360 DPF2Q92785 391 aa25.9■■□□□ 1.74
UPK3B-205ENST00000490360 EIF2S2P20042 333 aaKnown RBP25.89■■□□□ 1.74
UPK3B-205ENST00000490360 NLRP10Q86W26 655 aa25.89■■□□□ 1.74
UPK3B-205ENST00000490360 PCDH10Q9P2E7 1040 aa25.89■■□□□ 1.74
UPK3B-205ENST00000490360 SH3TC1Q8TE82 1336 aa25.88■■□□□ 1.73
UPK3B-205ENST00000490360 DGKZQ13574 1117 aa25.88■■□□□ 1.73
UPK3B-205ENST00000490360 CFAP44Q96MT7 982 aa25.88■■□□□ 1.73
UPK3B-205ENST00000490360 TRMT112Q9UI30 125 aaKnown RBP25.88■■□□□ 1.73
UPK3B-205ENST00000490360 HUNKP57058 714 aa25.87■■□□□ 1.73
UPK3B-205ENST00000490360 TRPM4Q8TD43 1214 aa25.87■■□□□ 1.73
UPK3B-205ENST00000490360 HCLS1P14317 486 aaPredicted RBP25.86■■□□□ 1.73
UPK3B-205ENST00000490360 TCIRG1Q13488 830 aa25.86■■□□□ 1.73
UPK3B-205ENST00000490360 MICALL2Q8IY33 904 aa25.86■■□□□ 1.73
UPK3B-205ENST00000490360 COPS6Q7L5N1 327 aa25.85■■□□□ 1.73
UPK3B-205ENST00000490360 CCDC102AQ96A19 550 aa25.85■■□□□ 1.73
UPK3B-205ENST00000490360 SAGE1Q9NXZ1 904 aa25.85■■□□□ 1.73
UPK3B-205ENST00000490360 YDJCA8MPS7 323 aa25.84■■□□□ 1.73
UPK3B-205ENST00000490360 RPS12P25398 132 aaKnown RBP25.84■■□□□ 1.73
UPK3B-205ENST00000490360 PROSER3Q2NL68 480 aa25.84■■□□□ 1.73
UPK3B-205ENST00000490360 USP48Q86UV5 1035 aa25.84■■□□□ 1.73
UPK3B-205ENST00000490360 LRRC37AA6NMS7 1700 aa25.83■■□□□ 1.73
UPK3B-205ENST00000490360 LMOD3Q0VAK6 560 aa25.83■■□□□ 1.73
UPK3B-205ENST00000490360 WASHC4Q2M389 1173 aa25.83■■□□□ 1.73
UPK3B-205ENST00000490360 C2orf69Q8N8R5 385 aa25.83■■□□□ 1.73
UPK3B-205ENST00000490360 RGMBQ6NW40 437 aa25.82■■□□□ 1.72
UPK3B-205ENST00000490360 KRT26Q7Z3Y9 468 aa25.82■■□□□ 1.72
UPK3B-205ENST00000490360 XAGE3Q8WTP9 111 aa25.82■■□□□ 1.72
UPK3B-205ENST00000490360 AIMP1Q12904 312 aaKnown RBP25.81■■□□□ 1.72
UPK3B-205ENST00000490360 DCPSQ96C86 337 aaKnown RBP25.81■■□□□ 1.72
UPK3B-205ENST00000490360 ANXA1P04083 346 aa25.8■■□□□ 1.72
UPK3B-205ENST00000490360 RIPK4P57078 832 aa25.8■■□□□ 1.72
UPK3B-205ENST00000490360 GBA2Q9HCG7 927 aaPredicted RBP25.8■■□□□ 1.72
UPK3B-205ENST00000490360 DUOX1Q9NRD9 1551 aa25.8■■□□□ 1.72
UPK3B-205ENST00000490360 TNRC18O15417 2968 aaPredicted RBP25.79■■□□□ 1.72
UPK3B-205ENST00000490360 PDE4DIPQ5VU43 2346 aa25.79■■□□□ 1.72
UPK3B-205ENST00000490360 PSMD14O00487 310 aa25.79■■□□□ 1.72
UPK3B-205ENST00000490360 EYA3Q99504 573 aa25.79■■□□□ 1.72
UPK3B-205ENST00000490360 NSFL1CQ9UNZ2 370 aaKnown RBP25.79■■□□□ 1.72
UPK3B-205ENST00000490360 ZBTB12Q9Y330 459 aaPredicted RBP25.79■■□□□ 1.72
UPK3B-205ENST00000490360 TAF1P21675 1872 aa25.79■■□□□ 1.72
UPK3B-205ENST00000490360 POLR2AP24928 1970 aaKnown RBP25.78■■□□□ 1.72
UPK3B-205ENST00000490360 SAMD7Q7Z3H4 446 aa25.78■■□□□ 1.72
UPK3B-205ENST00000490360 SHTN1A0MZ66 631 aa25.77■■□□□ 1.72
UPK3B-205ENST00000490360 FAM155AB1AL88 458 aaPredicted RBP25.77■■□□□ 1.72
UPK3B-205ENST00000490360 SF3B3Q15393 1217 aaKnown RBP25.77■■□□□ 1.72
UPK3B-205ENST00000490360 REM2Q8IYK8 340 aaPredicted RBP25.77■■□□□ 1.72
UPK3B-205ENST00000490360 ZIC5Q96T25 663 aa25.77■■□□□ 1.72
UPK3B-205ENST00000490360 DDX60Q8IY21 1712 aaKnown RBP25.77■■□□□ 1.72
UPK3B-205ENST00000490360 AKAP11Q9UKA4 1901 aa25.76■■□□□ 1.72
UPK3B-205ENST00000490360 C6orf229H3BNL8 230 aa25.76■■□□□ 1.71
UPK3B-205ENST00000490360 TBC1D10BQ4KMP7 808 aaPredicted RBP25.76■■□□□ 1.71
UPK3B-205ENST00000490360 ZNF157P51786 506 aaPredicted RBP25.75■■□□□ 1.71
UPK3B-205ENST00000490360 PLBD2Q8NHP8 589 aa25.75■■□□□ 1.71
UPK3B-205ENST00000490360 DBNDD1Q9H9R9 158 aa25.75■■□□□ 1.71
UPK3B-205ENST00000490360 SULF1Q8IWU6 871 aa25.74■■□□□ 1.71
UPK3B-205ENST00000490360 NECTIN2Q92692 538 aa25.74■■□□□ 1.71
UPK3B-205ENST00000490360 ECE2O60344 883 aa25.73■■□□□ 1.71
UPK3B-205ENST00000490360 KIF23Q02241 960 aaPredicted RBP25.73■■□□□ 1.71
UPK3B-205ENST00000490360 POLLQ9UGP5 575 aa25.73■■□□□ 1.71
UPK3B-205ENST00000490360 RIMBP2O15034 1052 aa25.72■■□□□ 1.71
UPK3B-205ENST00000490360 TMPOP42166 694 aaKnown RBP25.72■■□□□ 1.71
UPK3B-205ENST00000490360 ANKRD13DQ6ZTN6 518 aa25.72■■□□□ 1.71
UPK3B-205ENST00000490360 CELF1Q92879 486 aaKnown RBP25.72■■□□□ 1.71
UPK3B-205ENST00000490360 RNF186Q9NXI6 227 aa25.72■■□□□ 1.71
UPK3B-205ENST00000490360 HOXB7P09629 217 aa25.71■■□□□ 1.71
UPK3B-205ENST00000490360 HSP90B1P14625 803 aaKnown RBP25.71■■□□□ 1.71
UPK3B-205ENST00000490360 KIF4BQ2VIQ3 1234 aa25.71■■□□□ 1.71
UPK3B-205ENST00000490360 ISCA1Q9BUE6 129 aa25.71■■□□□ 1.71
UPK3B-205ENST00000490360 CHL1O00533 1208 aa25.7■■□□□ 1.7
UPK3B-205ENST00000490360 TRPA1O75762 1119 aa25.7■■□□□ 1.7
UPK3B-205ENST00000490360 EGFRP00533 1210 aa25.7■■□□□ 1.7
UPK3B-205ENST00000490360 SLC10A3P09131 477 aa25.7■■□□□ 1.7
UPK3B-205ENST00000490360 VIL1P09327 827 aaKnown RBP25.7■■□□□ 1.7
UPK3B-205ENST00000490360 GPSM2P81274 684 aa25.7■■□□□ 1.7
UPK3B-205ENST00000490360 RBM26Q5T8P6 1007 aaKnown RBP25.7■■□□□ 1.7
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms