RNA–Protein interactions for RNA: ENST00000489948.5

TRAIP-210, Transcript of TRAF interacting protein, humanhuman

TSL 4

Gene TRAIP, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAIP-210ENST00000489948 MSL1Q68DK7 614 aa16.66■□□□□ 0.26
TRAIP-210ENST00000489948 TTLL11Q8NHH1 800 aa16.66■□□□□ 0.26
TRAIP-210ENST00000489948 RWDD1Q9H446 243 aaPredicted RBP16.66■□□□□ 0.26
TRAIP-210ENST00000489948 SRGAP3O43295 1099 aa16.65■□□□□ 0.26
TRAIP-210ENST00000489948 GTF2E1P29083 439 aaPredicted RBP16.65■□□□□ 0.26
TRAIP-210ENST00000489948 SF3B3Q15393 1217 aaKnown RBP16.65■□□□□ 0.26
TRAIP-210ENST00000489948 LMBR1LQ6UX01 489 aa16.65■□□□□ 0.26
TRAIP-210ENST00000489948 KLRG2A4D1S0 409 aaPredicted RBP16.64■□□□□ 0.25
TRAIP-210ENST00000489948 HCLS1P14317 486 aaPredicted RBP16.64■□□□□ 0.25
TRAIP-210ENST00000489948 CRY2Q49AN0 593 aa16.64■□□□□ 0.25
TRAIP-210ENST00000489948 CCDC152Q4G0S7 254 aa16.64■□□□□ 0.25
TRAIP-210ENST00000489948 CENPQQ7L2Z9 268 aaPredicted RBP16.64■□□□□ 0.25
TRAIP-210ENST00000489948 KIAA1551Q9HCM1 1747 aa16.63■□□□□ 0.25
TRAIP-210ENST00000489948 NPHP1O15259 732 aa16.63■□□□□ 0.25
TRAIP-210ENST00000489948 RFX5P48382 616 aaPredicted RBP16.63■□□□□ 0.25
TRAIP-210ENST00000489948 FAM161AQ3B820 660 aa16.63■□□□□ 0.25
TRAIP-210ENST00000489948 SMC5Q8IY18 1101 aa16.63■□□□□ 0.25
TRAIP-210ENST00000489948 GCC1Q96CN9 775 aa16.63■□□□□ 0.25
TRAIP-210ENST00000489948 NLRP3Q96P20 1036 aa16.63■□□□□ 0.25
TRAIP-210ENST00000489948 BRIP1Q9BX63 1249 aa16.63■□□□□ 0.25
TRAIP-210ENST00000489948 COPRSQ9NQ92 184 aa16.63■□□□□ 0.25
TRAIP-210ENST00000489948 A0A1B0GUL6 1792 aa16.63■□□□□ 0.25
TRAIP-210ENST00000489948 SPEF2Q9C093 1822 aa16.62■□□□□ 0.25
TRAIP-210ENST00000489948 IGHDP01880 384 aa16.62■□□□□ 0.25
TRAIP-210ENST00000489948 B4GALNT3Q6L9W6 998 aa16.62■□□□□ 0.25
TRAIP-210ENST00000489948 SGIP1Q9BQI5 828 aa16.62■□□□□ 0.25
TRAIP-210ENST00000489948 FBXO3Q9UK99 471 aa16.62■□□□□ 0.25
TRAIP-210ENST00000489948 NOP58Q9Y2X3 529 aaKnown RBP16.62■□□□□ 0.25
TRAIP-210ENST00000489948 LRRC37AA6NMS7 1700 aa16.62■□□□□ 0.25
TRAIP-210ENST00000489948 PTPN12Q05209 780 aaKnown RBP16.61■□□□□ 0.25
TRAIP-210ENST00000489948 C3orf67Q6ZVT6 689 aa16.61■□□□□ 0.25
TRAIP-210ENST00000489948 GREM2Q9H772 168 aa16.61■□□□□ 0.25
TRAIP-210ENST00000489948 DCTPP1Q9H773 170 aa16.61■□□□□ 0.25
TRAIP-210ENST00000489948 PDZRN3Q9UPQ7 1066 aa16.61■□□□□ 0.25
TRAIP-210ENST00000489948 COL4A1P02462 1669 aa16.6■□□□□ 0.25
TRAIP-210ENST00000489948 PSDA5PKW4 1024 aaPredicted RBP16.6■□□□□ 0.25
TRAIP-210ENST00000489948 ZBTB7AO95365 584 aa16.6■□□□□ 0.25
TRAIP-210ENST00000489948 ITGA6P23229 1130 aa16.6■□□□□ 0.25
TRAIP-210ENST00000489948 POLD1P28340 1107 aa16.6■□□□□ 0.25
TRAIP-210ENST00000489948 IFIT5Q13325 482 aaKnown RBP16.6■□□□□ 0.25
TRAIP-210ENST00000489948 CCDC57Q2TAC2 916 aa16.6■□□□□ 0.25
TRAIP-210ENST00000489948 ANKRD18BA2A2Z9 1011 aa16.59■□□□□ 0.25
TRAIP-210ENST00000489948 PDE6BP35913 854 aa16.59■□□□□ 0.25
TRAIP-210ENST00000489948 HSP90AB4PQ58FF6 505 aa16.59■□□□□ 0.25
TRAIP-210ENST00000489948 CHMP3Q9Y3E7 222 aa16.59■□□□□ 0.25
TRAIP-210ENST00000489948 CIAO1O76071 339 aa16.58■□□□□ 0.24
TRAIP-210ENST00000489948 HOXA10P31260 410 aaPredicted RBP16.58■□□□□ 0.24
TRAIP-210ENST00000489948 CDC5LQ99459 802 aaKnown RBP16.58■□□□□ 0.24
TRAIP-210ENST00000489948 TAF1P21675 1872 aa16.58■□□□□ 0.24
TRAIP-210ENST00000489948 BRCA1P38398 1863 aaKnown RBP16.57■□□□□ 0.24
TRAIP-210ENST00000489948 RAB11FIP3O75154 756 aa16.57■□□□□ 0.24
TRAIP-210ENST00000489948 PTGER2P43116 358 aa16.57■□□□□ 0.24
TRAIP-210ENST00000489948 ERC1Q8IUD2 1116 aa16.57■□□□□ 0.24
TRAIP-210ENST00000489948 CCDC24Q8N4L8 307 aa16.57■□□□□ 0.24
TRAIP-210ENST00000489948 ARAP2Q8WZ64 1704 aa16.56■□□□□ 0.24
TRAIP-210ENST00000489948 PA2G4Q9UQ80 394 aaKnown RBP16.56■□□□□ 0.24
TRAIP-210ENST00000489948 EYA2O00167 538 aa16.55■□□□□ 0.24
TRAIP-210ENST00000489948 SURF6O75683 361 aaKnown RBP16.55■□□□□ 0.24
TRAIP-210ENST00000489948 SRGNP10124 158 aa16.55■□□□□ 0.24
TRAIP-210ENST00000489948 TAF7LQ5H9L4 462 aa16.55■□□□□ 0.24
TRAIP-210ENST00000489948 DDX46Q7L014 1031 aaKnown RBP16.55■□□□□ 0.24
TRAIP-210ENST00000489948 RPGRQ92834 1020 aaKnown RBP16.55■□□□□ 0.24
TRAIP-210ENST00000489948 CCDC85AQ96PX6 553 aaPredicted RBP16.55■□□□□ 0.24
TRAIP-210ENST00000489948 CRAMP1Q96RY5 1269 aa16.55■□□□□ 0.24
TRAIP-210ENST00000489948 SEC31BQ9NQW1 1179 aa16.55■□□□□ 0.24
TRAIP-210ENST00000489948 EXOC6BQ9Y2D4 811 aa16.55■□□□□ 0.24
TRAIP-210ENST00000489948 LTBP1Q14766 1721 aa16.55■□□□□ 0.24
TRAIP-210ENST00000489948 CACNA1SQ13698 1873 aa16.54■□□□□ 0.24
TRAIP-210ENST00000489948 NPR1P16066 1061 aa16.54■□□□□ 0.24
TRAIP-210ENST00000489948 IGHMBP2P38935 993 aaKnown RBP16.54■□□□□ 0.24
TRAIP-210ENST00000489948 IL15P40933 162 aaPredicted RBP16.54■□□□□ 0.24
TRAIP-210ENST00000489948 NUCB1Q02818 461 aa16.54■□□□□ 0.24
TRAIP-210ENST00000489948 GRAPQ13588 217 aa16.54■□□□□ 0.24
TRAIP-210ENST00000489948 ATG9AQ7Z3C6 839 aa16.54■□□□□ 0.24
TRAIP-210ENST00000489948 KLHDC4Q8TBB5 520 aa16.54■□□□□ 0.24
TRAIP-210ENST00000489948 GRAPLQ8TC17 118 aaPredicted RBP16.54■□□□□ 0.24
TRAIP-210ENST00000489948 KIF1BPQ96EK5 621 aa16.54■□□□□ 0.24
TRAIP-210ENST00000489948 RBM17Q96I25 401 aaKnown RBP16.54■□□□□ 0.24
TRAIP-210ENST00000489948 SPON1Q9HCB6 807 aa16.54■□□□□ 0.24
TRAIP-210ENST00000489948 ATF5Q9Y2D1 282 aaPredicted RBP16.54■□□□□ 0.24
TRAIP-210ENST00000489948 G3BP1Q13283 466 aaKnown RBP eCLIP16.53■□□□□ 0.24
TRAIP-210ENST00000489948 STYK1Q6J9G0 422 aa16.53■□□□□ 0.24
TRAIP-210ENST00000489948 TMC4Q7Z404 712 aa16.53■□□□□ 0.24
TRAIP-210ENST00000489948 ANKRD18AQ8IVF6 992 aa16.53■□□□□ 0.24
TRAIP-210ENST00000489948 MASTLQ96GX5 879 aa16.53■□□□□ 0.24
TRAIP-210ENST00000489948 LRRCC1Q9C099 1032 aa16.53■□□□□ 0.24
TRAIP-210ENST00000489948 BSDC1Q9NW68 430 aaPredicted RBP16.53■□□□□ 0.24
TRAIP-210ENST00000489948 LDHAL6AQ6ZMR3 332 aa16.52■□□□□ 0.24
TRAIP-210ENST00000489948 RHPN1Q8TCX5 695 aa16.52■□□□□ 0.24
TRAIP-210ENST00000489948 CELF1Q92879 486 aaKnown RBP16.52■□□□□ 0.24
TRAIP-210ENST00000489948 ZNF594Q96JF6 807 aaPredicted RBP16.52■□□□□ 0.24
TRAIP-210ENST00000489948 SIL1Q9H173 461 aa16.52■□□□□ 0.24
TRAIP-210ENST00000489948 RIPOR2Q9Y4F9 1068 aa16.52■□□□□ 0.24
TRAIP-210ENST00000489948 ZNF609O15014 1411 aa16.52■□□□□ 0.23
TRAIP-210ENST00000489948 MROH5Q6ZUA9 1318 aa16.51■□□□□ 0.23
TRAIP-210ENST00000489948 SASH1O94885 1247 aa16.51■□□□□ 0.23
TRAIP-210ENST00000489948 TGFB2P61812 414 aa16.51■□□□□ 0.23
TRAIP-210ENST00000489948 RPS8P62241 208 aaKnown RBP16.51■□□□□ 0.23
TRAIP-210ENST00000489948 CHD1LQ86WJ1 897 aa16.51■□□□□ 0.23
TRAIP-210ENST00000489948 MPHOSPH8Q99549 860 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.7 ms