RNA–Protein interactions for RNA: ENST00000489582.5

MMP11-211, Transcript of matrix metallopeptidase 11, humanhuman

TSL 4

Gene MMP11, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MMP11-211ENST00000489582 FOXO4P98177 505 aa19■□□□□ 0.63
MMP11-211ENST00000489582 CRY2Q49AN0 593 aa19■□□□□ 0.63
MMP11-211ENST00000489582 EPHA10Q5JZY3 1008 aa19■□□□□ 0.63
MMP11-211ENST00000489582 RPGRQ92834 1020 aaKnown RBP19■□□□□ 0.63
MMP11-211ENST00000489582 KAZALD1Q96I82 304 aa19■□□□□ 0.63
MMP11-211ENST00000489582 CRBNQ96SW2 442 aa19■□□□□ 0.63
MMP11-211ENST00000489582 LRRFIP2Q9Y608 721 aaKnown RBP19■□□□□ 0.63
MMP11-211ENST00000489582 COL11A2P13942 1736 aaPredicted RBP19■□□□□ 0.63
MMP11-211ENST00000489582 CSF1RP07333 972 aa18.99■□□□□ 0.63
MMP11-211ENST00000489582 SRGNP10124 158 aa18.99■□□□□ 0.63
MMP11-211ENST00000489582 NPR1P16066 1061 aa18.99■□□□□ 0.63
MMP11-211ENST00000489582 CCDC152Q4G0S7 254 aa18.99■□□□□ 0.63
MMP11-211ENST00000489582 LMBR1LQ6UX01 489 aa18.99■□□□□ 0.63
MMP11-211ENST00000489582 TTLL11Q8NHH1 800 aa18.99■□□□□ 0.63
MMP11-211ENST00000489582 BICC1Q9H694 974 aaKnown RBP18.99■□□□□ 0.63
MMP11-211ENST00000489582 MASTLQ96GX5 879 aa18.98■□□□□ 0.63
MMP11-211ENST00000489582 RBM17Q96I25 401 aaKnown RBP18.98■□□□□ 0.63
MMP11-211ENST00000489582 CCDC85AQ96PX6 553 aaPredicted RBP18.98■□□□□ 0.63
MMP11-211ENST00000489582 ZBTB40Q9NUA8 1239 aa18.98■□□□□ 0.63
MMP11-211ENST00000489582 CACNA1SQ13698 1873 aa18.98■□□□□ 0.63
MMP11-211ENST00000489582 YBX3P16989 372 aaKnown RBP eCLIP18.97■□□□□ 0.63
MMP11-211ENST00000489582 IRX6P78412 446 aaPredicted RBP18.97■□□□□ 0.63
MMP11-211ENST00000489582 STYK1Q6J9G0 422 aa18.97■□□□□ 0.63
MMP11-211ENST00000489582 DDX46Q7L014 1031 aaKnown RBP18.97■□□□□ 0.63
MMP11-211ENST00000489582 ANKRD44Q8N8A2 993 aa18.97■□□□□ 0.63
MMP11-211ENST00000489582 ZNF622Q969S3 477 aaKnown RBP eCLIP18.97■□□□□ 0.63
MMP11-211ENST00000489582 CHMP3Q9Y3E7 222 aa18.97■□□□□ 0.63
MMP11-211ENST00000489582 TNRC6CQ9HCJ0 1690 aaKnown RBP18.96■□□□□ 0.63
MMP11-211ENST00000489582 HOXA10P31260 410 aaPredicted RBP18.96■□□□□ 0.63
MMP11-211ENST00000489582 RABL6Q3YEC7 729 aaPredicted RBP18.96■□□□□ 0.63
MMP11-211ENST00000489582 C1orf115Q9H7X2 142 aa18.96■□□□□ 0.63
MMP11-211ENST00000489582 ARFGEF1Q9Y6D6 1849 aa18.95■□□□□ 0.62
MMP11-211ENST00000489582 KCNA3P22001 575 aa18.95■□□□□ 0.62
MMP11-211ENST00000489582 ALDH1B1P30837 517 aa18.95■□□□□ 0.62
MMP11-211ENST00000489582 CNKSR1Q969H4 720 aa18.95■□□□□ 0.62
MMP11-211ENST00000489582 CRAMP1Q96RY5 1269 aa18.95■□□□□ 0.62
MMP11-211ENST00000489582 GREM2Q9H772 168 aa18.95■□□□□ 0.62
MMP11-211ENST00000489582 PIM2Q9P1W9 311 aa18.95■□□□□ 0.62
MMP11-211ENST00000489582 BCS1LQ9Y276 419 aa18.95■□□□□ 0.62
MMP11-211ENST00000489582 CHD4Q14839 1912 aa18.94■□□□□ 0.62
MMP11-211ENST00000489582 FAM161AQ3B820 660 aa18.94■□□□□ 0.62
MMP11-211ENST00000489582 EXOC6Q8TAG9 804 aa18.94■□□□□ 0.62
MMP11-211ENST00000489582 DDX60Q8IY21 1712 aaKnown RBP18.94■□□□□ 0.62
MMP11-211ENST00000489582 RTL9Q8NET4 1388 aa18.93■□□□□ 0.62
MMP11-211ENST00000489582 ANKRD18BA2A2Z9 1011 aa18.93■□□□□ 0.62
MMP11-211ENST00000489582 ITGA6P23229 1130 aa18.93■□□□□ 0.62
MMP11-211ENST00000489582 IFIT5Q13325 482 aaKnown RBP18.93■□□□□ 0.62
MMP11-211ENST00000489582 CCDC57Q2TAC2 916 aa18.93■□□□□ 0.62
MMP11-211ENST00000489582 SEC31BQ9NQW1 1179 aa18.93■□□□□ 0.62
MMP11-211ENST00000489582 UTRNP46939 3433 aa18.93■□□□□ 0.62
MMP11-211ENST00000489582 GRIN3BO60391 1043 aa18.92■□□□□ 0.62
MMP11-211ENST00000489582 GRAPQ13588 217 aa18.92■□□□□ 0.62
MMP11-211ENST00000489582 AAMPQ13685 434 aa18.92■□□□□ 0.62
MMP11-211ENST00000489582 DALRD3Q5D0E6 543 aaKnown RBP18.92■□□□□ 0.62
MMP11-211ENST00000489582 TTLL6Q8N841 843 aa18.92■□□□□ 0.62
MMP11-211ENST00000489582 GRAPLQ8TC17 118 aaPredicted RBP18.92■□□□□ 0.62
MMP11-211ENST00000489582 CDC5LQ99459 802 aaKnown RBP18.92■□□□□ 0.62
MMP11-211ENST00000489582 LAMB2P55268 1798 aa18.91■□□□□ 0.62
MMP11-211ENST00000489582 BBOX1O75936 387 aa18.91■□□□□ 0.62
MMP11-211ENST00000489582 NEFLP07196 543 aa18.91■□□□□ 0.62
MMP11-211ENST00000489582 RPS8P62241 208 aaKnown RBP18.91■□□□□ 0.62
MMP11-211ENST00000489582 ATP8B2P98198 1209 aa18.91■□□□□ 0.62
MMP11-211ENST00000489582 MTX1Q13505 466 aa18.91■□□□□ 0.62
MMP11-211ENST00000489582 SRGAP3O43295 1099 aa18.9■□□□□ 0.62
MMP11-211ENST00000489582 TAF7LQ5H9L4 462 aa18.9■□□□□ 0.62
MMP11-211ENST00000489582 CEP85Q6P2H3 762 aa18.9■□□□□ 0.62
MMP11-211ENST00000489582 ANKRD18AQ8IVF6 992 aa18.9■□□□□ 0.62
MMP11-211ENST00000489582 RPAP2Q8IXW5 612 aaPredicted RBP18.9■□□□□ 0.62
MMP11-211ENST00000489582 CELF1Q92879 486 aaKnown RBP18.9■□□□□ 0.62
MMP11-211ENST00000489582 IGHMBP2P38935 993 aaKnown RBP18.89■□□□□ 0.61
MMP11-211ENST00000489582 PRPF40BQ6NWY9 871 aaKnown RBP18.89■□□□□ 0.61
MMP11-211ENST00000489582 PNMA6EA0A0J9YXQ4 647 aa18.88■□□□□ 0.61
MMP11-211ENST00000489582 ZNF594Q96JF6 807 aaPredicted RBP18.88■□□□□ 0.61
MMP11-211ENST00000489582 SLX4Q8IY92 1834 aa18.88■□□□□ 0.61
MMP11-211ENST00000489582 PPEF1O14829 653 aaPredicted RBP18.87■□□□□ 0.61
MMP11-211ENST00000489582 RFX5P48382 616 aaPredicted RBP18.87■□□□□ 0.61
MMP11-211ENST00000489582 TMC4Q7Z404 712 aa18.87■□□□□ 0.61
MMP11-211ENST00000489582 MPHOSPH8Q99549 860 aa18.87■□□□□ 0.61
MMP11-211ENST00000489582 POLA2Q14181 598 aa18.86■□□□□ 0.61
MMP11-211ENST00000489582 SSH3Q8TE77 659 aa18.86■□□□□ 0.61
MMP11-211ENST00000489582 TMX4Q9H1E5 349 aaPredicted RBP18.86■□□□□ 0.61
MMP11-211ENST00000489582 BSDC1Q9NW68 430 aaPredicted RBP18.86■□□□□ 0.61
MMP11-211ENST00000489582 ZNF219Q9P2Y4 722 aaPredicted RBP18.86■□□□□ 0.61
MMP11-211ENST00000489582 HMMRO75330 724 aa18.85■□□□□ 0.61
MMP11-211ENST00000489582 PTPN12Q05209 780 aaKnown RBP18.85■□□□□ 0.61
MMP11-211ENST00000489582 LDHAL6AQ6ZMR3 332 aa18.85■□□□□ 0.61
MMP11-211ENST00000489582 ARHGAP27Q6ZUM4 889 aa18.85■□□□□ 0.61
MMP11-211ENST00000489582 SP8Q8IXZ3 490 aa18.85■□□□□ 0.61
MMP11-211ENST00000489582 KLHDC4Q8TBB5 520 aa18.85■□□□□ 0.61
MMP11-211ENST00000489582 ATP6V0A2Q9Y487 856 aa18.85■□□□□ 0.61
MMP11-211ENST00000489582 PCDHB15Q9Y5E8 787 aa18.85■□□□□ 0.61
MMP11-211ENST00000489582 MYH3P11055 1940 aa18.84■□□□□ 0.61
MMP11-211ENST00000489582 C21orf2O43822 256 aa18.84■□□□□ 0.61
MMP11-211ENST00000489582 SIRT2Q8IXJ6 389 aa18.84■□□□□ 0.61
MMP11-211ENST00000489582 C7orf43Q8WVR3 580 aa18.84■□□□□ 0.61
MMP11-211ENST00000489582 COPRSQ9NQ92 184 aa18.84■□□□□ 0.61
MMP11-211ENST00000489582 CNNM1Q9NRU3 951 aa18.84■□□□□ 0.61
MMP11-211ENST00000489582 CC2D2BQ6DHV5 1058 aa18.83■□□□□ 0.6
MMP11-211ENST00000489582 PA2G4Q9UQ80 394 aaKnown RBP18.83■□□□□ 0.6
MMP11-211ENST00000489582 TAF1P21675 1872 aa18.82■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms