RNA–Protein interactions for RNA: ENST00000489535.2

SMC6-209, Transcript of structural maintenance of chromosomes 6, humanhuman

TSL 2

Gene SMC6, Length 550 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-209ENST00000489535 PROCA1Q8NCQ7 364 aaPredicted RBP10.76□□□□□ -0.69
SMC6-209ENST00000489535 BTBD11A6QL63 1104 aa10.75□□□□□ -0.69
SMC6-209ENST00000489535 KIF7Q2M1P5 1343 aa10.75□□□□□ -0.69
SMC6-209ENST00000489535 EIF3AQ14152 1382 aaKnown RBP10.75□□□□□ -0.69
SMC6-209ENST00000489535 KRTAP4-8A0A0G2JLE6 195 aa10.74□□□□□ -0.69
SMC6-209ENST00000489535 PHF24Q9UPV7 400 aa10.74□□□□□ -0.69
SMC6-209ENST00000489535 GNB5O14775 395 aa10.73□□□□□ -0.69
SMC6-209ENST00000489535 USP17L8P0C7I0 530 aa10.73□□□□□ -0.69
SMC6-209ENST00000489535 CYP2U1Q7Z449 544 aa10.73□□□□□ -0.69
SMC6-209ENST00000489535 C14orf93Q9H972 538 aaKnown RBP10.73□□□□□ -0.69
SMC6-209ENST00000489535 GPAMQ9HCL2 828 aa10.73□□□□□ -0.69
SMC6-209ENST00000489535 SLIT1O75093 1534 aa10.73□□□□□ -0.69
SMC6-209ENST00000489535 C2CD2LO14523 706 aa10.72□□□□□ -0.69
SMC6-209ENST00000489535 SCTRP47872 440 aa10.72□□□□□ -0.69
SMC6-209ENST00000489535 SLCO4C1Q6ZQN7 724 aa10.72□□□□□ -0.69
SMC6-209ENST00000489535 ARHGEF10LQ9HCE6 1279 aa10.72□□□□□ -0.69
SMC6-209ENST00000489535 AMPD1P23109 780 aa10.71□□□□□ -0.69
SMC6-209ENST00000489535 PTPRMP28827 1452 aa10.71□□□□□ -0.69
SMC6-209ENST00000489535 SH3D19Q5HYK7 790 aa10.71□□□□□ -0.69
SMC6-209ENST00000489535 CCDC125Q86Z20 511 aa10.71□□□□□ -0.69
SMC6-209ENST00000489535 POLR3GLQ9BT43 218 aa10.71□□□□□ -0.69
SMC6-209ENST00000489535 SEMA6BQ9H3T3 888 aa10.71□□□□□ -0.69
SMC6-209ENST00000489535 ARHGAP23Q9P227 1491 aa10.7□□□□□ -0.7
SMC6-209ENST00000489535 DISP3Q9P2K9 1392 aa10.7□□□□□ -0.7
SMC6-209ENST00000489535 TMEM2Q9UHN6 1383 aa10.7□□□□□ -0.7
SMC6-209ENST00000489535 ZMYM1Q5SVZ6 1142 aa10.7□□□□□ -0.7
SMC6-209ENST00000489535 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.7□□□□□ -0.7
SMC6-209ENST00000489535 GGA1Q9UJY5 639 aa10.7□□□□□ -0.7
SMC6-209ENST00000489535 CHD2O14647 1828 aaKnown RBP10.7□□□□□ -0.7
SMC6-209ENST00000489535 PIK3R2O00459 728 aa10.69□□□□□ -0.7
SMC6-209ENST00000489535 TRAK2O60296 914 aa10.69□□□□□ -0.7
SMC6-209ENST00000489535 DGKGP49619 791 aa10.69□□□□□ -0.7
SMC6-209ENST00000489535 TMEM132EQ6IEE7 984 aa10.69□□□□□ -0.7
SMC6-209ENST00000489535 BTBD6Q96KE9 485 aa10.69□□□□□ -0.7
SMC6-209ENST00000489535 TESK2Q96S53 571 aa10.69□□□□□ -0.7
SMC6-209ENST00000489535 OSBPL3Q9H4L5 887 aa10.69□□□□□ -0.7
SMC6-209ENST00000489535 SLC24A3Q9HC58 644 aa10.69□□□□□ -0.7
SMC6-209ENST00000489535 PCDHB9Q9Y5E1 797 aa10.69□□□□□ -0.7
SMC6-209ENST00000489535 DIP2AQ14689 1571 aa10.69□□□□□ -0.7
SMC6-209ENST00000489535 TMF1P82094 1093 aa10.68□□□□□ -0.7
SMC6-209ENST00000489535 DOC2BQ14184 412 aa10.68□□□□□ -0.7
SMC6-209ENST00000489535 LBRQ14739 615 aaKnown RBP10.68□□□□□ -0.7
SMC6-209ENST00000489535 TRIM34Q9BYJ4 488 aa10.68□□□□□ -0.7
SMC6-209ENST00000489535 ATXN7L1Q9ULK2 861 aaPredicted RBP10.68□□□□□ -0.7
SMC6-209ENST00000489535 TRAK1Q9UPV9 953 aa10.68□□□□□ -0.7
SMC6-209ENST00000489535 DLC1Q96QB1 1528 aa10.68□□□□□ -0.7
SMC6-209ENST00000489535 YTHDC2Q9H6S0 1430 aaKnown RBP10.67□□□□□ -0.7
SMC6-209ENST00000489535 A0A1B0GTH6 734 aa10.67□□□□□ -0.7
SMC6-209ENST00000489535 EPXP11678 715 aa10.67□□□□□ -0.7
SMC6-209ENST00000489535 BMP4P12644 408 aa10.67□□□□□ -0.7
SMC6-209ENST00000489535 CPS1P31327 1500 aa10.67□□□□□ -0.7
SMC6-209ENST00000489535 SBNO2Q9Y2G9 1366 aa10.66□□□□□ -0.7
SMC6-209ENST00000489535 CENPJQ9HC77 1338 aaPredicted RBP10.66□□□□□ -0.7
SMC6-209ENST00000489535 PHKA2P46019 1235 aa10.66□□□□□ -0.7
SMC6-209ENST00000489535 RAB6BQ9NRW1 208 aa10.66□□□□□ -0.7
SMC6-209ENST00000489535 NDFIP2Q9NV92 336 aa10.66□□□□□ -0.7
SMC6-209ENST00000489535 RGPD8O14715 1765 aaPredicted RBP10.66□□□□□ -0.7
SMC6-209ENST00000489535 ITSN1Q15811 1721 aa10.66□□□□□ -0.7
SMC6-209ENST00000489535 PLEKHG1Q9ULL1 1385 aa10.65□□□□□ -0.7
SMC6-209ENST00000489535 TULP4Q9NRJ4 1543 aa10.65□□□□□ -0.7
SMC6-209ENST00000489535 XRN1Q8IZH2 1706 aaKnown RBP10.65□□□□□ -0.7
SMC6-209ENST00000489535 ZBBXA8MT70 800 aa10.65□□□□□ -0.7
SMC6-209ENST00000489535 ANP32CO43423 234 aa10.65□□□□□ -0.7
SMC6-209ENST00000489535 ABHD17AQ96GS6 310 aa10.65□□□□□ -0.7
SMC6-209ENST00000489535 RUBCNLQ9H714 662 aa10.65□□□□□ -0.7
SMC6-209ENST00000489535 NOP53Q9NZM5 478 aaKnown RBP10.65□□□□□ -0.7
SMC6-209ENST00000489535 KIF20BQ96Q89 1820 aa10.64□□□□□ -0.71
SMC6-209ENST00000489535 IL2RAP01589 272 aa10.64□□□□□ -0.71
SMC6-209ENST00000489535 FBXO45P0C2W1 286 aa10.64□□□□□ -0.71
SMC6-209ENST00000489535 FGFR3P22607 806 aa10.64□□□□□ -0.71
SMC6-209ENST00000489535 CTBSQ01459 385 aa10.64□□□□□ -0.71
SMC6-209ENST00000489535 RNF20Q5VTR2 975 aa10.64□□□□□ -0.71
SMC6-209ENST00000489535 THEMISQ8N1K5 641 aaPredicted RBP10.64□□□□□ -0.71
SMC6-209ENST00000489535 BCANQ96GW7 911 aa10.64□□□□□ -0.71
SMC6-209ENST00000489535 ESYT1Q9BSJ8 1104 aa10.64□□□□□ -0.71
SMC6-209ENST00000489535 STK26Q9P289 416 aa10.64□□□□□ -0.71
SMC6-209ENST00000489535 ADAMTS13Q76LX8 1427 aa10.64□□□□□ -0.71
SMC6-209ENST00000489535 SIPA1L2Q9P2F8 1722 aaPredicted RBP10.64□□□□□ -0.71
SMC6-209ENST00000489535 ANKRD26Q9UPS8 1709 aa10.64□□□□□ -0.71
SMC6-209ENST00000489535 SLC24A1O60721 1099 aa10.63□□□□□ -0.71
SMC6-209ENST00000489535 CENPCQ03188 943 aa10.63□□□□□ -0.71
SMC6-209ENST00000489535 FOXD4L6Q3SYB3 417 aaPredicted RBP10.63□□□□□ -0.71
SMC6-209ENST00000489535 CDCA8Q53HL2 280 aa10.63□□□□□ -0.71
SMC6-209ENST00000489535 FOXD4L3Q6VB84 417 aaPredicted RBP10.63□□□□□ -0.71
SMC6-209ENST00000489535 TXNDC2Q86VQ3 553 aa10.63□□□□□ -0.71
SMC6-209ENST00000489535 CNKSR1Q969H4 720 aa10.63□□□□□ -0.71
SMC6-209ENST00000489535 HRH3Q9Y5N1 445 aa10.63□□□□□ -0.71
SMC6-209ENST00000489535 EID1Q9Y6B2 187 aa10.63□□□□□ -0.71
SMC6-209ENST00000489535 LRPPRCP42704 1394 aaKnown RBP10.63□□□□□ -0.71
SMC6-209ENST00000489535 AKAP12Q02952 1782 aa10.62□□□□□ -0.71
SMC6-209ENST00000489535 MED14O60244 1454 aa10.62□□□□□ -0.71
SMC6-209ENST00000489535 BNIP3LO60238 219 aa10.62□□□□□ -0.71
SMC6-209ENST00000489535 LTKP29376 864 aa10.62□□□□□ -0.71
SMC6-209ENST00000489535 RNF135Q8IUD6 432 aa10.62□□□□□ -0.71
SMC6-209ENST00000489535 PCDHB11Q9Y5F2 797 aa10.61□□□□□ -0.71
SMC6-209ENST00000489535 METP08581 1390 aa10.61□□□□□ -0.71
SMC6-209ENST00000489535 USP32Q8NFA0 1604 aa10.6□□□□□ -0.71
SMC6-209ENST00000489535 GNRH1P01148 92 aa10.6□□□□□ -0.71
SMC6-209ENST00000489535 CSB-PGBD3P0DP91 1061 aa10.6□□□□□ -0.71
SMC6-209ENST00000489535 ARAFP10398 606 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms