RNA–Protein interactions for RNA: ENST00000489028.1

RFC4-213, Transcript of replication factor C subunit 4, humanhuman

TSL 3

Gene RFC4, Length 533 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-213ENST00000489028 ZBTB42B2RXF5 422 aa7.2□□□□□ -1.26
RFC4-213ENST00000489028 ABL1P00519 1130 aa7.2□□□□□ -1.26
RFC4-213ENST00000489028 NPR3P17342 541 aa7.2□□□□□ -1.26
RFC4-213ENST00000489028 EIF1AXP47813 144 aaKnown RBP7.2□□□□□ -1.26
RFC4-213ENST00000489028 RASSF7Q02833 373 aa7.2□□□□□ -1.26
RFC4-213ENST00000489028 SUV39H2Q9H5I1 410 aa7.2□□□□□ -1.26
RFC4-213ENST00000489028 UBAP1LF5GYI3 381 aa7.19□□□□□ -1.26
RFC4-213ENST00000489028 RNF225M0QZC1 329 aaPredicted RBP7.19□□□□□ -1.26
RFC4-213ENST00000489028 MMP20O60882 483 aa7.19□□□□□ -1.26
RFC4-213ENST00000489028 ALAS2P22557 587 aa7.19□□□□□ -1.26
RFC4-213ENST00000489028 MLLT1Q03111 559 aaPredicted RBP7.19□□□□□ -1.26
RFC4-213ENST00000489028 COL9A3Q14050 684 aaPredicted RBP7.19□□□□□ -1.26
RFC4-213ENST00000489028 B4GALNT3Q6L9W6 998 aa7.19□□□□□ -1.26
RFC4-213ENST00000489028 C20orf204Q6ZNR8 217 aa7.19□□□□□ -1.26
RFC4-213ENST00000489028 DHX32Q7L7V1 743 aaKnown RBP7.19□□□□□ -1.26
RFC4-213ENST00000489028 PODNQ7Z5L7 613 aa7.19□□□□□ -1.26
RFC4-213ENST00000489028 TXNDC2Q86VQ3 553 aa7.19□□□□□ -1.26
RFC4-213ENST00000489028 BEND7Q8N7W2 519 aaPredicted RBP7.19□□□□□ -1.26
RFC4-213ENST00000489028 PIK3R5Q8WYR1 880 aa7.19□□□□□ -1.26
RFC4-213ENST00000489028 EDEM1Q92611 657 aa7.19□□□□□ -1.26
RFC4-213ENST00000489028 NUDT16Q96DE0 195 aaKnown RBP7.19□□□□□ -1.26
RFC4-213ENST00000489028 MKL2Q9ULH7 1088 aa7.19□□□□□ -1.26
RFC4-213ENST00000489028 M0R082 166 aa7.18□□□□□ -1.26
RFC4-213ENST00000489028 COL8A1P27658 744 aa7.18□□□□□ -1.26
RFC4-213ENST00000489028 ECM1Q16610 540 aa7.18□□□□□ -1.26
RFC4-213ENST00000489028 NOM1Q5C9Z4 860 aaKnown RBP7.18□□□□□ -1.26
RFC4-213ENST00000489028 MICALL1Q8N3F8 863 aa7.18□□□□□ -1.26
RFC4-213ENST00000489028 ZNF417Q8TAU3 575 aa7.18□□□□□ -1.26
RFC4-213ENST00000489028 TRPM4Q8TD43 1214 aa7.18□□□□□ -1.26
RFC4-213ENST00000489028 TRIM11Q96F44 468 aa7.18□□□□□ -1.26
RFC4-213ENST00000489028 ZNF587Q96SQ5 575 aaPredicted RBP7.18□□□□□ -1.26
RFC4-213ENST00000489028 A6NHS1 94 aa7.17□□□□□ -1.26
RFC4-213ENST00000489028 PHF20L1A8MW92 1017 aa7.17□□□□□ -1.26
RFC4-213ENST00000489028 PDGFAP04085 211 aa7.17□□□□□ -1.26
RFC4-213ENST00000489028 ARID4AP29374 1257 aaPredicted RBP7.17□□□□□ -1.26
RFC4-213ENST00000489028 FKBP4Q02790 459 aaKnown RBP eCLIP7.17□□□□□ -1.26
RFC4-213ENST00000489028 PLAURQ03405 335 aa7.17□□□□□ -1.26
RFC4-213ENST00000489028 DNM1Q05193 864 aaKnown RBP7.17□□□□□ -1.26
RFC4-213ENST00000489028 KANK3Q6NY19 840 aa7.17□□□□□ -1.26
RFC4-213ENST00000489028 NLRP13Q86W25 1043 aa7.17□□□□□ -1.26
RFC4-213ENST00000489028 GGNBP2Q9H3C7 697 aa7.17□□□□□ -1.26
RFC4-213ENST00000489028 FAM13BQ9NYF5 915 aa7.17□□□□□ -1.26
RFC4-213ENST00000489028 TLR7Q9NYK1 1049 aaKnown RBP7.17□□□□□ -1.26
RFC4-213ENST00000489028 MTMR7Q9Y216 660 aa7.17□□□□□ -1.26
RFC4-213ENST00000489028 GNB5O14775 395 aa7.16□□□□□ -1.26
RFC4-213ENST00000489028 FZD6O60353 706 aa7.16□□□□□ -1.26
RFC4-213ENST00000489028 ICMTO60725 284 aa7.16□□□□□ -1.26
RFC4-213ENST00000489028 GPLD1P80108 840 aa7.16□□□□□ -1.26
RFC4-213ENST00000489028 SF3B2Q13435 895 aaKnown RBP7.16□□□□□ -1.26
RFC4-213ENST00000489028 HFE2Q6ZVN8 426 aa7.16□□□□□ -1.26
RFC4-213ENST00000489028 NUDT8Q8WV74 236 aa7.16□□□□□ -1.26
RFC4-213ENST00000489028 EGFL7Q9UHF1 273 aa7.16□□□□□ -1.26
RFC4-213ENST00000489028 H3BRB1 525 aa7.15□□□□□ -1.26
RFC4-213ENST00000489028 FAM13AO94988 1023 aa7.15□□□□□ -1.26
RFC4-213ENST00000489028 GDF11O95390 407 aa7.15□□□□□ -1.26
RFC4-213ENST00000489028 CPB1P15086 417 aa7.15□□□□□ -1.26
RFC4-213ENST00000489028 NRLP54845 237 aa7.15□□□□□ -1.26
RFC4-213ENST00000489028 PERM1Q5SV97 790 aa7.15□□□□□ -1.26
RFC4-213ENST00000489028 COL13A1Q5TAT6 717 aaPredicted RBP7.15□□□□□ -1.26
RFC4-213ENST00000489028 PSAPL1Q6NUJ1 521 aa7.15□□□□□ -1.26
RFC4-213ENST00000489028 FAM35AQ86V20 835 aa7.15□□□□□ -1.26
RFC4-213ENST00000489028 TMEM151AQ8N4L1 468 aa7.15□□□□□ -1.26
RFC4-213ENST00000489028 LPIN3Q9BQK8 851 aa7.15□□□□□ -1.26
RFC4-213ENST00000489028 TUT1Q9H6E5 874 aaKnown RBP7.15□□□□□ -1.26
RFC4-213ENST00000489028 PRDM6Q9NQX0 595 aa7.15□□□□□ -1.26
RFC4-213ENST00000489028 CCDC87Q9NVE4 849 aa7.15□□□□□ -1.26
RFC4-213ENST00000489028 TMEM63CQ9P1W3 806 aa7.15□□□□□ -1.26
RFC4-213ENST00000489028 POLIQ9UNA4 740 aa7.15□□□□□ -1.26
RFC4-213ENST00000489028 J3QW42 95 aa7.14□□□□□ -1.27
RFC4-213ENST00000489028 CYP2E1P05181 493 aaPredicted RBP7.14□□□□□ -1.27
RFC4-213ENST00000489028 HOXD8P13378 290 aaPredicted RBP7.14□□□□□ -1.27
RFC4-213ENST00000489028 NID1P14543 1247 aa7.14□□□□□ -1.27
RFC4-213ENST00000489028 MZF1P28698 734 aaPredicted RBP7.14□□□□□ -1.27
RFC4-213ENST00000489028 DCAF5Q96JK2 942 aa7.14□□□□□ -1.27
RFC4-213ENST00000489028 NSUN5Q96P11 429 aaKnown RBP7.14□□□□□ -1.27
RFC4-213ENST00000489028 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP7.14□□□□□ -1.27
RFC4-213ENST00000489028 ITGB2P05107 769 aa7.13□□□□□ -1.27
RFC4-213ENST00000489028 PSAPP07602 524 aa7.13□□□□□ -1.27
RFC4-213ENST00000489028 PDE4CQ08493 712 aa7.13□□□□□ -1.27
RFC4-213ENST00000489028 GRIK5Q16478 980 aa7.13□□□□□ -1.27
RFC4-213ENST00000489028 ALKBH2Q6NS38 261 aa7.13□□□□□ -1.27
RFC4-213ENST00000489028 OR13H1Q8NG92 308 aa7.13□□□□□ -1.27
RFC4-213ENST00000489028 PLVAPQ9BX97 442 aa7.13□□□□□ -1.27
RFC4-213ENST00000489028 ELP3Q9H9T3 547 aa7.13□□□□□ -1.27
RFC4-213ENST00000489028 JPH1Q9HDC5 661 aaPredicted RBP7.13□□□□□ -1.27
RFC4-213ENST00000489028 CNTN3Q9P232 1028 aa7.13□□□□□ -1.27
RFC4-213ENST00000489028 FNDC3AQ9Y2H6 1198 aaKnown RBP7.13□□□□□ -1.27
RFC4-213ENST00000489028 BRD1O95696 1058 aa7.12□□□□□ -1.27
RFC4-213ENST00000489028 SOX18P35713 384 aa7.12□□□□□ -1.27
RFC4-213ENST00000489028 AFF1P51825 1210 aaKnown RBP7.12□□□□□ -1.27
RFC4-213ENST00000489028 ARHGAP4P98171 946 aa7.12□□□□□ -1.27
RFC4-213ENST00000489028 PDE12Q6L8Q7 609 aaKnown RBP7.12□□□□□ -1.27
RFC4-213ENST00000489028 KCTD17Q8N5Z5 321 aa7.12□□□□□ -1.27
RFC4-213ENST00000489028 LOC102724428A0A0B4J2F2 783 aa7.11□□□□□ -1.27
RFC4-213ENST00000489028 KRBA1A5PL33 1030 aa7.11□□□□□ -1.27
RFC4-213ENST00000489028 LILRB5O75023 590 aa7.11□□□□□ -1.27
RFC4-213ENST00000489028 EIF2AK2P19525 551 aaKnown RBP7.11□□□□□ -1.27
RFC4-213ENST00000489028 SIK1P57059 783 aa7.11□□□□□ -1.27
RFC4-213ENST00000489028 AAMPQ13685 434 aa7.11□□□□□ -1.27
RFC4-213ENST00000489028 PCSK7Q16549 785 aa7.11□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms