RNA–Protein interactions for RNA: ENST00000488846.1

SMKR1-202, Transcript of small lysine rich protein 1, humanhuman

TSL 3

Gene SMKR1, Length 424 nt, Biotype processed transcript.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMKR1-202ENST00000488846 MYH3P11055 1940 aa11.22□□□□□ -0.61
SMKR1-202ENST00000488846 CCT4P50991 539 aaKnown RBP11.22□□□□□ -0.61
SMKR1-202ENST00000488846 CTSWP56202 376 aa11.22□□□□□ -0.61
SMKR1-202ENST00000488846 TTLL11Q8NHH1 800 aa11.22□□□□□ -0.61
SMKR1-202ENST00000488846 JARID2Q92833 1246 aaPredicted RBP11.22□□□□□ -0.61
SMKR1-202ENST00000488846 RPGRQ92834 1020 aaKnown RBP11.22□□□□□ -0.61
SMKR1-202ENST00000488846 USP44Q9H0E7 712 aa11.22□□□□□ -0.61
SMKR1-202ENST00000488846 BBOX1O75936 387 aa11.21□□□□□ -0.61
SMKR1-202ENST00000488846 FOXO4P98177 505 aa11.21□□□□□ -0.61
SMKR1-202ENST00000488846 CCDC152Q4G0S7 254 aa11.21□□□□□ -0.61
SMKR1-202ENST00000488846 SOGA3Q5TF21 947 aa11.21□□□□□ -0.61
SMKR1-202ENST00000488846 ZKSCAN2Q63HK3 967 aa11.21□□□□□ -0.61
SMKR1-202ENST00000488846 KAZALD1Q96I82 304 aa11.21□□□□□ -0.61
SMKR1-202ENST00000488846 RCAN3Q9UKA8 241 aa11.21□□□□□ -0.61
SMKR1-202ENST00000488846 WWC3Q9ULE0 1092 aa11.21□□□□□ -0.61
SMKR1-202ENST00000488846 FER1L6Q2WGJ9 1857 aa11.21□□□□□ -0.62
SMKR1-202ENST00000488846 COL4A1P02462 1669 aa11.2□□□□□ -0.62
SMKR1-202ENST00000488846 LTBP3Q9NS15 1303 aa11.2□□□□□ -0.62
SMKR1-202ENST00000488846 NBPF7P0C2Y1 421 aaPredicted RBP11.2□□□□□ -0.62
SMKR1-202ENST00000488846 GRAPQ13588 217 aa11.2□□□□□ -0.62
SMKR1-202ENST00000488846 GRIPAP1Q4V328 841 aa11.2□□□□□ -0.62
SMKR1-202ENST00000488846 CC2D2BQ6DHV5 1058 aa11.2□□□□□ -0.62
SMKR1-202ENST00000488846 DDX46Q7L014 1031 aaKnown RBP11.2□□□□□ -0.62
SMKR1-202ENST00000488846 TMC4Q7Z404 712 aa11.2□□□□□ -0.62
SMKR1-202ENST00000488846 PELP1Q8IZL8 1130 aaKnown RBP11.2□□□□□ -0.62
SMKR1-202ENST00000488846 GRAPLQ8TC17 118 aaPredicted RBP11.2□□□□□ -0.62
SMKR1-202ENST00000488846 YTHDC1Q96MU7 727 aaKnown RBP11.2□□□□□ -0.62
SMKR1-202ENST00000488846 C9orf78Q9NZ63 289 aaPredicted RBP11.2□□□□□ -0.62
SMKR1-202ENST00000488846 TNNQ9UQP3 1299 aa11.2□□□□□ -0.62
SMKR1-202ENST00000488846 CHD4Q14839 1912 aa11.19□□□□□ -0.62
SMKR1-202ENST00000488846 CACNA1SQ13698 1873 aa11.19□□□□□ -0.62
SMKR1-202ENST00000488846 LRRC37AA6NMS7 1700 aa11.19□□□□□ -0.62
SMKR1-202ENST00000488846 NFKBIEO00221 500 aa11.19□□□□□ -0.62
SMKR1-202ENST00000488846 C21orf2O43822 256 aa11.19□□□□□ -0.62
SMKR1-202ENST00000488846 RABL6Q3YEC7 729 aaPredicted RBP11.19□□□□□ -0.62
SMKR1-202ENST00000488846 FRAT1Q92837 279 aaPredicted RBP11.19□□□□□ -0.62
SMKR1-202ENST00000488846 ATP6V0A2Q9Y487 856 aa11.19□□□□□ -0.62
SMKR1-202ENST00000488846 TAF1P21675 1872 aa11.19□□□□□ -0.62
SMKR1-202ENST00000488846 PPEF1O14829 653 aaPredicted RBP11.18□□□□□ -0.62
SMKR1-202ENST00000488846 RLBP1P12271 317 aa11.18□□□□□ -0.62
SMKR1-202ENST00000488846 RPS8P62241 208 aaKnown RBP11.18□□□□□ -0.62
SMKR1-202ENST00000488846 CCDC93Q567U6 631 aa11.18□□□□□ -0.62
SMKR1-202ENST00000488846 EPHA10Q5JZY3 1008 aa11.18□□□□□ -0.62
SMKR1-202ENST00000488846 SP8Q8IXZ3 490 aa11.18□□□□□ -0.62
SMKR1-202ENST00000488846 RTKN2Q8IZC4 609 aa11.18□□□□□ -0.62
SMKR1-202ENST00000488846 CELF1Q92879 486 aaKnown RBP11.18□□□□□ -0.62
SMKR1-202ENST00000488846 SUCLG2Q96I99 432 aa11.18□□□□□ -0.62
SMKR1-202ENST00000488846 PSMD1Q99460 953 aa11.18□□□□□ -0.62
SMKR1-202ENST00000488846 GREM2Q9H772 168 aa11.18□□□□□ -0.62
SMKR1-202ENST00000488846 SEC31BQ9NQW1 1179 aa11.18□□□□□ -0.62
SMKR1-202ENST00000488846 SBF1O95248 1867 aa11.17□□□□□ -0.62
SMKR1-202ENST00000488846 PRELPP51888 382 aa11.17□□□□□ -0.62
SMKR1-202ENST00000488846 OLFM4Q6UX06 510 aa11.17□□□□□ -0.62
SMKR1-202ENST00000488846 ARHGAP27Q6ZUM4 889 aa11.17□□□□□ -0.62
SMKR1-202ENST00000488846 DZIP1LQ8IYY4 767 aaKnown RBP11.17□□□□□ -0.62
SMKR1-202ENST00000488846 RTFDC1Q9BY42 306 aaPredicted RBP11.17□□□□□ -0.62
SMKR1-202ENST00000488846 LTBP1Q14766 1721 aa11.17□□□□□ -0.62
SMKR1-202ENST00000488846 ITGA6P23229 1130 aa11.16□□□□□ -0.62
SMKR1-202ENST00000488846 FKBP4Q02790 459 aaKnown RBP eCLIP11.16□□□□□ -0.62
SMKR1-202ENST00000488846 LMBR1LQ6UX01 489 aa11.16□□□□□ -0.62
SMKR1-202ENST00000488846 SLC51AQ86UW1 340 aa11.16□□□□□ -0.62
SMKR1-202ENST00000488846 TMEM57Q8N5G2 664 aa11.16□□□□□ -0.62
SMKR1-202ENST00000488846 ANKRD44Q8N8A2 993 aa11.16□□□□□ -0.62
SMKR1-202ENST00000488846 CLUAP1Q96AJ1 413 aa11.16□□□□□ -0.62
SMKR1-202ENST00000488846 CDC5LQ99459 802 aaKnown RBP11.16□□□□□ -0.62
SMKR1-202ENST00000488846 MEIS3Q99687 375 aa11.16□□□□□ -0.62
SMKR1-202ENST00000488846 BICC1Q9H694 974 aaKnown RBP11.16□□□□□ -0.62
SMKR1-202ENST00000488846 BSDC1Q9NW68 430 aaPredicted RBP11.16□□□□□ -0.62
SMKR1-202ENST00000488846 GNAI3P08754 354 aa11.15□□□□□ -0.62
SMKR1-202ENST00000488846 MS4A1P11836 297 aa11.15□□□□□ -0.62
SMKR1-202ENST00000488846 LMNB1P20700 586 aa11.15□□□□□ -0.62
SMKR1-202ENST00000488846 RASSF7Q02833 373 aa11.15□□□□□ -0.62
SMKR1-202ENST00000488846 PDE3AQ14432 1141 aa11.15□□□□□ -0.62
SMKR1-202ENST00000488846 FAM161AQ3B820 660 aa11.15□□□□□ -0.62
SMKR1-202ENST00000488846 VPS33BQ9H267 617 aa11.15□□□□□ -0.62
SMKR1-202ENST00000488846 TAOK3Q9H2K8 898 aa11.15□□□□□ -0.62
SMKR1-202ENST00000488846 PODXL2Q9NZ53 605 aa11.15□□□□□ -0.62
SMKR1-202ENST00000488846 HDAC5Q9UQL6 1122 aa11.15□□□□□ -0.62
SMKR1-202ENST00000488846 DUOX1Q9NRD9 1551 aa11.15□□□□□ -0.62
SMKR1-202ENST00000488846 ZC3H4Q9UPT8 1303 aaKnown RBP11.14□□□□□ -0.63
SMKR1-202ENST00000488846 ZBTB7BO15156 539 aaPredicted RBP11.14□□□□□ -0.63
SMKR1-202ENST00000488846 UBTFL1P0CB47 393 aaPredicted RBP11.14□□□□□ -0.63
SMKR1-202ENST00000488846 ANKRD18AQ8IVF6 992 aa11.14□□□□□ -0.63
SMKR1-202ENST00000488846 FTSJ3Q8IY81 847 aaKnown RBP11.14□□□□□ -0.63
SMKR1-202ENST00000488846 CCDC85AQ96PX6 553 aaPredicted RBP11.14□□□□□ -0.63
SMKR1-202ENST00000488846 ZNF219Q9P2Y4 722 aaPredicted RBP11.14□□□□□ -0.63
SMKR1-202ENST00000488846 DICER1Q9UPY3 1922 aaKnown RBP11.13□□□□□ -0.63
SMKR1-202ENST00000488846 ANKRD18BA2A2Z9 1011 aa11.13□□□□□ -0.63
SMKR1-202ENST00000488846 IFIT5Q13325 482 aaKnown RBP11.13□□□□□ -0.63
SMKR1-202ENST00000488846 MTX1Q13505 466 aa11.13□□□□□ -0.63
SMKR1-202ENST00000488846 MINPP1Q9UNW1 487 aa11.13□□□□□ -0.63
SMKR1-202ENST00000488846 PLIN1O60240 522 aa11.12□□□□□ -0.63
SMKR1-202ENST00000488846 IGHMBP2P38935 993 aaKnown RBP11.12□□□□□ -0.63
SMKR1-202ENST00000488846 RFX5P48382 616 aaPredicted RBP11.12□□□□□ -0.63
SMKR1-202ENST00000488846 CCDC57Q2TAC2 916 aa11.12□□□□□ -0.63
SMKR1-202ENST00000488846 C9orf131Q5VYM1 1079 aa11.12□□□□□ -0.63
SMKR1-202ENST00000488846 MPNDQ8N594 471 aa11.12□□□□□ -0.63
SMKR1-202ENST00000488846 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.12□□□□□ -0.63
SMKR1-202ENST00000488846 PANK1Q8TE04 598 aa11.12□□□□□ -0.63
SMKR1-202ENST00000488846 TMX4Q9H1E5 349 aaPredicted RBP11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms