RNA–Protein interactions for RNA: ENST00000488737.6

ABCB1-207, Transcript of ATP binding cassette subfamily B member 1, humanhuman

TSL 1 (best)

Gene ABCB1, Length 1,864 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCB1-207ENST00000488737 PCDH11YQ9BZA8 1340 aa16.98■□□□□ 0.31
ABCB1-207ENST00000488737 MSNP26038 577 aaKnown RBP16.98■□□□□ 0.31
ABCB1-207ENST00000488737 KRT32Q14532 448 aa16.98■□□□□ 0.31
ABCB1-207ENST00000488737 USPL1Q5W0Q7 1092 aa16.98■□□□□ 0.31
ABCB1-207ENST00000488737 BLOC1S2Q6QNY1 142 aa16.98■□□□□ 0.31
ABCB1-207ENST00000488737 LARP6Q9BRS8 491 aaKnown RBP16.98■□□□□ 0.31
ABCB1-207ENST00000488737 TJP1Q07157 1748 aa16.98■□□□□ 0.31
ABCB1-207ENST00000488737 A0A087WZG4 1122 aa16.97■□□□□ 0.31
ABCB1-207ENST00000488737 RPS6KB1P23443 525 aa16.97■□□□□ 0.31
ABCB1-207ENST00000488737 ST3GAL1Q11201 340 aa16.97■□□□□ 0.31
ABCB1-207ENST00000488737 TFCP2Q12800 502 aa16.97■□□□□ 0.31
ABCB1-207ENST00000488737 ROBO1Q9Y6N7 1651 aa16.97■□□□□ 0.31
ABCB1-207ENST00000488737 TAF5LO75529 589 aa16.97■□□□□ 0.31
ABCB1-207ENST00000488737 UVSSAQ2YD98 709 aa16.97■□□□□ 0.31
ABCB1-207ENST00000488737 FOXD4L6Q3SYB3 417 aaPredicted RBP16.97■□□□□ 0.31
ABCB1-207ENST00000488737 FOXD4L3Q6VB84 417 aaPredicted RBP16.97■□□□□ 0.31
ABCB1-207ENST00000488737 TPCN1Q9ULQ1 816 aa16.97■□□□□ 0.31
ABCB1-207ENST00000488737 NOL7Q9UMY1 257 aaKnown RBP16.97■□□□□ 0.31
ABCB1-207ENST00000488737 WDR17Q8IZU2 1322 aa16.96■□□□□ 0.31
ABCB1-207ENST00000488737 ERVV-2B6SEH9 535 aa16.96■□□□□ 0.31
ABCB1-207ENST00000488737 PDCP20941 246 aa16.96■□□□□ 0.31
ABCB1-207ENST00000488737 MCM5P33992 734 aa16.96■□□□□ 0.31
ABCB1-207ENST00000488737 NAP1L5Q96NT1 182 aaPredicted RBP16.96■□□□□ 0.31
ABCB1-207ENST00000488737 HAUS7Q99871 368 aa16.96■□□□□ 0.31
ABCB1-207ENST00000488737 SLAIN2Q9P270 581 aa16.96■□□□□ 0.31
ABCB1-207ENST00000488737 KCPQ6ZWJ8 1503 aa16.95■□□□□ 0.3
ABCB1-207ENST00000488737 H7C1W4 665 aa16.95■□□□□ 0.3
ABCB1-207ENST00000488737 ZNF589Q86UQ0 364 aaPredicted RBP16.95■□□□□ 0.3
ABCB1-207ENST00000488737 GPR108Q9NPR9 543 aa16.95■□□□□ 0.3
ABCB1-207ENST00000488737 SPEF2Q9C093 1822 aa16.95■□□□□ 0.3
ABCB1-207ENST00000488737 CCDC39Q9UFE4 941 aa16.95■□□□□ 0.3
ABCB1-207ENST00000488737 NHSL1Q5SYE7 1610 aa16.94■□□□□ 0.3
ABCB1-207ENST00000488737 ATP5J2-PTCD1G3V325 749 aa16.94■□□□□ 0.3
ABCB1-207ENST00000488737 PTCD1O75127 700 aaKnown RBP16.94■□□□□ 0.3
ABCB1-207ENST00000488737 PIP4K2AP48426 406 aaPredicted RBP16.94■□□□□ 0.3
ABCB1-207ENST00000488737 U3KPZ7 1027 aaPredicted RBP16.94■□□□□ 0.3
ABCB1-207ENST00000488737 SHANK3Q9BYB0 1731 aa16.94■□□□□ 0.3
ABCB1-207ENST00000488737 NBPF26B4DH59 902 aa16.93■□□□□ 0.3
ABCB1-207ENST00000488737 FOXO4P98177 505 aa16.93■□□□□ 0.3
ABCB1-207ENST00000488737 NKX1-1Q15270 411 aaPredicted RBP16.93■□□□□ 0.3
ABCB1-207ENST00000488737 NBPF14Q5TI25 921 aa16.93■□□□□ 0.3
ABCB1-207ENST00000488737 NBPF10Q6P3W6 841 aaKnown RBP16.93■□□□□ 0.3
ABCB1-207ENST00000488737 BRINP3Q76B58 766 aa16.93■□□□□ 0.3
ABCB1-207ENST00000488737 NBPF15Q8N660 670 aa16.93■□□□□ 0.3
ABCB1-207ENST00000488737 ZCRB1Q8TBF4 217 aaKnown RBP16.93■□□□□ 0.3
ABCB1-207ENST00000488737 CWC25Q9NXE8 425 aaPredicted RBP16.93■□□□□ 0.3
ABCB1-207ENST00000488737 PALLDQ8WX93 1383 aa16.93■□□□□ 0.3
ABCB1-207ENST00000488737 ZNF609O15014 1411 aa16.93■□□□□ 0.3
ABCB1-207ENST00000488737 ZNF500O60304 480 aaPredicted RBP16.93■□□□□ 0.3
ABCB1-207ENST00000488737 TOB2Q14106 344 aaPredicted RBP16.93■□□□□ 0.3
ABCB1-207ENST00000488737 LARP1BQ659C4 914 aaKnown RBP16.93■□□□□ 0.3
ABCB1-207ENST00000488737 LMBR1LQ6UX01 489 aa16.93■□□□□ 0.3
ABCB1-207ENST00000488737 NECAB1Q8N987 351 aa16.93■□□□□ 0.3
ABCB1-207ENST00000488737 DBNDD2Q9BQY9 259 aa16.93■□□□□ 0.3
ABCB1-207ENST00000488737 ABCA3Q99758 1704 aa16.92■□□□□ 0.3
ABCB1-207ENST00000488737 SH3TC1Q8TE82 1336 aa16.92■□□□□ 0.3
ABCB1-207ENST00000488737 TNS2Q63HR2 1409 aa16.92■□□□□ 0.3
ABCB1-207ENST00000488737 FIBPO43427 364 aa16.92■□□□□ 0.3
ABCB1-207ENST00000488737 MCMDC2Q4G0Z9 681 aa16.92■□□□□ 0.3
ABCB1-207ENST00000488737 JARID2Q92833 1246 aaPredicted RBP16.92■□□□□ 0.3
ABCB1-207ENST00000488737 COL5A2P05997 1499 aaPredicted RBP16.92■□□□□ 0.3
ABCB1-207ENST00000488737 VPS37CA5D8V6 355 aaPredicted RBP16.91■□□□□ 0.3
ABCB1-207ENST00000488737 DNM1Q05193 864 aaKnown RBP16.91■□□□□ 0.3
ABCB1-207ENST00000488737 KBTBD3Q8NAB2 608 aa16.91■□□□□ 0.3
ABCB1-207ENST00000488737 CCDC191Q8NCU4 936 aa16.91■□□□□ 0.3
ABCB1-207ENST00000488737 RNF214Q8ND24 703 aa16.91■□□□□ 0.3
ABCB1-207ENST00000488737 DDX54Q8TDD1 881 aaKnown RBP16.91■□□□□ 0.3
ABCB1-207ENST00000488737 EDC3Q96F86 508 aaKnown RBP16.91■□□□□ 0.3
ABCB1-207ENST00000488737 ZKSCAN5Q9Y2L8 839 aa16.91■□□□□ 0.3
ABCB1-207ENST00000488737 ELP1O95163 1332 aa16.91■□□□□ 0.3
ABCB1-207ENST00000488737 OFD1O75665 1012 aa16.9■□□□□ 0.3
ABCB1-207ENST00000488737 IL15P40933 162 aaPredicted RBP16.9■□□□□ 0.3
ABCB1-207ENST00000488737 PDZRN4Q6ZMN7 1036 aaPredicted RBP16.9■□□□□ 0.3
ABCB1-207ENST00000488737 ATG3Q9NT62 314 aa16.9■□□□□ 0.3
ABCB1-207ENST00000488737 LAMA4Q16363 1823 aa16.9■□□□□ 0.3
ABCB1-207ENST00000488737 KRT85P78386 507 aa16.9■□□□□ 0.3
ABCB1-207ENST00000488737 ATG9AQ7Z3C6 839 aa16.9■□□□□ 0.3
ABCB1-207ENST00000488737 NEK1Q96PY6 1258 aa16.9■□□□□ 0.3
ABCB1-207ENST00000488737 PRDM11Q9NQV5 511 aa16.9■□□□□ 0.3
ABCB1-207ENST00000488737 TOM1L2Q6ZVM7 507 aa16.89■□□□□ 0.29
ABCB1-207ENST00000488737 DNAJC2Q99543 621 aaKnown RBP16.89■□□□□ 0.29
ABCB1-207ENST00000488737 HELLSQ9NRZ9 838 aa16.89■□□□□ 0.29
ABCB1-207ENST00000488737 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.89■□□□□ 0.29
ABCB1-207ENST00000488737 TAF6LQ9Y6J9 622 aa16.89■□□□□ 0.29
ABCB1-207ENST00000488737 CIAO1O76071 339 aa16.88■□□□□ 0.29
ABCB1-207ENST00000488737 TTLL7Q6ZT98 887 aa16.88■□□□□ 0.29
ABCB1-207ENST00000488737 CARD10Q9BWT7 1032 aa16.88■□□□□ 0.29
ABCB1-207ENST00000488737 SOS2Q07890 1332 aaPredicted RBP16.88■□□□□ 0.29
ABCB1-207ENST00000488737 PHLPP1O60346 1717 aa16.88■□□□□ 0.29
ABCB1-207ENST00000488737 HMGB1P09429 215 aaKnown RBP16.88■□□□□ 0.29
ABCB1-207ENST00000488737 COL9A3Q14050 684 aaPredicted RBP16.88■□□□□ 0.29
ABCB1-207ENST00000488737 GTF3C6Q969F1 213 aa16.88■□□□□ 0.29
ABCB1-207ENST00000488737 IL2RBP14784 551 aa16.87■□□□□ 0.29
ABCB1-207ENST00000488737 TERF1P54274 439 aa16.87■□□□□ 0.29
ABCB1-207ENST00000488737 CDC37L1Q7L3B6 337 aa16.87■□□□□ 0.29
ABCB1-207ENST00000488737 PPIL4Q8WUA2 492 aaKnown RBP eCLIP16.87■□□□□ 0.29
ABCB1-207ENST00000488737 FUCA2Q9BTY2 467 aa16.87■□□□□ 0.29
ABCB1-207ENST00000488737 DSCC1Q9BVC3 393 aa16.87■□□□□ 0.29
ABCB1-207ENST00000488737 EYA2O00167 538 aa16.86■□□□□ 0.29
ABCB1-207ENST00000488737 TPM2P07951 284 aa16.86■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms