RNA–Protein interactions for RNA: ENST00000488702.1

TRAF3IP3-216, Transcript of TRAF3 interacting protein 3, humanhuman

TSL 5

Gene TRAF3IP3, Length 566 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP3-216ENST00000488702 USP20Q9Y2K6 914 aa8.36□□□□□ -1.07
TRAF3IP3-216ENST00000488702 SASH3O75995 380 aa8.35□□□□□ -1.07
TRAF3IP3-216ENST00000488702 NID1P14543 1247 aa8.35□□□□□ -1.07
TRAF3IP3-216ENST00000488702 TBC1D8BQ0IIM8 1120 aa8.35□□□□□ -1.07
TRAF3IP3-216ENST00000488702 RGL4Q8IZJ4 473 aa8.35□□□□□ -1.07
TRAF3IP3-216ENST00000488702 KCNMB2Q9Y691 235 aa8.35□□□□□ -1.07
TRAF3IP3-216ENST00000488702 TMEM88BA6NKF7 163 aa8.34□□□□□ -1.07
TRAF3IP3-216ENST00000488702 DHX32Q7L7V1 743 aaKnown RBP8.34□□□□□ -1.07
TRAF3IP3-216ENST00000488702 KRT25Q7Z3Z0 450 aa8.34□□□□□ -1.07
TRAF3IP3-216ENST00000488702 CMTR1Q8N1G2 835 aaKnown RBP8.34□□□□□ -1.07
TRAF3IP3-216ENST00000488702 TRPM4Q8TD43 1214 aa8.34□□□□□ -1.07
TRAF3IP3-216ENST00000488702 NAGPAQ9UK23 515 aa8.34□□□□□ -1.07
TRAF3IP3-216ENST00000488702 ZBTB42B2RXF5 422 aa8.33□□□□□ -1.08
TRAF3IP3-216ENST00000488702 LILRB5O75023 590 aa8.33□□□□□ -1.08
TRAF3IP3-216ENST00000488702 XYLBO75191 536 aa8.33□□□□□ -1.08
TRAF3IP3-216ENST00000488702 SPATA31C1P0DKV0 1188 aa8.33□□□□□ -1.08
TRAF3IP3-216ENST00000488702 RARAP10276 462 aa8.33□□□□□ -1.08
TRAF3IP3-216ENST00000488702 PCSK7Q16549 785 aa8.33□□□□□ -1.08
TRAF3IP3-216ENST00000488702 SPDYE3A6NKU9 549 aa8.32□□□□□ -1.08
TRAF3IP3-216ENST00000488702 C1QTNF9BB2RNN3 333 aa8.32□□□□□ -1.08
TRAF3IP3-216ENST00000488702 CD163Q86VB7 1156 aa8.32□□□□□ -1.08
TRAF3IP3-216ENST00000488702 STIM2Q9P246 746 aa8.32□□□□□ -1.08
TRAF3IP3-216ENST00000488702 SEPT3Q9UH03 358 aa8.32□□□□□ -1.08
TRAF3IP3-216ENST00000488702 CHRNA4P43681 627 aa8.31□□□□□ -1.08
TRAF3IP3-216ENST00000488702 GPLD1P80108 840 aa8.31□□□□□ -1.08
TRAF3IP3-216ENST00000488702 PSAPL1Q6NUJ1 521 aa8.31□□□□□ -1.08
TRAF3IP3-216ENST00000488702 FAM35AQ86V20 835 aa8.31□□□□□ -1.08
TRAF3IP3-216ENST00000488702 ZBTB39O15060 712 aa8.3□□□□□ -1.08
TRAF3IP3-216ENST00000488702 AFF1P51825 1210 aaKnown RBP8.3□□□□□ -1.08
TRAF3IP3-216ENST00000488702 TRIP4Q15650 581 aaPredicted RBP8.3□□□□□ -1.08
TRAF3IP3-216ENST00000488702 ILDR2Q71H61 639 aa8.3□□□□□ -1.08
TRAF3IP3-216ENST00000488702 NUDT8Q8WV74 236 aa8.3□□□□□ -1.08
TRAF3IP3-216ENST00000488702 JPH1Q9HDC5 661 aaPredicted RBP8.3□□□□□ -1.08
TRAF3IP3-216ENST00000488702 TLR7Q9NYK1 1049 aaKnown RBP8.3□□□□□ -1.08
TRAF3IP3-216ENST00000488702 SSFA2P28290 1259 aa8.29□□□□□ -1.08
TRAF3IP3-216ENST00000488702 ZAP70P43403 619 aa8.29□□□□□ -1.08
TRAF3IP3-216ENST00000488702 NRLP54845 237 aa8.29□□□□□ -1.08
TRAF3IP3-216ENST00000488702 PRRT3Q5FWE3 981 aa8.29□□□□□ -1.08
TRAF3IP3-216ENST00000488702 LPIN3Q9BQK8 851 aa8.29□□□□□ -1.08
TRAF3IP3-216ENST00000488702 FAM13BQ9NYF5 915 aa8.29□□□□□ -1.08
TRAF3IP3-216ENST00000488702 FRRS1LQ9P0K9 344 aa8.29□□□□□ -1.08
TRAF3IP3-216ENST00000488702 MMP20O60882 483 aa8.28□□□□□ -1.08
TRAF3IP3-216ENST00000488702 RGS9O75916 674 aaPredicted RBP8.28□□□□□ -1.08
TRAF3IP3-216ENST00000488702 CPB1P15086 417 aa8.28□□□□□ -1.08
TRAF3IP3-216ENST00000488702 ARID4AP29374 1257 aaPredicted RBP8.28□□□□□ -1.08
TRAF3IP3-216ENST00000488702 SCNN1AP37088 669 aa8.28□□□□□ -1.08
TRAF3IP3-216ENST00000488702 PERM1Q5SV97 790 aa8.28□□□□□ -1.08
TRAF3IP3-216ENST00000488702 ABTB2Q8N961 1025 aa8.28□□□□□ -1.08
TRAF3IP3-216ENST00000488702 PIK3R5Q8WYR1 880 aa8.28□□□□□ -1.08
TRAF3IP3-216ENST00000488702 FAM229AH3BQW9 127 aa8.27□□□□□ -1.09
TRAF3IP3-216ENST00000488702 HOXD8P13378 290 aaPredicted RBP8.27□□□□□ -1.09
TRAF3IP3-216ENST00000488702 MLLT1Q03111 559 aaPredicted RBP8.27□□□□□ -1.09
TRAF3IP3-216ENST00000488702 TRIM28Q13263 835 aaKnown RBP8.27□□□□□ -1.09
TRAF3IP3-216ENST00000488702 SUZ12Q15022 739 aaKnown RBP8.27□□□□□ -1.09
TRAF3IP3-216ENST00000488702 GRIK5Q16478 980 aa8.27□□□□□ -1.09
TRAF3IP3-216ENST00000488702 ERICH6Q7L0X2 663 aa8.27□□□□□ -1.09
TRAF3IP3-216ENST00000488702 NLRP13Q86W25 1043 aa8.27□□□□□ -1.09
TRAF3IP3-216ENST00000488702 HELQQ8TDG4 1101 aa8.27□□□□□ -1.09
TRAF3IP3-216ENST00000488702 TTC9Q92623 222 aa8.27□□□□□ -1.09
TRAF3IP3-216ENST00000488702 SOX18P35713 384 aa8.26□□□□□ -1.09
TRAF3IP3-216ENST00000488702 PLAURQ03405 335 aa8.26□□□□□ -1.09
TRAF3IP3-216ENST00000488702 TRAPPC3LQ5T215 181 aa8.26□□□□□ -1.09
TRAF3IP3-216ENST00000488702 PHLDB3Q6NSJ2 640 aa8.26□□□□□ -1.09
TRAF3IP3-216ENST00000488702 A0A0A0MRY4 1105 aa8.25□□□□□ -1.09
TRAF3IP3-216ENST00000488702 UBAP1LF5GYI3 381 aa8.25□□□□□ -1.09
TRAF3IP3-216ENST00000488702 PSAPP07602 524 aa8.25□□□□□ -1.09
TRAF3IP3-216ENST00000488702 BAG6P46379 1132 aa8.25□□□□□ -1.09
TRAF3IP3-216ENST00000488702 ELMSAN1Q6PJG2 1045 aa8.25□□□□□ -1.09
TRAF3IP3-216ENST00000488702 HFE2Q6ZVN8 426 aa8.25□□□□□ -1.09
TRAF3IP3-216ENST00000488702 GPR152Q8TDT2 470 aa8.25□□□□□ -1.09
TRAF3IP3-216ENST00000488702 LOC102724428A0A0B4J2F2 783 aa8.24□□□□□ -1.09
TRAF3IP3-216ENST00000488702 CARNS1A5YM72 827 aa8.24□□□□□ -1.09
TRAF3IP3-216ENST00000488702 SIK1P57059 783 aa8.24□□□□□ -1.09
TRAF3IP3-216ENST00000488702 FNDC3AQ9Y2H6 1198 aaKnown RBP8.24□□□□□ -1.09
TRAF3IP3-216ENST00000488702 GRIK4Q16099 956 aa8.23□□□□□ -1.09
TRAF3IP3-216ENST00000488702 MSL1Q68DK7 614 aa8.23□□□□□ -1.09
TRAF3IP3-216ENST00000488702 ATCAYQ86WG3 371 aa8.23□□□□□ -1.09
TRAF3IP3-216ENST00000488702 GTF3C2Q8WUA4 911 aaPredicted RBP8.23□□□□□ -1.09
TRAF3IP3-216ENST00000488702 SMG9Q9H0W8 520 aaKnown RBP8.23□□□□□ -1.09
TRAF3IP3-216ENST00000488702 J3QW42 95 aa8.22□□□□□ -1.09
TRAF3IP3-216ENST00000488702 APBA3O96018 575 aa8.22□□□□□ -1.09
TRAF3IP3-216ENST00000488702 ELNP15502 786 aa8.22□□□□□ -1.09
TRAF3IP3-216ENST00000488702 EIF2AK2P19525 551 aaKnown RBP8.22□□□□□ -1.09
TRAF3IP3-216ENST00000488702 DMRTC2Q8IXT2 367 aaPredicted RBP8.22□□□□□ -1.09
TRAF3IP3-216ENST00000488702 OR13H1Q8NG92 308 aa8.22□□□□□ -1.09
TRAF3IP3-216ENST00000488702 NSUN5Q96P11 429 aaKnown RBP8.22□□□□□ -1.09
TRAF3IP3-216ENST00000488702 ADAM23O75077 832 aa8.21□□□□□ -1.1
TRAF3IP3-216ENST00000488702 RAC1P63000 192 aa8.21□□□□□ -1.1
TRAF3IP3-216ENST00000488702 FMR1NBQ8N0W7 255 aaPredicted RBP8.21□□□□□ -1.1
TRAF3IP3-216ENST00000488702 PLD4Q96BZ4 506 aa8.21□□□□□ -1.1
TRAF3IP3-216ENST00000488702 NUDT16Q96DE0 195 aaKnown RBP8.21□□□□□ -1.1
TRAF3IP3-216ENST00000488702 NACC1Q96RE7 527 aa8.21□□□□□ -1.1
TRAF3IP3-216ENST00000488702 SELPP16109 830 aa8.2□□□□□ -1.1
TRAF3IP3-216ENST00000488702 NPR3P17342 541 aa8.2□□□□□ -1.1
TRAF3IP3-216ENST00000488702 GATA4P43694 442 aa8.2□□□□□ -1.1
TRAF3IP3-216ENST00000488702 PDE12Q6L8Q7 609 aaKnown RBP8.2□□□□□ -1.1
TRAF3IP3-216ENST00000488702 DTWD1Q8N5C7 304 aa8.2□□□□□ -1.1
TRAF3IP3-216ENST00000488702 USTQ9Y2C2 406 aa8.2□□□□□ -1.1
TRAF3IP3-216ENST00000488702 SUPT5HO00267 1087 aaKnown RBP8.19□□□□□ -1.1
TRAF3IP3-216ENST00000488702 GHRHP01286 108 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms