RNA–Protein interactions for RNA: ENST00000488016.1

NECTIN3-209, Transcript of nectin cell adhesion molecule 3, humanhuman

TSL 3

Gene NECTIN3, Length 829 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECTIN3-209ENST00000488016 DIXDC1Q155Q3 683 aa10.44□□□□□ -0.74
NECTIN3-209ENST00000488016 MPRIPQ6WCQ1 1025 aa10.44□□□□□ -0.74
NECTIN3-209ENST00000488016 CCDC24Q8N4L8 307 aa10.44□□□□□ -0.74
NECTIN3-209ENST00000488016 SYMPKQ92797 1274 aaKnown RBP10.44□□□□□ -0.74
NECTIN3-209ENST00000488016 SPG7Q9UQ90 795 aa10.44□□□□□ -0.74
NECTIN3-209ENST00000488016 ITGB4P16144 1822 aa10.44□□□□□ -0.74
NECTIN3-209ENST00000488016 FAM187AA6NFU0 413 aa10.43□□□□□ -0.74
NECTIN3-209ENST00000488016 MOXD2PA6NHM9 499 aa10.43□□□□□ -0.74
NECTIN3-209ENST00000488016 DGAT1O75907 488 aa10.43□□□□□ -0.74
NECTIN3-209ENST00000488016 MTHFSDQ2M296 383 aaKnown RBP10.43□□□□□ -0.74
NECTIN3-209ENST00000488016 LCE2BO14633 110 aa10.42□□□□□ -0.74
NECTIN3-209ENST00000488016 NDUFV2P19404 249 aa10.42□□□□□ -0.74
NECTIN3-209ENST00000488016 PRKAR2BP31323 418 aa10.42□□□□□ -0.74
NECTIN3-209ENST00000488016 TXNRD1Q16881 649 aa10.42□□□□□ -0.74
NECTIN3-209ENST00000488016 PLEKHO1Q53GL0 409 aaPredicted RBP10.42□□□□□ -0.74
NECTIN3-209ENST00000488016 IFNL2Q8IZJ0 200 aa10.42□□□□□ -0.74
NECTIN3-209ENST00000488016 PHACTR3Q96KR7 559 aa10.42□□□□□ -0.74
NECTIN3-209ENST00000488016 CFAP53Q96M91 514 aa10.42□□□□□ -0.74
NECTIN3-209ENST00000488016 RSPH6AQ9H0K4 717 aa10.42□□□□□ -0.74
NECTIN3-209ENST00000488016 PRKRIP1Q9H875 184 aaPredicted RBP10.42□□□□□ -0.74
NECTIN3-209ENST00000488016 SLC24A3Q9HC58 644 aa10.42□□□□□ -0.74
NECTIN3-209ENST00000488016 PKD2L1Q9P0L9 805 aa10.42□□□□□ -0.74
NECTIN3-209ENST00000488016 CEP350Q5VT06 3117 aa10.41□□□□□ -0.74
NECTIN3-209ENST00000488016 U2AF1L5P0DN76 240 aaPredicted RBP10.41□□□□□ -0.74
NECTIN3-209ENST00000488016 U2AF1Q01081 240 aaKnown RBP eCLIP10.41□□□□□ -0.74
NECTIN3-209ENST00000488016 PDE4DQ08499 809 aa10.41□□□□□ -0.74
NECTIN3-209ENST00000488016 RALBP1Q15311 655 aa10.41□□□□□ -0.74
NECTIN3-209ENST00000488016 CCDC184Q52MB2 194 aa10.41□□□□□ -0.74
NECTIN3-209ENST00000488016 PIGBQ92521 554 aa10.41□□□□□ -0.74
NECTIN3-209ENST00000488016 TBC1D2Q9BYX2 928 aa10.41□□□□□ -0.74
NECTIN3-209ENST00000488016 PDGFDQ9GZP0 370 aaPredicted RBP10.41□□□□□ -0.74
NECTIN3-209ENST00000488016 SPON1Q9HCB6 807 aa10.41□□□□□ -0.74
NECTIN3-209ENST00000488016 LRRC4BQ9NT99 713 aa10.41□□□□□ -0.74
NECTIN3-209ENST00000488016 PCDHGC3Q9UN70 934 aa10.41□□□□□ -0.74
NECTIN3-209ENST00000488016 RGPD3A6NKT7 1758 aaPredicted RBP10.41□□□□□ -0.74
NECTIN3-209ENST00000488016 RGPD4Q7Z3J3 1758 aa10.41□□□□□ -0.74
NECTIN3-209ENST00000488016 MYBBP1AQ9BQG0 1328 aaKnown RBP10.4□□□□□ -0.74
NECTIN3-209ENST00000488016 PLSCR1O15162 318 aa10.4□□□□□ -0.74
NECTIN3-209ENST00000488016 MS4A1P11836 297 aa10.4□□□□□ -0.74
NECTIN3-209ENST00000488016 TRIM32Q13049 653 aa10.4□□□□□ -0.74
NECTIN3-209ENST00000488016 LGR6Q9HBX8 967 aa10.4□□□□□ -0.74
NECTIN3-209ENST00000488016 ZNF827Q17R98 1081 aa10.39□□□□□ -0.75
NECTIN3-209ENST00000488016 CYP4X1Q8N118 509 aa10.39□□□□□ -0.75
NECTIN3-209ENST00000488016 ASAP1Q9ULH1 1129 aa10.39□□□□□ -0.75
NECTIN3-209ENST00000488016 VIRMAQ69YN4 1812 aaKnown RBP10.39□□□□□ -0.75
NECTIN3-209ENST00000488016 PAPPAQ13219 1627 aa10.39□□□□□ -0.75
NECTIN3-209ENST00000488016 PALLDQ8WX93 1383 aa10.39□□□□□ -0.75
NECTIN3-209ENST00000488016 LY75O60449 1722 aa10.38□□□□□ -0.75
NECTIN3-209ENST00000488016 MTMR2Q13614 643 aa10.38□□□□□ -0.75
NECTIN3-209ENST00000488016 AMOTQ4VCS5 1084 aa10.38□□□□□ -0.75
NECTIN3-209ENST00000488016 C1orf141Q5JVX7 400 aa10.38□□□□□ -0.75
NECTIN3-209ENST00000488016 DIEXFQ68CQ4 756 aaKnown RBP10.38□□□□□ -0.75
NECTIN3-209ENST00000488016 SMIM5Q71RC9 77 aa10.38□□□□□ -0.75
NECTIN3-209ENST00000488016 TMOD3Q9NYL9 352 aa10.38□□□□□ -0.75
NECTIN3-209ENST00000488016 SCN11AQ9UI33 1791 aa10.37□□□□□ -0.75
NECTIN3-209ENST00000488016 SPDYE5A6NIY4 337 aa10.37□□□□□ -0.75
NECTIN3-209ENST00000488016 GJA5P36382 358 aa10.37□□□□□ -0.75
NECTIN3-209ENST00000488016 DCTN1Q14203 1278 aa10.37□□□□□ -0.75
NECTIN3-209ENST00000488016 CCDC146Q8IYE0 955 aa10.37□□□□□ -0.75
NECTIN3-209ENST00000488016 DCAF5Q96JK2 942 aa10.37□□□□□ -0.75
NECTIN3-209ENST00000488016 NUDT12Q9BQG2 462 aa10.37□□□□□ -0.75
NECTIN3-209ENST00000488016 NUDCQ9Y266 331 aa10.37□□□□□ -0.75
NECTIN3-209ENST00000488016 TUBGCP6Q96RT7 1819 aa10.36□□□□□ -0.75
NECTIN3-209ENST00000488016 RNMTO43148 476 aaKnown RBP10.36□□□□□ -0.75
NECTIN3-209ENST00000488016 CENPBP07199 599 aaPredicted RBP10.36□□□□□ -0.75
NECTIN3-209ENST00000488016 CABP4P57796 275 aa10.36□□□□□ -0.75
NECTIN3-209ENST00000488016 AKAP4Q5JQC9 854 aa10.36□□□□□ -0.75
NECTIN3-209ENST00000488016 NBPF14Q5TI25 921 aa10.36□□□□□ -0.75
NECTIN3-209ENST00000488016 RSBN1LQ6PCB5 846 aaPredicted RBP10.36□□□□□ -0.75
NECTIN3-209ENST00000488016 NFATC2IPQ8NCF5 419 aa10.36□□□□□ -0.75
NECTIN3-209ENST00000488016 SLC4A9Q96Q91 983 aa10.36□□□□□ -0.75
NECTIN3-209ENST00000488016 ATG3Q9NT62 314 aa10.36□□□□□ -0.75
NECTIN3-209ENST00000488016 CCNL1Q9UK58 526 aaPredicted RBP10.36□□□□□ -0.75
NECTIN3-209ENST00000488016 ADAMTS7Q9UKP4 1686 aa10.35□□□□□ -0.75
NECTIN3-209ENST00000488016 WNT7AO00755 349 aa10.35□□□□□ -0.75
NECTIN3-209ENST00000488016 SLC39A6Q13433 755 aa10.35□□□□□ -0.75
NECTIN3-209ENST00000488016 AMIGO3Q86WK7 504 aa10.35□□□□□ -0.75
NECTIN3-209ENST00000488016 IL17REQ8NFR9 667 aa10.35□□□□□ -0.75
NECTIN3-209ENST00000488016 PRR7Q8TB68 274 aa10.35□□□□□ -0.75
NECTIN3-209ENST00000488016 PLEKHF1Q96S99 279 aa10.35□□□□□ -0.75
NECTIN3-209ENST00000488016 MAP3K5Q99683 1374 aa10.35□□□□□ -0.75
NECTIN3-209ENST00000488016 PLEKHG2Q9H7P9 1386 aa10.35□□□□□ -0.75
NECTIN3-209ENST00000488016 C5P01031 1676 aa10.34□□□□□ -0.75
NECTIN3-209ENST00000488016 TTC24A2A3L6 582 aaPredicted RBP10.34□□□□□ -0.75
NECTIN3-209ENST00000488016 ERVV-2B6SEH9 535 aa10.34□□□□□ -0.75
NECTIN3-209ENST00000488016 HSP90AB1P08238 724 aaKnown RBP10.34□□□□□ -0.75
NECTIN3-209ENST00000488016 ITPK1Q13572 414 aa10.34□□□□□ -0.75
NECTIN3-209ENST00000488016 SLC15A2Q16348 729 aa10.34□□□□□ -0.75
NECTIN3-209ENST00000488016 MCM10Q7L590 875 aa10.34□□□□□ -0.75
NECTIN3-209ENST00000488016 LINC00116Q8NCU8 138 aa10.34□□□□□ -0.75
NECTIN3-209ENST00000488016 RRP7AQ9Y3A4 280 aaKnown RBP10.34□□□□□ -0.75
NECTIN3-209ENST00000488016 MRC1P22897 1456 aa10.34□□□□□ -0.75
NECTIN3-209ENST00000488016 CASZ1Q86V15 1759 aa10.34□□□□□ -0.75
NECTIN3-209ENST00000488016 TAF1LQ8IZX4 1826 aa10.33□□□□□ -0.76
NECTIN3-209ENST00000488016 DLG5Q8TDM6 1919 aa10.33□□□□□ -0.76
NECTIN3-209ENST00000488016 SPTLC1O15269 473 aa10.33□□□□□ -0.76
NECTIN3-209ENST00000488016 PTCD1O75127 700 aaKnown RBP10.33□□□□□ -0.76
NECTIN3-209ENST00000488016 CCNYL3P0C7X3 344 aa10.33□□□□□ -0.76
NECTIN3-209ENST00000488016 PTPRNQ16849 979 aa10.33□□□□□ -0.76
NECTIN3-209ENST00000488016 GAS2L2Q8NHY3 880 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms