RNA–Protein interactions for RNA: ENST00000487952.1

NUP188-207, Transcript of nucleoporin 188, humanhuman

TSL 2

Gene NUP188, Length 568 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-207ENST00000487952 KLRG2A4D1S0 409 aaPredicted RBP17.55■□□□□ 0.4
NUP188-207ENST00000487952 NPR1P16066 1061 aa17.55■□□□□ 0.4
NUP188-207ENST00000487952 TGFB2P61812 414 aa17.55■□□□□ 0.4
NUP188-207ENST00000487952 RABL6Q3YEC7 729 aaPredicted RBP17.55■□□□□ 0.4
NUP188-207ENST00000487952 ANKRD44Q8N8A2 993 aa17.55■□□□□ 0.4
NUP188-207ENST00000487952 ZNF622Q969S3 477 aaKnown RBP eCLIP17.55■□□□□ 0.4
NUP188-207ENST00000487952 LAMB2P55268 1798 aa17.55■□□□□ 0.4
NUP188-207ENST00000487952 ANKRD18BA2A2Z9 1011 aa17.54■□□□□ 0.4
NUP188-207ENST00000487952 CSF1RP07333 972 aa17.54■□□□□ 0.4
NUP188-207ENST00000487952 CHRNA5P30532 468 aa17.54■□□□□ 0.4
NUP188-207ENST00000487952 IFIT5Q13325 482 aaKnown RBP17.54■□□□□ 0.4
NUP188-207ENST00000487952 CCDC57Q2TAC2 916 aa17.54■□□□□ 0.4
NUP188-207ENST00000487952 FAM161AQ3B820 660 aa17.54■□□□□ 0.4
NUP188-207ENST00000487952 CRY2Q49AN0 593 aa17.54■□□□□ 0.4
NUP188-207ENST00000487952 TAF7LQ5H9L4 462 aa17.54■□□□□ 0.4
NUP188-207ENST00000487952 MASTLQ96GX5 879 aa17.54■□□□□ 0.4
NUP188-207ENST00000487952 DDX60Q8IY21 1712 aaKnown RBP17.54■□□□□ 0.4
NUP188-207ENST00000487952 TNRC6CQ9HCJ0 1690 aaKnown RBP17.53■□□□□ 0.4
NUP188-207ENST00000487952 SRGNP10124 158 aa17.53■□□□□ 0.4
NUP188-207ENST00000487952 STYK1Q6J9G0 422 aa17.53■□□□□ 0.4
NUP188-207ENST00000487952 CDC5LQ99459 802 aaKnown RBP17.53■□□□□ 0.4
NUP188-207ENST00000487952 FHDC1Q9C0D6 1143 aaPredicted RBP17.53■□□□□ 0.4
NUP188-207ENST00000487952 GREM2Q9H772 168 aa17.53■□□□□ 0.4
NUP188-207ENST00000487952 RTL9Q8NET4 1388 aa17.53■□□□□ 0.4
NUP188-207ENST00000487952 A0A0G2JLW4 131 aa17.52■□□□□ 0.4
NUP188-207ENST00000487952 SRGAP3O43295 1099 aa17.52■□□□□ 0.4
NUP188-207ENST00000487952 HMMRO75330 724 aa17.52■□□□□ 0.4
NUP188-207ENST00000487952 DPEP1P16444 411 aa17.52■□□□□ 0.4
NUP188-207ENST00000487952 ITGA6P23229 1130 aa17.52■□□□□ 0.4
NUP188-207ENST00000487952 MTX1Q13505 466 aa17.52■□□□□ 0.4
NUP188-207ENST00000487952 CEP85Q6P2H3 762 aa17.52■□□□□ 0.4
NUP188-207ENST00000487952 RPAP2Q8IXW5 612 aaPredicted RBP17.52■□□□□ 0.4
NUP188-207ENST00000487952 ANKRD31Q8N7Z5 1873 aa17.52■□□□□ 0.39
NUP188-207ENST00000487952 ALDH1B1P30837 517 aa17.51■□□□□ 0.39
NUP188-207ENST00000487952 IGHMBP2P38935 993 aaKnown RBP17.51■□□□□ 0.39
NUP188-207ENST00000487952 ATP8B2P98198 1209 aa17.51■□□□□ 0.39
NUP188-207ENST00000487952 ANKRD18AQ8IVF6 992 aa17.51■□□□□ 0.39
NUP188-207ENST00000487952 CNKSR1Q969H4 720 aa17.51■□□□□ 0.39
NUP188-207ENST00000487952 CRAMP1Q96RY5 1269 aa17.51■□□□□ 0.39
NUP188-207ENST00000487952 SEC31BQ9NQW1 1179 aa17.51■□□□□ 0.39
NUP188-207ENST00000487952 LRP5O75197 1615 aa17.5■□□□□ 0.39
NUP188-207ENST00000487952 HOXA10P31260 410 aaPredicted RBP17.5■□□□□ 0.39
NUP188-207ENST00000487952 GRAPQ13588 217 aa17.5■□□□□ 0.39
NUP188-207ENST00000487952 GRAPLQ8TC17 118 aaPredicted RBP17.5■□□□□ 0.39
NUP188-207ENST00000487952 MYH3P11055 1940 aa17.5■□□□□ 0.39
NUP188-207ENST00000487952 NLGN2Q8NFZ4 835 aa17.49■□□□□ 0.39
NUP188-207ENST00000487952 MPHOSPH8Q99549 860 aa17.49■□□□□ 0.39
NUP188-207ENST00000487952 TMX4Q9H1E5 349 aaPredicted RBP17.49■□□□□ 0.39
NUP188-207ENST00000487952 PIM2Q9P1W9 311 aa17.49■□□□□ 0.39
NUP188-207ENST00000487952 KIF13BQ9NQT8 1826 aa17.49■□□□□ 0.39
NUP188-207ENST00000487952 PNMA6EA0A0J9YXQ4 647 aa17.48■□□□□ 0.39
NUP188-207ENST00000487952 RPS8P62241 208 aaKnown RBP17.48■□□□□ 0.39
NUP188-207ENST00000487952 TTLL6Q8N841 843 aa17.48■□□□□ 0.39
NUP188-207ENST00000487952 SYT17Q9BSW7 474 aa17.48■□□□□ 0.39
NUP188-207ENST00000487952 PPEF1O14829 653 aaPredicted RBP17.47■□□□□ 0.39
NUP188-207ENST00000487952 BBOX1O75936 387 aa17.47■□□□□ 0.39
NUP188-207ENST00000487952 TMC4Q7Z404 712 aa17.47■□□□□ 0.39
NUP188-207ENST00000487952 SSH3Q8TE77 659 aa17.47■□□□□ 0.39
NUP188-207ENST00000487952 CELF1Q92879 486 aaKnown RBP17.47■□□□□ 0.39
NUP188-207ENST00000487952 ZNF594Q96JF6 807 aaPredicted RBP17.47■□□□□ 0.39
NUP188-207ENST00000487952 CNNM1Q9NRU3 951 aa17.47■□□□□ 0.39
NUP188-207ENST00000487952 PCDHB15Q9Y5E8 787 aa17.47■□□□□ 0.39
NUP188-207ENST00000487952 COL11A2P13942 1736 aaPredicted RBP17.47■□□□□ 0.39
NUP188-207ENST00000487952 POLA2Q14181 598 aa17.46■□□□□ 0.39
NUP188-207ENST00000487952 DALRD3Q5D0E6 543 aaKnown RBP17.46■□□□□ 0.39
NUP188-207ENST00000487952 PRPF40BQ6NWY9 871 aaKnown RBP17.46■□□□□ 0.39
NUP188-207ENST00000487952 LDHAL6AQ6ZMR3 332 aa17.46■□□□□ 0.39
NUP188-207ENST00000487952 KCNA3P22001 575 aa17.45■□□□□ 0.38
NUP188-207ENST00000487952 RFX5P48382 616 aaPredicted RBP17.45■□□□□ 0.38
NUP188-207ENST00000487952 PTPN12Q05209 780 aaKnown RBP17.45■□□□□ 0.38
NUP188-207ENST00000487952 OS9Q13438 667 aaPredicted RBP17.45■□□□□ 0.38
NUP188-207ENST00000487952 ERICH6BQ5W0A0 696 aa17.45■□□□□ 0.38
NUP188-207ENST00000487952 KLHDC4Q8TBB5 520 aa17.45■□□□□ 0.38
NUP188-207ENST00000487952 SIL1Q9H173 461 aa17.45■□□□□ 0.38
NUP188-207ENST00000487952 COPRSQ9NQ92 184 aa17.45■□□□□ 0.38
NUP188-207ENST00000487952 WWC3Q9ULE0 1092 aa17.45■□□□□ 0.38
NUP188-207ENST00000487952 PA2G4Q9UQ80 394 aaKnown RBP17.45■□□□□ 0.38
NUP188-207ENST00000487952 SURF6O75683 361 aaKnown RBP17.44■□□□□ 0.38
NUP188-207ENST00000487952 G3BP1Q13283 466 aaKnown RBP eCLIP17.44■□□□□ 0.384e-6■■■□□ 17.6
NUP188-207ENST00000487952 RWDD1Q9H446 243 aaPredicted RBP17.44■□□□□ 0.38
NUP188-207ENST00000487952 BSDC1Q9NW68 430 aaPredicted RBP17.44■□□□□ 0.38
NUP188-207ENST00000487952 ZNF219Q9P2Y4 722 aaPredicted RBP17.44■□□□□ 0.38
NUP188-207ENST00000487952 FBXO3Q9UK99 471 aa17.44■□□□□ 0.38
NUP188-207ENST00000487952 BCS1LQ9Y276 419 aa17.44■□□□□ 0.38
NUP188-207ENST00000487952 EYA2O00167 538 aa17.43■□□□□ 0.38
NUP188-207ENST00000487952 HSP90AB4PQ58FF6 505 aa17.43■□□□□ 0.38
NUP188-207ENST00000487952 SIRT2Q8IXJ6 389 aa17.43■□□□□ 0.38
NUP188-207ENST00000487952 KIAA1551Q9HCM1 1747 aa17.41■□□□□ 0.38
NUP188-207ENST00000487952 DLEC1Q9Y238 1755 aa17.41■□□□□ 0.38
NUP188-207ENST00000487952 CIAO1O76071 339 aa17.41■□□□□ 0.38
NUP188-207ENST00000487952 HDAC1Q13547 482 aaPredicted RBP17.41■□□□□ 0.38
NUP188-207ENST00000487952 LRRC24Q50LG9 513 aa17.41■□□□□ 0.38
NUP188-207ENST00000487952 METTL24Q5JXM2 366 aa17.41■□□□□ 0.38
NUP188-207ENST00000487952 SOGA3Q5TF21 947 aa17.41■□□□□ 0.38
NUP188-207ENST00000487952 CC2D2BQ6DHV5 1058 aa17.41■□□□□ 0.38
NUP188-207ENST00000487952 SP8Q8IXZ3 490 aa17.41■□□□□ 0.38
NUP188-207ENST00000487952 PELP1Q8IZL8 1130 aaKnown RBP17.41■□□□□ 0.38
NUP188-207ENST00000487952 PUS3Q9BZE2 481 aaKnown RBP17.41■□□□□ 0.38
NUP188-207ENST00000487952 ATP6V0A2Q9Y487 856 aa17.41■□□□□ 0.38
NUP188-207ENST00000487952 C21orf2O43822 256 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms