RNA–Protein interactions for RNA: ENST00000487739.1

CCDC66-221, Transcript of coiled-coil domain containing 66, humanhuman

TSL 3

Gene CCDC66, Length 443 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-221ENST00000487739 FAM35AQ86V20 835 aa8.49□□□□□ -1.05
CCDC66-221ENST00000487739 TREML1Q86YW5 311 aa8.49□□□□□ -1.05
CCDC66-221ENST00000487739 COL26A1Q96A83 441 aa8.49□□□□□ -1.05
CCDC66-221ENST00000487739 CCDC97Q96F63 343 aaPredicted RBP8.49□□□□□ -1.05
CCDC66-221ENST00000487739 ZFATQ9P243 1243 aa8.49□□□□□ -1.05
CCDC66-221ENST00000487739 RTCBQ9Y3I0 505 aaKnown RBP8.49□□□□□ -1.05
CCDC66-221ENST00000487739 OPLAHO14841 1288 aa8.48□□□□□ -1.05
CCDC66-221ENST00000487739 SASH3O75995 380 aa8.48□□□□□ -1.05
CCDC66-221ENST00000487739 CPB1P15086 417 aa8.48□□□□□ -1.05
CCDC66-221ENST00000487739 TARSP26639 723 aaKnown RBP8.48□□□□□ -1.05
CCDC66-221ENST00000487739 AFF1P51825 1210 aaKnown RBP8.48□□□□□ -1.05
CCDC66-221ENST00000487739 RAC1P63000 192 aa8.48□□□□□ -1.05
CCDC66-221ENST00000487739 C16orf46Q6P387 395 aa8.48□□□□□ -1.05
CCDC66-221ENST00000487739 TRPM4Q8TD43 1214 aa8.48□□□□□ -1.05
CCDC66-221ENST00000487739 A0A0A0MRY4 1105 aa8.47□□□□□ -1.05
CCDC66-221ENST00000487739 ELNP15502 786 aa8.47□□□□□ -1.05
CCDC66-221ENST00000487739 GPLD1P80108 840 aa8.47□□□□□ -1.05
CCDC66-221ENST00000487739 DOC2BQ14184 412 aa8.47□□□□□ -1.05
CCDC66-221ENST00000487739 GRIK4Q16099 956 aa8.47□□□□□ -1.05
CCDC66-221ENST00000487739 RGL4Q8IZJ4 473 aa8.47□□□□□ -1.05
CCDC66-221ENST00000487739 PBXIP1Q96AQ6 731 aa8.47□□□□□ -1.05
CCDC66-221ENST00000487739 FRRS1LQ9P0K9 344 aa8.47□□□□□ -1.05
CCDC66-221ENST00000487739 CXXC1Q9P0U4 656 aaPredicted RBP8.47□□□□□ -1.05
CCDC66-221ENST00000487739 PTCD1O75127 700 aaKnown RBP8.46□□□□□ -1.06
CCDC66-221ENST00000487739 XYLBO75191 536 aa8.46□□□□□ -1.06
CCDC66-221ENST00000487739 EGFRP00533 1210 aa8.46□□□□□ -1.06
CCDC66-221ENST00000487739 BRD2P25440 801 aaKnown RBP8.46□□□□□ -1.06
CCDC66-221ENST00000487739 TMEM164Q5U3C3 297 aa8.46□□□□□ -1.06
CCDC66-221ENST00000487739 CMTR1Q8N1G2 835 aaKnown RBP8.46□□□□□ -1.06
CCDC66-221ENST00000487739 SERPINA10Q9UK55 444 aa8.46□□□□□ -1.06
CCDC66-221ENST00000487739 USP20Q9Y2K6 914 aa8.46□□□□□ -1.06
CCDC66-221ENST00000487739 C9orf172C9J069 976 aa8.45□□□□□ -1.06
CCDC66-221ENST00000487739 NRLP54845 237 aa8.45□□□□□ -1.06
CCDC66-221ENST00000487739 PERM1Q5SV97 790 aa8.45□□□□□ -1.06
CCDC66-221ENST00000487739 ELMSAN1Q6PJG2 1045 aa8.45□□□□□ -1.06
CCDC66-221ENST00000487739 LPIN3Q9BQK8 851 aa8.45□□□□□ -1.06
CCDC66-221ENST00000487739 MKNK1Q9BUB5 465 aa8.45□□□□□ -1.06
CCDC66-221ENST00000487739 SAP130Q9H0E3 1048 aa8.45□□□□□ -1.06
CCDC66-221ENST00000487739 ZBTB42B2RXF5 422 aa8.44□□□□□ -1.06
CCDC66-221ENST00000487739 MLLT1Q03111 559 aaPredicted RBP8.44□□□□□ -1.06
CCDC66-221ENST00000487739 ETFBKMTQ8IXQ9 262 aa8.44□□□□□ -1.06
CCDC66-221ENST00000487739 CLP1Q92989 425 aaKnown RBP8.44□□□□□ -1.06
CCDC66-221ENST00000487739 TLR7Q9NYK1 1049 aaKnown RBP8.44□□□□□ -1.06
CCDC66-221ENST00000487739 MSL1Q68DK7 614 aa8.43□□□□□ -1.06
CCDC66-221ENST00000487739 DMRTC2Q8IXT2 367 aaPredicted RBP8.43□□□□□ -1.06
CCDC66-221ENST00000487739 FMR1NBQ8N0W7 255 aaPredicted RBP8.43□□□□□ -1.06
CCDC66-221ENST00000487739 FAM13BQ9NYF5 915 aa8.43□□□□□ -1.06
CCDC66-221ENST00000487739 KCNMB2Q9Y691 235 aa8.43□□□□□ -1.06
CCDC66-221ENST00000487739 PSAPP07602 524 aa8.42□□□□□ -1.06
CCDC66-221ENST00000487739 EIF2AK2P19525 551 aaKnown RBP8.42□□□□□ -1.06
CCDC66-221ENST00000487739 PLAURQ03405 335 aa8.42□□□□□ -1.06
CCDC66-221ENST00000487739 DTWD1Q8N5C7 304 aa8.42□□□□□ -1.06
CCDC66-221ENST00000487739 TTC9Q92623 222 aa8.42□□□□□ -1.06
CCDC66-221ENST00000487739 SEMA6BQ9H3T3 888 aa8.42□□□□□ -1.06
CCDC66-221ENST00000487739 TPSG1Q9NRR2 321 aa8.42□□□□□ -1.06
CCDC66-221ENST00000487739 TNFRSF10BO14763 440 aa8.41□□□□□ -1.06
CCDC66-221ENST00000487739 SELPP16109 830 aa8.41□□□□□ -1.06
CCDC66-221ENST00000487739 NRG1Q02297 640 aaPredicted RBP8.41□□□□□ -1.06
CCDC66-221ENST00000487739 ADGRE1Q14246 886 aa8.41□□□□□ -1.06
CCDC66-221ENST00000487739 NAA30Q147X3 362 aaPredicted RBP8.41□□□□□ -1.06
CCDC66-221ENST00000487739 GRIK5Q16478 980 aa8.41□□□□□ -1.06
CCDC66-221ENST00000487739 ILDR2Q71H61 639 aa8.41□□□□□ -1.06
CCDC66-221ENST00000487739 WFDC8Q8IUA0 241 aa8.41□□□□□ -1.06
CCDC66-221ENST00000487739 LENG1Q96BZ8 264 aaPredicted RBP8.41□□□□□ -1.06
CCDC66-221ENST00000487739 SMG9Q9H0W8 520 aaKnown RBP8.41□□□□□ -1.06
CCDC66-221ENST00000487739 MMP20O60882 483 aa8.4□□□□□ -1.06
CCDC66-221ENST00000487739 SOX18P35713 384 aa8.4□□□□□ -1.06
CCDC66-221ENST00000487739 MBTPS1Q14703 1052 aa8.4□□□□□ -1.06
CCDC66-221ENST00000487739 RSPO4Q2I0M5 234 aaPredicted RBP8.4□□□□□ -1.06
CCDC66-221ENST00000487739 CAPN12Q6ZSI9 719 aa8.4□□□□□ -1.06
CCDC66-221ENST00000487739 HFE2Q6ZVN8 426 aa8.4□□□□□ -1.06
CCDC66-221ENST00000487739 PIK3R5Q8WYR1 880 aa8.4□□□□□ -1.06
CCDC66-221ENST00000487739 HOXD8P13378 290 aaPredicted RBP8.39□□□□□ -1.07
CCDC66-221ENST00000487739 TRIP4Q15650 581 aaPredicted RBP8.39□□□□□ -1.07
CCDC66-221ENST00000487739 TXNRD3Q86VQ6 643 aa8.39□□□□□ -1.07
CCDC66-221ENST00000487739 NLRP13Q86W25 1043 aa8.39□□□□□ -1.07
CCDC66-221ENST00000487739 NSUN5Q96P11 429 aaKnown RBP8.39□□□□□ -1.07
CCDC66-221ENST00000487739 RBSNQ9H1K0 784 aa8.39□□□□□ -1.07
CCDC66-221ENST00000487739 USP21Q9UK80 565 aa8.39□□□□□ -1.07
CCDC66-221ENST00000487739 GTF3C3Q9Y5Q9 886 aa8.39□□□□□ -1.07
CCDC66-221ENST00000487739 LOC102724428A0A0B4J2F2 783 aa8.38□□□□□ -1.07
CCDC66-221ENST00000487739 ARID3CA6NKF2 412 aa8.38□□□□□ -1.07
CCDC66-221ENST00000487739 GHRHP01286 108 aa8.38□□□□□ -1.07
CCDC66-221ENST00000487739 ATP2B4P23634 1241 aa8.38□□□□□ -1.07
CCDC66-221ENST00000487739 SIK1P57059 783 aa8.38□□□□□ -1.07
CCDC66-221ENST00000487739 FAM26DQ5JW98 314 aa8.38□□□□□ -1.07
CCDC66-221ENST00000487739 NKAPLQ5M9Q1 402 aa8.38□□□□□ -1.07
CCDC66-221ENST00000487739 SHISA2Q6UWI4 295 aa8.38□□□□□ -1.07
CCDC66-221ENST00000487739 ABTB2Q8N961 1025 aa8.38□□□□□ -1.07
CCDC66-221ENST00000487739 PLD4Q96BZ4 506 aa8.38□□□□□ -1.07
CCDC66-221ENST00000487739 STIM2Q9P246 746 aa8.38□□□□□ -1.07
CCDC66-221ENST00000487739 UBAP1LF5GYI3 381 aa8.37□□□□□ -1.07
CCDC66-221ENST00000487739 ZAP70P43403 619 aa8.37□□□□□ -1.07
CCDC66-221ENST00000487739 FBXO11Q86XK2 927 aa8.37□□□□□ -1.07
CCDC66-221ENST00000487739 J3QW42 95 aa8.36□□□□□ -1.07
CCDC66-221ENST00000487739 ITGB7P26010 798 aa8.36□□□□□ -1.07
CCDC66-221ENST00000487739 SLAIN2Q9P270 581 aa8.36□□□□□ -1.07
CCDC66-221ENST00000487739 FNDC3AQ9Y2H6 1198 aaKnown RBP8.36□□□□□ -1.07
CCDC66-221ENST00000487739 DYRK3O43781 588 aa8.35□□□□□ -1.07
CCDC66-221ENST00000487739 GPR152Q8TDT2 470 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 81.1 ms