RNA–Protein interactions for RNA: ENST00000487676.1

HLA-DQB1-209, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

Gene HLA-DQB1, Length 4,644 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-209ENST00000487676 CNNM3Q8NE01 707 aa17.63■□□□□ 0.41
HLA-DQB1-209ENST00000487676 GOLGA6L10A6NI86 522 aa17.63■□□□□ 0.41
HLA-DQB1-209ENST00000487676 PHACTR2O75167 634 aa17.63■□□□□ 0.41
HLA-DQB1-209ENST00000487676 MKRN1Q9UHC7 482 aaKnown RBP17.63■□□□□ 0.41
HLA-DQB1-209ENST00000487676 ZBTB22O15209 634 aa17.63■□□□□ 0.41
HLA-DQB1-209ENST00000487676 NAA30Q147X3 362 aaPredicted RBP17.63■□□□□ 0.41
HLA-DQB1-209ENST00000487676 EFCAB8A8MWE9 144 aa17.62■□□□□ 0.41
HLA-DQB1-209ENST00000487676 CCDC175P0C221 793 aa17.62■□□□□ 0.41
HLA-DQB1-209ENST00000487676 KMT5BQ4FZB7 885 aa17.62■□□□□ 0.41
HLA-DQB1-209ENST00000487676 NUTM2GQ5VZR2 741 aa17.62■□□□□ 0.41
HLA-DQB1-209ENST00000487676 PATL2C9JE40 543 aaKnown RBP17.62■□□□□ 0.41
HLA-DQB1-209ENST00000487676 PSDA5PKW4 1024 aaPredicted RBP17.62■□□□□ 0.41
HLA-DQB1-209ENST00000487676 CCDC181Q5TID7 509 aa17.62■□□□□ 0.41
HLA-DQB1-209ENST00000487676 MYCBPQ99417 103 aaPredicted RBP17.62■□□□□ 0.41
HLA-DQB1-209ENST00000487676 RAI14Q9P0K7 980 aa17.62■□□□□ 0.41
HLA-DQB1-209ENST00000487676 PIK3R4Q99570 1358 aa17.62■□□□□ 0.41
HLA-DQB1-209ENST00000487676 CPLX3Q8WVH0 158 aa17.62■□□□□ 0.41
HLA-DQB1-209ENST00000487676 PLA2R1Q13018 1463 aa17.61■□□□□ 0.41
HLA-DQB1-209ENST00000487676 NR1I2O75469 434 aa17.61■□□□□ 0.41
HLA-DQB1-209ENST00000487676 SYKP43405 635 aa17.61■□□□□ 0.41
HLA-DQB1-209ENST00000487676 CCDC158Q5M9N0 1113 aa17.61■□□□□ 0.41
HLA-DQB1-209ENST00000487676 SYTL4Q96C24 671 aaPredicted RBP17.61■□□□□ 0.41
HLA-DQB1-209ENST00000487676 POLR3DP05423 398 aaPredicted RBP17.61■□□□□ 0.41
HLA-DQB1-209ENST00000487676 CT47A1Q5JQC4 288 aaPredicted RBP17.61■□□□□ 0.41
HLA-DQB1-209ENST00000487676 NUDT16Q96DE0 195 aaKnown RBP17.61■□□□□ 0.41
HLA-DQB1-209ENST00000487676 PIP4K2BP78356 416 aa17.6■□□□□ 0.41
HLA-DQB1-209ENST00000487676 CCDC102BQ68D86 513 aa17.6■□□□□ 0.41
HLA-DQB1-209ENST00000487676 RIMS2Q9UQ26 1411 aa17.6■□□□□ 0.41
HLA-DQB1-209ENST00000487676 CLCN6P51797 869 aa17.6■□□□□ 0.41
HLA-DQB1-209ENST00000487676 DNAJC21Q5F1R6 531 aaKnown RBP17.6■□□□□ 0.41
HLA-DQB1-209ENST00000487676 TTC37Q6PGP7 1564 aa17.6■□□□□ 0.41
HLA-DQB1-209ENST00000487676 DTNBO60941 627 aa17.6■□□□□ 0.41
HLA-DQB1-209ENST00000487676 PNMA6AP0CW24 399 aaPredicted RBP17.6■□□□□ 0.41
HLA-DQB1-209ENST00000487676 XBP1P17861 261 aa17.6■□□□□ 0.41
HLA-DQB1-209ENST00000487676 CERS3Q8IU89 383 aa17.6■□□□□ 0.41
HLA-DQB1-209ENST00000487676 ERICH2A1L162 156 aa17.6■□□□□ 0.41
HLA-DQB1-209ENST00000487676 KCNF1Q9H3M0 494 aa17.6■□□□□ 0.41
HLA-DQB1-209ENST00000487676 ARHGEF5Q12774 1597 aa17.59■□□□□ 0.41
HLA-DQB1-209ENST00000487676 Q6ZUG5 572 aa17.59■□□□□ 0.41
HLA-DQB1-209ENST00000487676 KIAA1328Q86T90 577 aa17.59■□□□□ 0.41
HLA-DQB1-209ENST00000487676 PUF60Q9UHX1 559 aaKnown RBP17.59■□□□□ 0.41
HLA-DQB1-209ENST00000487676 CTAGE9A4FU28 777 aa17.59■□□□□ 0.41
HLA-DQB1-209ENST00000487676 ME3Q16798 604 aa17.59■□□□□ 0.41
HLA-DQB1-209ENST00000487676 BAG1Q99933 345 aaPredicted RBP17.59■□□□□ 0.41
HLA-DQB1-209ENST00000487676 MAGEC2Q9UBF1 373 aaPredicted RBP17.59■□□□□ 0.41
HLA-DQB1-209ENST00000487676 ARHGAP6O43182 974 aa17.59■□□□□ 0.41
HLA-DQB1-209ENST00000487676 SLFN14P0C7P3 912 aa17.59■□□□□ 0.41
HLA-DQB1-209ENST00000487676 NLRP6P59044 892 aa17.58■□□□□ 0.41
HLA-DQB1-209ENST00000487676 NMIQ13287 307 aaPredicted RBP17.58■□□□□ 0.41
HLA-DQB1-209ENST00000487676 KARSQ15046 597 aaKnown RBP17.58■□□□□ 0.41
HLA-DQB1-209ENST00000487676 RRP15Q9Y3B9 282 aaKnown RBP17.58■□□□□ 0.41
HLA-DQB1-209ENST00000487676 CHMP4BP1P59074 171 aa17.58■□□□□ 0.4
HLA-DQB1-209ENST00000487676 BRD3Q15059 726 aa17.58■□□□□ 0.4
HLA-DQB1-209ENST00000487676 SPTLC2O15270 562 aa17.58■□□□□ 0.4
HLA-DQB1-209ENST00000487676 FANCCQ00597 558 aa17.58■□□□□ 0.4
HLA-DQB1-209ENST00000487676 XPO4Q9C0E2 1151 aaKnown RBP17.58■□□□□ 0.4
HLA-DQB1-209ENST00000487676 PTCH1Q13635 1447 aa17.58■□□□□ 0.4
HLA-DQB1-209ENST00000487676 PNMA6EA0A0J9YXQ4 647 aa17.57■□□□□ 0.4
HLA-DQB1-209ENST00000487676 GOLGA6L7A0A1B0GV03 622 aa17.57■□□□□ 0.4
HLA-DQB1-209ENST00000487676 CHL1O00533 1208 aa17.57■□□□□ 0.4
HLA-DQB1-209ENST00000487676 MYL5Q02045 173 aa17.57■□□□□ 0.4
HLA-DQB1-209ENST00000487676 RNF187Q5TA31 235 aaPredicted RBP17.57■□□□□ 0.4
HLA-DQB1-209ENST00000487676 G2E3Q7L622 706 aa17.57■□□□□ 0.4
HLA-DQB1-209ENST00000487676 TXNDC2Q86VQ3 553 aa17.57■□□□□ 0.4
HLA-DQB1-209ENST00000487676 HYPKQ9NX55 129 aa17.57■□□□□ 0.4
HLA-DQB1-209ENST00000487676 RPS6KB1P23443 525 aa17.57■□□□□ 0.4
HLA-DQB1-209ENST00000487676 ORC3Q9UBD5 711 aaPredicted RBP17.57■□□□□ 0.4
HLA-DQB1-209ENST00000487676 WAPLQ7Z5K2 1190 aa17.57■□□□□ 0.4
HLA-DQB1-209ENST00000487676 CTCFLQ8NI51 663 aaPredicted RBP17.57■□□□□ 0.4
HLA-DQB1-209ENST00000487676 RAD51AP2Q09MP3 1159 aa17.57■□□□□ 0.4
HLA-DQB1-209ENST00000487676 KLHL10Q6JEL2 608 aa17.57■□□□□ 0.4
HLA-DQB1-209ENST00000487676 RHOXF2BP0C7M4 288 aa17.56■□□□□ 0.4
HLA-DQB1-209ENST00000487676 TUBB2AQ13885 445 aa17.56■□□□□ 0.4
HLA-DQB1-209ENST00000487676 TRIM22Q8IYM9 498 aa17.56■□□□□ 0.4
HLA-DQB1-209ENST00000487676 RHOXF2Q9BQY4 288 aa17.56■□□□□ 0.4
HLA-DQB1-209ENST00000487676 TUBB2BQ9BVA1 445 aa17.56■□□□□ 0.4
HLA-DQB1-209ENST00000487676 STAP2Q9UGK3 403 aa17.56■□□□□ 0.4
HLA-DQB1-209ENST00000487676 BRMS1Q9HCU9 246 aa17.56■□□□□ 0.4
HLA-DQB1-209ENST00000487676 A0A1B0GVL5 298 aa17.56■□□□□ 0.4
HLA-DQB1-209ENST00000487676 WDHD1O75717 1129 aaPredicted RBP17.56■□□□□ 0.4
HLA-DQB1-209ENST00000487676 LRRC2Q9BYS8 371 aa17.56■□□□□ 0.4
HLA-DQB1-209ENST00000487676 ZNF330Q9Y3S2 320 aaPredicted RBP17.56■□□□□ 0.4
HLA-DQB1-209ENST00000487676 MYO1CO00159 1063 aa17.56■□□□□ 0.4
HLA-DQB1-209ENST00000487676 ACTN2P35609 894 aa17.56■□□□□ 0.4
HLA-DQB1-209ENST00000487676 IMMTQ16891 758 aaKnown RBP17.56■□□□□ 0.4
HLA-DQB1-209ENST00000487676 EXOC4Q96A65 974 aa17.56■□□□□ 0.4
HLA-DQB1-209ENST00000487676 PPP1R13BQ96KQ4 1090 aa17.56■□□□□ 0.4
HLA-DQB1-209ENST00000487676 PPFIA3O75145 1194 aa17.55■□□□□ 0.4
HLA-DQB1-209ENST00000487676 NF2P35240 595 aa17.55■□□□□ 0.4
HLA-DQB1-209ENST00000487676 AFAP1L1Q8TED9 768 aa17.55■□□□□ 0.4
HLA-DQB1-209ENST00000487676 ZSWIM6Q9HCJ5 1215 aa17.55■□□□□ 0.4
HLA-DQB1-209ENST00000487676 LZTFL1Q9NQ48 299 aa17.55■□□□□ 0.4
HLA-DQB1-209ENST00000487676 PLCH2O75038 1416 aa17.54■□□□□ 0.4
HLA-DQB1-209ENST00000487676 PI4KAP2A4QPH2 592 aa17.54■□□□□ 0.4
HLA-DQB1-209ENST00000487676 PI4KAP1Q8N8J0 262 aa17.54■□□□□ 0.4
HLA-DQB1-209ENST00000487676 TMEM51Q9NW97 253 aa17.54■□□□□ 0.4
HLA-DQB1-209ENST00000487676 TTC21BQ7Z4L5 1316 aa17.54■□□□□ 0.4
HLA-DQB1-209ENST00000487676 SLC27A2O14975 620 aa17.54■□□□□ 0.4
HLA-DQB1-209ENST00000487676 IBSPP21815 317 aaPredicted RBP17.54■□□□□ 0.4
HLA-DQB1-209ENST00000487676 IL13P35225 146 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 14.9 ms