RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 NUTM1Q86Y26 1132 aa15.93■□□□□ 0.14
TRIM56-204ENST00000487252 SUPT20HQ8NEM7 779 aa15.93■□□□□ 0.14
TRIM56-204ENST00000487252 IL17REQ8NFR9 667 aa15.93■□□□□ 0.14
TRIM56-204ENST00000487252 PITPNM2Q9BZ72 1349 aa15.93■□□□□ 0.14
TRIM56-204ENST00000487252 FKTNO75072 461 aa15.92■□□□□ 0.14
TRIM56-204ENST00000487252 EN2P19622 333 aaPredicted RBP15.92■□□□□ 0.14
TRIM56-204ENST00000487252 RBM17Q96I25 401 aaKnown RBP15.92■□□□□ 0.14
TRIM56-204ENST00000487252 NYXQ9GZU5 481 aa15.92■□□□□ 0.14
TRIM56-204ENST00000487252 IBTKQ9P2D0 1353 aaPredicted RBP15.91■□□□□ 0.14
TRIM56-204ENST00000487252 NBPF26B4DH59 902 aa15.91■□□□□ 0.14
TRIM56-204ENST00000487252 FKBP1BP68106 108 aa15.91■□□□□ 0.14
TRIM56-204ENST00000487252 NBPF10Q6P3W6 841 aaKnown RBP15.91■□□□□ 0.14
TRIM56-204ENST00000487252 DCPSQ96C86 337 aaKnown RBP15.91■□□□□ 0.14
TRIM56-204ENST00000487252 H0YGN5 161 aa15.9■□□□□ 0.14
TRIM56-204ENST00000487252 TCERG1O14776 1098 aaKnown RBP15.9■□□□□ 0.14
TRIM56-204ENST00000487252 KCNQ3O43525 872 aa15.9■□□□□ 0.14
TRIM56-204ENST00000487252 TEFQ10587 303 aa15.9■□□□□ 0.14
TRIM56-204ENST00000487252 ARMC5Q96C12 935 aa15.9■□□□□ 0.14
TRIM56-204ENST00000487252 R3HDMLQ9H3Y0 253 aa15.9■□□□□ 0.14
TRIM56-204ENST00000487252 NUP98P52948 1817 aa15.89■□□□□ 0.13
TRIM56-204ENST00000487252 CEMIPQ8WUJ3 1361 aa15.89■□□□□ 0.13
TRIM56-204ENST00000487252 LAMA3Q16787 3333 aa15.89■□□□□ 0.13
TRIM56-204ENST00000487252 PRAMEF22A3QJZ6 481 aa15.89■□□□□ 0.13
TRIM56-204ENST00000487252 TBC1D10BQ4KMP7 808 aaPredicted RBP15.89■□□□□ 0.13
TRIM56-204ENST00000487252 CDCA5Q96FF9 252 aa15.89■□□□□ 0.13
TRIM56-204ENST00000487252 ZBTB12Q9Y330 459 aaPredicted RBP15.89■□□□□ 0.13
TRIM56-204ENST00000487252 UNC80Q8N2C7 3258 aa15.88■□□□□ 0.13
TRIM56-204ENST00000487252 HMOX1P09601 288 aa15.88■□□□□ 0.13
TRIM56-204ENST00000487252 C3orf67Q6ZVT6 689 aa15.88■□□□□ 0.13
TRIM56-204ENST00000487252 OTOP1Q7RTM1 612 aa15.88■□□□□ 0.13
TRIM56-204ENST00000487252 DUOX1Q9NRD9 1551 aa15.87■□□□□ 0.13
TRIM56-204ENST00000487252 SULF1Q8IWU6 871 aa15.87■□□□□ 0.13
TRIM56-204ENST00000487252 RBM27Q9P2N5 1060 aaKnown RBP15.87■□□□□ 0.13
TRIM56-204ENST00000487252 PSMD14O00487 310 aa15.86■□□□□ 0.13
TRIM56-204ENST00000487252 RPS12P25398 132 aaKnown RBP15.86■□□□□ 0.13
TRIM56-204ENST00000487252 DPP8Q6V1X1 898 aaPredicted RBP15.86■□□□□ 0.13
TRIM56-204ENST00000487252 SP8Q8IXZ3 490 aa15.86■□□□□ 0.13
TRIM56-204ENST00000487252 PRO3102Q9H379 93 aa15.86■□□□□ 0.13
TRIM56-204ENST00000487252 ERVV-1B6SEH8 477 aa15.85■□□□□ 0.13
TRIM56-204ENST00000487252 SNRPA1P09661 255 aaKnown RBP15.85■□□□□ 0.13
TRIM56-204ENST00000487252 CHRDL2Q6WN34 429 aa15.85■□□□□ 0.13
TRIM56-204ENST00000487252 MPNDQ8N594 471 aa15.85■□□□□ 0.13
TRIM56-204ENST00000487252 TMX4Q9H1E5 349 aaPredicted RBP15.85■□□□□ 0.13
TRIM56-204ENST00000487252 GGA3Q9NZ52 723 aa15.85■□□□□ 0.13
TRIM56-204ENST00000487252 TRIM17Q9Y577 477 aa15.85■□□□□ 0.13
TRIM56-204ENST00000487252 UBN2Q6ZU65 1347 aa15.85■□□□□ 0.13
TRIM56-204ENST00000487252 GNAT3A8MTJ3 354 aa15.84■□□□□ 0.13
TRIM56-204ENST00000487252 PTPN22Q9Y2R2 807 aa15.84■□□□□ 0.13
TRIM56-204ENST00000487252 ABCC4O15439 1325 aa15.84■□□□□ 0.13
TRIM56-204ENST00000487252 ASTN2O75129 1339 aaPredicted RBP15.84■□□□□ 0.13
TRIM56-204ENST00000487252 KIF4BQ2VIQ3 1234 aa15.83■□□□□ 0.12
TRIM56-204ENST00000487252 KDM3BQ7LBC6 1761 aa15.82■□□□□ 0.12
TRIM56-204ENST00000487252 BTBD11A6QL63 1104 aa15.82■□□□□ 0.12
TRIM56-204ENST00000487252 BBOX1O75936 387 aa15.82■□□□□ 0.12
TRIM56-204ENST00000487252 NTSR2O95665 410 aa15.82■□□□□ 0.12
TRIM56-204ENST00000487252 RBM26Q5T8P6 1007 aaKnown RBP15.82■□□□□ 0.12
TRIM56-204ENST00000487252 SUSD4Q5VX71 490 aa15.82■□□□□ 0.12
TRIM56-204ENST00000487252 MOB2Q70IA6 237 aa15.82■□□□□ 0.12
TRIM56-204ENST00000487252 MORC1Q86VD1 984 aa15.82■□□□□ 0.12
TRIM56-204ENST00000487252 LRRC37AA6NMS7 1700 aa15.82■□□□□ 0.12
TRIM56-204ENST00000487252 SREBF2Q12772 1141 aa15.81■□□□□ 0.12
TRIM56-204ENST00000487252 ANKRD36CQ5JPF3 1778 aa15.81■□□□□ 0.12
TRIM56-204ENST00000487252 SLC10A5Q5PT55 438 aa15.81■□□□□ 0.12
TRIM56-204ENST00000487252 RTL9Q8NET4 1388 aa15.81■□□□□ 0.12
TRIM56-204ENST00000487252 LAMB1P07942 1786 aa15.8■□□□□ 0.12
TRIM56-204ENST00000487252 ZNF609O15014 1411 aa15.8■□□□□ 0.12
TRIM56-204ENST00000487252 ZNF34Q8IZ26 560 aa15.8■□□□□ 0.12
TRIM56-204ENST00000487252 LAMB2P55268 1798 aa15.8■□□□□ 0.12
TRIM56-204ENST00000487252 DDX60Q8IY21 1712 aaKnown RBP15.8■□□□□ 0.12
TRIM56-204ENST00000487252 MAP3K15Q6ZN16 1313 aa15.79■□□□□ 0.12
TRIM56-204ENST00000487252 UBE2Q2LH0YL09 131 aa15.79■□□□□ 0.12
TRIM56-204ENST00000487252 ALDH1A1P00352 501 aa15.79■□□□□ 0.12
TRIM56-204ENST00000487252 ZNF333Q96JL9 665 aa15.79■□□□□ 0.12
TRIM56-204ENST00000487252 NLRP3Q96P20 1036 aa15.79■□□□□ 0.12
TRIM56-204ENST00000487252 GAS2L2Q8NHY3 880 aa15.78■□□□□ 0.12
TRIM56-204ENST00000487252 TMEM106CQ9BVX2 250 aa15.78■□□□□ 0.12
TRIM56-204ENST00000487252 KCNQ5Q9NR82 932 aa15.78■□□□□ 0.12
TRIM56-204ENST00000487252 SCN9AQ15858 1988 aa15.78■□□□□ 0.12
TRIM56-204ENST00000487252 LAMB4A4D0S4 1761 aa15.77■□□□□ 0.12
TRIM56-204ENST00000487252 GPTP24298 496 aa15.77■□□□□ 0.12
TRIM56-204ENST00000487252 ZNF280AP59817 542 aaPredicted RBP15.77■□□□□ 0.12
TRIM56-204ENST00000487252 ANGEL2Q5VTE6 544 aaKnown RBP15.77■□□□□ 0.12
TRIM56-204ENST00000487252 COL25A1Q9BXS0 654 aaPredicted RBP15.77■□□□□ 0.12
TRIM56-204ENST00000487252 PANK3Q9H999 370 aa15.77■□□□□ 0.12
TRIM56-204ENST00000487252 VCANP13611 3396 aa15.77■□□□□ 0.11
TRIM56-204ENST00000487252 VIL1P09327 827 aaKnown RBP15.76■□□□□ 0.11
TRIM56-204ENST00000487252 ZEB1P37275 1124 aaPredicted RBP15.76■□□□□ 0.11
TRIM56-204ENST00000487252 SCARF1Q14162 830 aa15.76■□□□□ 0.11
TRIM56-204ENST00000487252 DBNDD1Q9H9R9 158 aa15.76■□□□□ 0.11
TRIM56-204ENST00000487252 CAP1Q01518 475 aa15.75■□□□□ 0.11
TRIM56-204ENST00000487252 WASHC4Q2M389 1173 aa15.75■□□□□ 0.11
TRIM56-204ENST00000487252 NECTIN2Q92692 538 aa15.75■□□□□ 0.11
TRIM56-204ENST00000487252 ERO1AQ96HE7 468 aa15.75■□□□□ 0.11
TRIM56-204ENST00000487252 TAF1P21675 1872 aa15.75■□□□□ 0.11
TRIM56-204ENST00000487252 A0A1W2PPC1 479 aa15.74■□□□□ 0.11
TRIM56-204ENST00000487252 SOX1O00570 391 aaPredicted RBP15.74■□□□□ 0.11
TRIM56-204ENST00000487252 MKRN3Q13064 507 aaKnown RBP15.74■□□□□ 0.11
TRIM56-204ENST00000487252 TTLL7Q6ZT98 887 aa15.74■□□□□ 0.11
TRIM56-204ENST00000487252 ECE2O60344 883 aa15.73■□□□□ 0.11
TRIM56-204ENST00000487252 DIAPH1O60610 1272 aaKnown RBP15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms