RNA–Protein interactions for RNA: ENST00000487211.5

RTFDC1-209, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 411 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-209ENST00000487211 PKDCCQ504Y2 493 aa9.26□□□□□ -0.93
RTFDC1-209ENST00000487211 FOXD4L5Q5VV16 416 aaPredicted RBP9.26□□□□□ -0.93
RTFDC1-209ENST00000487211 ZNF295-AS1Q8N0V1 137 aa9.26□□□□□ -0.93
RTFDC1-209ENST00000487211 INO80Q9ULG1 1556 aaPredicted RBP9.25□□□□□ -0.93
RTFDC1-209ENST00000487211 NCOA1Q15788 1441 aa9.25□□□□□ -0.93
RTFDC1-209ENST00000487211 SCARF1Q14162 830 aa9.25□□□□□ -0.93
RTFDC1-209ENST00000487211 DGAT1O75907 488 aa9.24□□□□□ -0.93
RTFDC1-209ENST00000487211 BMP1P13497 986 aa9.24□□□□□ -0.93
RTFDC1-209ENST00000487211 PLA2G4AP47712 749 aa9.24□□□□□ -0.93
RTFDC1-209ENST00000487211 C4orf17Q53FE4 359 aa9.24□□□□□ -0.93
RTFDC1-209ENST00000487211 COX20Q5RI15 118 aa9.24□□□□□ -0.93
RTFDC1-209ENST00000487211 ALDH16A1Q8IZ83 802 aa9.24□□□□□ -0.93
RTFDC1-209ENST00000487211 RGS22Q8NE09 1264 aa9.24□□□□□ -0.93
RTFDC1-209ENST00000487211 QTRT2Q9H974 415 aaKnown RBP9.24□□□□□ -0.93
RTFDC1-209ENST00000487211 ANKRD30AQ9BXX3 1397 aa9.24□□□□□ -0.93
RTFDC1-209ENST00000487211 KIF15Q9NS87 1388 aa9.24□□□□□ -0.93
RTFDC1-209ENST00000487211 DNMT1P26358 1616 aaKnown RBP9.23□□□□□ -0.93
RTFDC1-209ENST00000487211 AGLP35573 1532 aa9.23□□□□□ -0.93
RTFDC1-209ENST00000487211 NRG2O14511 850 aaPredicted RBP9.23□□□□□ -0.93
RTFDC1-209ENST00000487211 PHKA2P46019 1235 aa9.23□□□□□ -0.93
RTFDC1-209ENST00000487211 CEBPAP49715 358 aaPredicted RBP9.23□□□□□ -0.93
RTFDC1-209ENST00000487211 HIRAP54198 1017 aaPredicted RBP9.23□□□□□ -0.93
RTFDC1-209ENST00000487211 CTC1Q2NKJ3 1217 aa9.23□□□□□ -0.93
RTFDC1-209ENST00000487211 PRICKLE2Q7Z3G6 844 aa9.23□□□□□ -0.93
RTFDC1-209ENST00000487211 PHACTR1Q9C0D0 580 aa9.23□□□□□ -0.93
RTFDC1-209ENST00000487211 MAST1Q9Y2H9 1570 aa9.23□□□□□ -0.93
RTFDC1-209ENST00000487211 SHANK2Q9UPX8 1470 aa9.22□□□□□ -0.93
RTFDC1-209ENST00000487211 REREQ9P2R6 1566 aa9.22□□□□□ -0.93
RTFDC1-209ENST00000487211 POU4F2Q12837 409 aa9.22□□□□□ -0.93
RTFDC1-209ENST00000487211 RNF217Q8TC41 542 aa9.22□□□□□ -0.93
RTFDC1-209ENST00000487211 SETD1BQ9UPS6 1966 aaKnown RBP9.22□□□□□ -0.93
RTFDC1-209ENST00000487211 TTLL8A6PVC2 850 aa9.21□□□□□ -0.94
RTFDC1-209ENST00000487211 AXIN1O15169 862 aa9.21□□□□□ -0.94
RTFDC1-209ENST00000487211 SMCPP49901 116 aaPredicted RBP9.21□□□□□ -0.94
RTFDC1-209ENST00000487211 MARSP56192 900 aaKnown RBP9.21□□□□□ -0.94
RTFDC1-209ENST00000487211 TRIM46Q7Z4K8 759 aa9.21□□□□□ -0.94
RTFDC1-209ENST00000487211 AIDAQ96BJ3 306 aa9.21□□□□□ -0.94
RTFDC1-209ENST00000487211 MYO19Q96H55 970 aa9.21□□□□□ -0.94
RTFDC1-209ENST00000487211 LRFN2Q9ULH4 789 aa9.21□□□□□ -0.94
RTFDC1-209ENST00000487211 CEP350Q5VT06 3117 aa9.21□□□□□ -0.94
RTFDC1-209ENST00000487211 ADGRL2O95490 1459 aa9.21□□□□□ -0.94
RTFDC1-209ENST00000487211 PLXNC1O60486 1568 aa9.2□□□□□ -0.94
RTFDC1-209ENST00000487211 SPATA31C2B4DYI2 1134 aa9.2□□□□□ -0.94
RTFDC1-209ENST00000487211 TNFRSF10BO14763 440 aa9.2□□□□□ -0.94
RTFDC1-209ENST00000487211 FAM13AO94988 1023 aa9.2□□□□□ -0.94
RTFDC1-209ENST00000487211 MPSTP25325 297 aa9.2□□□□□ -0.94
RTFDC1-209ENST00000487211 TXLNAP40222 546 aa9.2□□□□□ -0.94
RTFDC1-209ENST00000487211 RTN1Q16799 776 aa9.2□□□□□ -0.94
RTFDC1-209ENST00000487211 LYSMD3Q7Z3D4 306 aa9.2□□□□□ -0.94
RTFDC1-209ENST00000487211 FOXD4L4Q8WXT5 416 aaPredicted RBP9.2□□□□□ -0.94
RTFDC1-209ENST00000487211 STIM2Q9P246 746 aa9.2□□□□□ -0.94
RTFDC1-209ENST00000487211 ROCK1Q13464 1354 aa9.2□□□□□ -0.94
RTFDC1-209ENST00000487211 FIGNL2A6NMB9 653 aa9.19□□□□□ -0.94
RTFDC1-209ENST00000487211 DGKZQ13574 1117 aa9.19□□□□□ -0.94
RTFDC1-209ENST00000487211 ECM1Q16610 540 aa9.19□□□□□ -0.94
RTFDC1-209ENST00000487211 NBPF1Q3BBV0 1214 aa9.19□□□□□ -0.94
RTFDC1-209ENST00000487211 C1orf53Q5VUE5 145 aa9.19□□□□□ -0.94
RTFDC1-209ENST00000487211 NBPF10Q6P3W6 841 aaKnown RBP9.19□□□□□ -0.94
RTFDC1-209ENST00000487211 WASHC2CQ9Y4E1 1318 aa9.19□□□□□ -0.94
RTFDC1-209ENST00000487211 ZMYM3Q14202 1370 aa9.19□□□□□ -0.94
RTFDC1-209ENST00000487211 UHRF1BP1Q6BDS2 1440 aa9.19□□□□□ -0.94
RTFDC1-209ENST00000487211 RHOQP17081 205 aa9.18□□□□□ -0.94
RTFDC1-209ENST00000487211 NPR3P17342 541 aa9.18□□□□□ -0.94
RTFDC1-209ENST00000487211 BRD2P25440 801 aaKnown RBP9.18□□□□□ -0.94
RTFDC1-209ENST00000487211 ARHGAP4P98171 946 aa9.18□□□□□ -0.94
RTFDC1-209ENST00000487211 SOS2Q07890 1332 aaPredicted RBP9.18□□□□□ -0.94
RTFDC1-209ENST00000487211 C11orf91Q3C1V1 193 aa9.18□□□□□ -0.94
RTFDC1-209ENST00000487211 ADGBQ8N7X0 1667 aa9.18□□□□□ -0.94
RTFDC1-209ENST00000487211 ZFP42Q96MM3 310 aa9.18□□□□□ -0.94
RTFDC1-209ENST00000487211 DUOX2Q9NRD8 1548 aa9.18□□□□□ -0.94
RTFDC1-209ENST00000487211 KLK14Q9P0G3 267 aa9.18□□□□□ -0.94
RTFDC1-209ENST00000487211 ANKRD50Q9ULJ7 1429 aa9.18□□□□□ -0.94
RTFDC1-209ENST00000487211 CROCC2H7BZ55 1655 aa9.17□□□□□ -0.94
RTFDC1-209ENST00000487211 TATP17735 454 aaPredicted RBP9.17□□□□□ -0.94
RTFDC1-209ENST00000487211 MAPK1P28482 360 aa9.17□□□□□ -0.94
RTFDC1-209ENST00000487211 AAMPQ13685 434 aa9.17□□□□□ -0.94
RTFDC1-209ENST00000487211 NOM1Q5C9Z4 860 aaKnown RBP9.17□□□□□ -0.94
RTFDC1-209ENST00000487211 ABTB2Q8N961 1025 aa9.17□□□□□ -0.94
RTFDC1-209ENST00000487211 RHPN1Q8TCX5 695 aa9.17□□□□□ -0.94
RTFDC1-209ENST00000487211 DCTN4Q9UJW0 460 aa9.17□□□□□ -0.94
RTFDC1-209ENST00000487211 ERBINQ96RT1 1412 aa9.16□□□□□ -0.94
RTFDC1-209ENST00000487211 EIF1AXP47813 144 aaKnown RBP9.16□□□□□ -0.94
RTFDC1-209ENST00000487211 LAPTM4AQ15012 233 aa9.16□□□□□ -0.94
RTFDC1-209ENST00000487211 WDR44Q5JSH3 913 aa9.16□□□□□ -0.94
RTFDC1-209ENST00000487211 CRIPAKQ8N1N5 446 aa9.16□□□□□ -0.94
RTFDC1-209ENST00000487211 TIMMDC1Q9NPL8 285 aa9.16□□□□□ -0.94
RTFDC1-209ENST00000487211 ZDHHC3Q9NYG2 299 aa9.16□□□□□ -0.94
RTFDC1-209ENST00000487211 LRP5O75197 1615 aa9.16□□□□□ -0.94
RTFDC1-209ENST00000487211 NAIPQ13075 1403 aa9.15□□□□□ -0.94
RTFDC1-209ENST00000487211 ST8SIA5O15466 376 aa9.15□□□□□ -0.94
RTFDC1-209ENST00000487211 ALKBH2Q6NS38 261 aa9.15□□□□□ -0.94
RTFDC1-209ENST00000487211 DNAJC14Q6Y2X3 702 aaPredicted RBP9.15□□□□□ -0.94
RTFDC1-209ENST00000487211 IFT43Q96FT9 208 aa9.15□□□□□ -0.94
RTFDC1-209ENST00000487211 ZBTB39O15060 712 aa9.14□□□□□ -0.95
RTFDC1-209ENST00000487211 FAM26DQ5JW98 314 aa9.14□□□□□ -0.95
RTFDC1-209ENST00000487211 BICDL1Q6ZP65 573 aa9.14□□□□□ -0.95
RTFDC1-209ENST00000487211 NPM2Q86SE8 214 aaKnown RBP9.14□□□□□ -0.95
RTFDC1-209ENST00000487211 AAASQ9NRG9 546 aa9.14□□□□□ -0.95
RTFDC1-209ENST00000487211 CNTLNQ9NXG0 1405 aa9.14□□□□□ -0.95
RTFDC1-209ENST00000487211 TOM1O60784 492 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms