RNA–Protein interactions for RNA: ENST00000486954.1

LINC00996-202, long intergenic non-protein coding RNA 996, humanhuman

TSL 4

Gene LINC00996, Length 572 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00996-202ENST00000486954 HOXA10P31260 410 aaPredicted RBP14.68□□□□□ -0.06
LINC00996-202ENST00000486954 SOGA3Q5TF21 947 aa14.68□□□□□ -0.06
LINC00996-202ENST00000486954 PRPF40BQ6NWY9 871 aaKnown RBP14.68□□□□□ -0.06
LINC00996-202ENST00000486954 ITPRIPQ8IWB1 547 aa14.68□□□□□ -0.06
LINC00996-202ENST00000486954 CRAMP1Q96RY5 1269 aa14.68□□□□□ -0.06
LINC00996-202ENST00000486954 CHMP3Q9Y3E7 222 aa14.68□□□□□ -0.06
LINC00996-202ENST00000486954 UTYO14607 1347 aa14.67□□□□□ -0.06
LINC00996-202ENST00000486954 GNAI3P08754 354 aa14.67□□□□□ -0.06
LINC00996-202ENST00000486954 CASP7P55210 303 aa14.67□□□□□ -0.06
LINC00996-202ENST00000486954 GRAPQ13588 217 aa14.67□□□□□ -0.06
LINC00996-202ENST00000486954 TMEM57Q8N5G2 664 aa14.67□□□□□ -0.06
LINC00996-202ENST00000486954 GRAPLQ8TC17 118 aaPredicted RBP14.67□□□□□ -0.06
LINC00996-202ENST00000486954 TNNQ9UQP3 1299 aa14.67□□□□□ -0.06
LINC00996-202ENST00000486954 PPEF1O14829 653 aaPredicted RBP14.66□□□□□ -0.06
LINC00996-202ENST00000486954 NBPF7P0C2Y1 421 aaPredicted RBP14.66□□□□□ -0.06
LINC00996-202ENST00000486954 YBX3P16989 372 aaKnown RBP eCLIP14.66□□□□□ -0.06
LINC00996-202ENST00000486954 CCDC85AQ96PX6 553 aaPredicted RBP14.66□□□□□ -0.06
LINC00996-202ENST00000486954 CDC5LQ99459 802 aaKnown RBP14.66□□□□□ -0.06
LINC00996-202ENST00000486954 RTL9Q8NET4 1388 aa14.65□□□□□ -0.06
LINC00996-202ENST00000486954 SLX4Q8IY92 1834 aa14.65□□□□□ -0.06
LINC00996-202ENST00000486954 TMC4Q7Z404 712 aa14.65□□□□□ -0.06
LINC00996-202ENST00000486954 TTLL11Q8NHH1 800 aa14.65□□□□□ -0.06
LINC00996-202ENST00000486954 SUCLG2Q96I99 432 aa14.65□□□□□ -0.06
LINC00996-202ENST00000486954 USP44Q9H0E7 712 aa14.65□□□□□ -0.06
LINC00996-202ENST00000486954 ZNF219Q9P2Y4 722 aaPredicted RBP14.65□□□□□ -0.06
LINC00996-202ENST00000486954 C21orf2O43822 256 aa14.64□□□□□ -0.07
LINC00996-202ENST00000486954 PLIN1O60240 522 aa14.64□□□□□ -0.07
LINC00996-202ENST00000486954 BBOX1O75936 387 aa14.64□□□□□ -0.07
LINC00996-202ENST00000486954 RRP1P56182 461 aaKnown RBP14.64□□□□□ -0.07
LINC00996-202ENST00000486954 FAM161AQ3B820 660 aa14.64□□□□□ -0.07
LINC00996-202ENST00000486954 CCDC93Q567U6 631 aa14.64□□□□□ -0.07
LINC00996-202ENST00000486954 TAF7LQ5H9L4 462 aa14.64□□□□□ -0.07
LINC00996-202ENST00000486954 CC2D2BQ6DHV5 1058 aa14.64□□□□□ -0.07
LINC00996-202ENST00000486954 ANKRD18AQ8IVF6 992 aa14.64□□□□□ -0.07
LINC00996-202ENST00000486954 MEIS3Q99687 375 aa14.64□□□□□ -0.07
LINC00996-202ENST00000486954 CHMP4BQ9H444 224 aaKnown RBP14.64□□□□□ -0.07
LINC00996-202ENST00000486954 ANKRD18BA2A2Z9 1011 aa14.63□□□□□ -0.07
LINC00996-202ENST00000486954 RLBP1P12271 317 aa14.63□□□□□ -0.07
LINC00996-202ENST00000486954 ITGA6P23229 1130 aa14.63□□□□□ -0.07
LINC00996-202ENST00000486954 IGHMBP2P38935 993 aaKnown RBP14.63□□□□□ -0.07
LINC00996-202ENST00000486954 IFIT5Q13325 482 aaKnown RBP14.63□□□□□ -0.07
LINC00996-202ENST00000486954 PDE3AQ14432 1141 aa14.63□□□□□ -0.07
LINC00996-202ENST00000486954 CCDC57Q2TAC2 916 aa14.63□□□□□ -0.07
LINC00996-202ENST00000486954 LMBR1LQ6UX01 489 aa14.63□□□□□ -0.07
LINC00996-202ENST00000486954 PANK1Q8TE04 598 aa14.63□□□□□ -0.07
LINC00996-202ENST00000486954 BICC1Q9H694 974 aaKnown RBP14.63□□□□□ -0.07
LINC00996-202ENST00000486954 GREM2Q9H772 168 aa14.63□□□□□ -0.07
LINC00996-202ENST00000486954 DDX19BQ9UMR2 479 aa14.63□□□□□ -0.07
LINC00996-202ENST00000486954 CSF1RP07333 972 aa14.62□□□□□ -0.07
LINC00996-202ENST00000486954 FOXO4P98177 505 aa14.62□□□□□ -0.07
LINC00996-202ENST00000486954 MVPQ14764 893 aaKnown RBP14.62□□□□□ -0.07
LINC00996-202ENST00000486954 GRIPAP1Q4V328 841 aa14.62□□□□□ -0.07
LINC00996-202ENST00000486954 ARHGAP27Q6ZUM4 889 aa14.62□□□□□ -0.07
LINC00996-202ENST00000486954 CELF1Q92879 486 aaKnown RBP14.62□□□□□ -0.07
LINC00996-202ENST00000486954 SEC31BQ9NQW1 1179 aa14.62□□□□□ -0.07
LINC00996-202ENST00000486954 GNAI2P04899 355 aa14.61□□□□□ -0.07
LINC00996-202ENST00000486954 RPS8P62241 208 aaKnown RBP14.61□□□□□ -0.07
LINC00996-202ENST00000486954 RTKN2Q8IZC4 609 aa14.61□□□□□ -0.07
LINC00996-202ENST00000486954 MPHOSPH8Q99549 860 aa14.61□□□□□ -0.07
LINC00996-202ENST00000486954 ATP6V0A2Q9Y487 856 aa14.61□□□□□ -0.07
LINC00996-202ENST00000486954 LRRFIP2Q9Y608 721 aaKnown RBP14.61□□□□□ -0.07
LINC00996-202ENST00000486954 SPEF2Q9C093 1822 aa14.6□□□□□ -0.07
LINC00996-202ENST00000486954 RABL6Q3YEC7 729 aaPredicted RBP14.6□□□□□ -0.07
LINC00996-202ENST00000486954 EPHA10Q5JZY3 1008 aa14.6□□□□□ -0.07
LINC00996-202ENST00000486954 SP8Q8IXZ3 490 aa14.6□□□□□ -0.07
LINC00996-202ENST00000486954 TAOK3Q9H2K8 898 aa14.6□□□□□ -0.07
LINC00996-202ENST00000486954 COG6Q9Y2V7 657 aa14.6□□□□□ -0.07
LINC00996-202ENST00000486954 TAF1P21675 1872 aa14.6□□□□□ -0.07
LINC00996-202ENST00000486954 LRRC37AA6NMS7 1700 aa14.6□□□□□ -0.07
LINC00996-202ENST00000486954 ANKRD44Q8N8A2 993 aa14.59□□□□□ -0.07
LINC00996-202ENST00000486954 KAZALD1Q96I82 304 aa14.59□□□□□ -0.07
LINC00996-202ENST00000486954 FER1L6Q2WGJ9 1857 aa14.59□□□□□ -0.07
LINC00996-202ENST00000486954 DPP8Q6V1X1 898 aaPredicted RBP14.58□□□□□ -0.08
LINC00996-202ENST00000486954 SUPT20HQ8NEM7 779 aa14.58□□□□□ -0.08
LINC00996-202ENST00000486954 C7orf43Q8WVR3 580 aa14.58□□□□□ -0.08
LINC00996-202ENST00000486954 LTBP3Q9NS15 1303 aa14.58□□□□□ -0.08
LINC00996-202ENST00000486954 FKBP4Q02790 459 aaKnown RBP eCLIP14.57□□□□□ -0.08
LINC00996-202ENST00000486954 RASSF7Q02833 373 aa14.57□□□□□ -0.08
LINC00996-202ENST00000486954 MPNDQ8N594 471 aa14.57□□□□□ -0.08
LINC00996-202ENST00000486954 CNNM1Q9NRU3 951 aa14.57□□□□□ -0.08
LINC00996-202ENST00000486954 BSDC1Q9NW68 430 aaPredicted RBP14.57□□□□□ -0.08
LINC00996-202ENST00000486954 CHD4Q14839 1912 aa14.56□□□□□ -0.08
LINC00996-202ENST00000486954 COL4A1P02462 1669 aa14.56□□□□□ -0.08
LINC00996-202ENST00000486954 ZBTB7BO15156 539 aaPredicted RBP14.56□□□□□ -0.08
LINC00996-202ENST00000486954 C20orf194Q5TEA3 1177 aa14.56□□□□□ -0.08
LINC00996-202ENST00000486954 OLFM4Q6UX06 510 aa14.56□□□□□ -0.08
LINC00996-202ENST00000486954 LDHAL6AQ6ZMR3 332 aa14.56□□□□□ -0.08
LINC00996-202ENST00000486954 PSMD1Q99460 953 aa14.56□□□□□ -0.08
LINC00996-202ENST00000486954 ANKIB1Q9P2G1 1089 aa14.56□□□□□ -0.08
LINC00996-202ENST00000486954 NSFL1CQ9UNZ2 370 aaKnown RBP14.56□□□□□ -0.08
LINC00996-202ENST00000486954 NFKBIEO00221 500 aa14.55□□□□□ -0.08
LINC00996-202ENST00000486954 SRGAP3O43295 1099 aa14.55□□□□□ -0.08
LINC00996-202ENST00000486954 CENPBP07199 599 aaPredicted RBP14.55□□□□□ -0.08
LINC00996-202ENST00000486954 LMNB1P20700 586 aa14.55□□□□□ -0.08
LINC00996-202ENST00000486954 C1orf115Q9H7X2 142 aa14.55□□□□□ -0.08
LINC00996-202ENST00000486954 SUPT16HQ9Y5B9 1047 aaKnown RBP14.55□□□□□ -0.08
LINC00996-202ENST00000486954 XDHP47989 1333 aa14.55□□□□□ -0.08
LINC00996-202ENST00000486954 MTX1Q13505 466 aa14.54□□□□□ -0.08
LINC00996-202ENST00000486954 ZNF594Q96JF6 807 aaPredicted RBP14.54□□□□□ -0.08
LINC00996-202ENST00000486954 EYA3Q99504 573 aa14.54□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms