RNA–Protein interactions for RNA: ENST00000486851.5

ELL3-205, Transcript of elongation factor for RNA polymerase II 3, human

TSL 2

Gene ELL3, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ELL3-205	ENST00000486851	ERBB4	Q15303	1308 aa		13.94	□□□□□ -0.18
ELL3-205	ENST00000486851	EGFR	P00533	1210 aa		13.93	□□□□□ -0.18
ELL3-205	ENST00000486851	U2AF1L5	P0DN76	240 aa	Predicted RBP	13.93	□□□□□ -0.18
ELL3-205	ENST00000486851	U2AF1	Q01081	240 aa	Known RBP eCLIP	13.93	□□□□□ -0.18
ELL3-205	ENST00000486851	NGEF	Q8N5V2	710 aa		13.93	□□□□□ -0.18
ELL3-205	ENST00000486851	TCERG1	O14776	1098 aa	Known RBP	13.92	□□□□□ -0.18
ELL3-205	ENST00000486851	NOG	Q13253	232 aa		13.92	□□□□□ -0.18
ELL3-205	ENST00000486851	DGKZ	Q13574	1117 aa		13.92	□□□□□ -0.18
ELL3-205	ENST00000486851	PROSER3	Q2NL68	480 aa		13.92	□□□□□ -0.18
ELL3-205	ENST00000486851	PARP10	Q53GL7	1025 aa		13.92	□□□□□ -0.18
ELL3-205	ENST00000486851	SP8	Q8IXZ3	490 aa		13.92	□□□□□ -0.18
ELL3-205	ENST00000486851	RRP7A	Q9Y3A4	280 aa	Known RBP	13.92	□□□□□ -0.18
ELL3-205	ENST00000486851	MYL6B	P14649	208 aa		13.91	□□□□□ -0.18
ELL3-205	ENST00000486851	KIF6	Q6ZMV9	814 aa		13.91	□□□□□ -0.18
ELL3-205	ENST00000486851	CDC37L1	Q7L3B6	337 aa		13.91	□□□□□ -0.18
ELL3-205	ENST00000486851	CFAP53	Q96M91	514 aa		13.91	□□□□□ -0.18
ELL3-205	ENST00000486851	THUMPD2	Q9BTF0	503 aa	Known RBP	13.91	□□□□□ -0.18
ELL3-205	ENST00000486851	BRCA2	P51587	3418 aa		13.91	□□□□□ -0.18
ELL3-205	ENST00000486851	BBOX1	O75936	387 aa		13.9	□□□□□ -0.18
ELL3-205	ENST00000486851	RAD17	O75943	681 aa		13.9	□□□□□ -0.18
ELL3-205	ENST00000486851	PNISR	Q8TF01	805 aa	Known RBP	13.9	□□□□□ -0.18
ELL3-205	ENST00000486851	NLRP3	Q96P20	1036 aa		13.9	□□□□□ -0.18
ELL3-205	ENST00000486851	SAGE1	Q9NXZ1	904 aa		13.9	□□□□□ -0.18
ELL3-205	ENST00000486851	CNOT7	Q9UIV1	285 aa	Known RBP	13.9	□□□□□ -0.18
ELL3-205	ENST00000486851	NUDC	Q9Y266	331 aa		13.9	□□□□□ -0.18
ELL3-205	ENST00000486851	RTL9	Q8NET4	1388 aa		13.9	□□□□□ -0.18
ELL3-205	ENST00000486851	AKAP11	Q9UKA4	1901 aa		13.9	□□□□□ -0.18
ELL3-205	ENST00000486851	CNGB1	Q14028	1251 aa	Predicted RBP	13.89	□□□□□ -0.19
ELL3-205	ENST00000486851	PPP1R42	Q7Z4L9	355 aa		13.89	□□□□□ -0.19
ELL3-205	ENST00000486851	NLRP10	Q86W26	655 aa		13.89	□□□□□ -0.19
ELL3-205	ENST00000486851	MICALL2	Q8IY33	904 aa		13.89	□□□□□ -0.19
ELL3-205	ENST00000486851	SUPT20H	Q8NEM7	779 aa		13.89	□□□□□ -0.19
ELL3-205	ENST00000486851	DPF2	Q92785	391 aa		13.89	□□□□□ -0.19
ELL3-205	ENST00000486851	PSME4	Q14997	1843 aa		13.89	□□□□□ -0.19
ELL3-205	ENST00000486851	ZNF609	O15014	1411 aa		13.89	□□□□□ -0.19
ELL3-205	ENST00000486851	ZNF646	O15015	1829 aa	Predicted RBP	13.88	□□□□□ -0.19
ELL3-205	ENST00000486851	HUNK	P57058	714 aa		13.88	□□□□□ -0.19
ELL3-205	ENST00000486851	DPP8	Q6V1X1	898 aa	Predicted RBP	13.88	□□□□□ -0.19
ELL3-205	ENST00000486851	USP48	Q86UV5	1035 aa		13.88	□□□□□ -0.19
ELL3-205	ENST00000486851	MPND	Q8N594	471 aa		13.88	□□□□□ -0.19
ELL3-205	ENST00000486851	UTP14A	Q9BVJ6	771 aa	Known RBP	13.88	□□□□□ -0.19
ELL3-205	ENST00000486851	ZBTB12	Q9Y330	459 aa	Predicted RBP	13.88	□□□□□ -0.19
ELL3-205	ENST00000486851	CENPF	P49454	3210 aa		13.88	□□□□□ -0.19
ELL3-205	ENST00000486851	ANXA1	P04083	346 aa		13.87	□□□□□ -0.19
ELL3-205	ENST00000486851	HCLS1	P14317	486 aa	Predicted RBP	13.87	□□□□□ -0.19
ELL3-205	ENST00000486851	GRAP	Q13588	217 aa		13.87	□□□□□ -0.19
ELL3-205	ENST00000486851	RGMB	Q6NW40	437 aa		13.87	□□□□□ -0.19
ELL3-205	ENST00000486851	SAMD7	Q7Z3H4	446 aa		13.87	□□□□□ -0.19
ELL3-205	ENST00000486851	GRAPL	Q8TC17	118 aa	Predicted RBP	13.87	□□□□□ -0.19
ELL3-205	ENST00000486851	ZNF408	Q9H9D4	720 aa		13.87	□□□□□ -0.19
ELL3-205	ENST00000486851	PSMD14	O00487	310 aa		13.86	□□□□□ -0.19
ELL3-205	ENST00000486851	SLC10A3	P09131	477 aa		13.86	□□□□□ -0.19
ELL3-205	ENST00000486851	TNIP1	Q15025	636 aa		13.86	□□□□□ -0.19
ELL3-205	ENST00000486851	NFE2L2	Q16236	605 aa		13.86	□□□□□ -0.19
ELL3-205	ENST00000486851	KCNQ5	Q9NR82	932 aa		13.86	□□□□□ -0.19
ELL3-205	ENST00000486851	RNF186	Q9NXI6	227 aa		13.86	□□□□□ -0.19
ELL3-205	ENST00000486851	ADM5	C9JUS6	153 aa		13.85	□□□□□ -0.19
ELL3-205	ENST00000486851	KIF23	Q02241	960 aa	Predicted RBP	13.85	□□□□□ -0.19
ELL3-205	ENST00000486851	CCER1	Q8TC90	406 aa	Predicted RBP	13.85	□□□□□ -0.19
ELL3-205	ENST00000486851	CSRNP1	Q96S65	589 aa		13.85	□□□□□ -0.19
ELL3-205	ENST00000486851	BCL2L13	Q9BXK5	485 aa		13.85	□□□□□ -0.19
ELL3-205	ENST00000486851	GBA2	Q9HCG7	927 aa	Predicted RBP	13.85	□□□□□ -0.19
ELL3-205	ENST00000486851	ASTN2	O75129	1339 aa	Predicted RBP	13.85	□□□□□ -0.19
ELL3-205	ENST00000486851	SOX10	P56693	466 aa		13.84	□□□□□ -0.19
ELL3-205	ENST00000486851	KRT26	Q7Z3Y9	468 aa		13.84	□□□□□ -0.19
ELL3-205	ENST00000486851	POLL	Q9UGP5	575 aa		13.84	□□□□□ -0.19
ELL3-205	ENST00000486851	PAPPA2	Q9BXP8	1791 aa		13.83	□□□□□ -0.19
ELL3-205	ENST00000486851		H7C1D1	291 aa		13.83	□□□□□ -0.2
ELL3-205	ENST00000486851	TCIRG1	Q13488	830 aa		13.83	□□□□□ -0.2
ELL3-205	ENST00000486851	SF3B3	Q15393	1217 aa	Known RBP	13.83	□□□□□ -0.2
ELL3-205	ENST00000486851	TBC1D10B	Q4KMP7	808 aa	Predicted RBP	13.83	□□□□□ -0.2
ELL3-205	ENST00000486851	PRPF38B	Q5VTL8	546 aa	Known RBP	13.83	□□□□□ -0.2
ELL3-205	ENST00000486851	TMC4	Q7Z404	712 aa		13.83	□□□□□ -0.2
ELL3-205	ENST00000486851	CELF1	Q92879	486 aa	Known RBP	13.83	□□□□□ -0.2
ELL3-205	ENST00000486851	SH3TC1	Q8TE82	1336 aa		13.83	□□□□□ -0.2
ELL3-205	ENST00000486851	RPS12	P25398	132 aa	Known RBP	13.82	□□□□□ -0.2
ELL3-205	ENST00000486851	COPS6	Q7L5N1	327 aa		13.82	□□□□□ -0.2
ELL3-205	ENST00000486851	RASAL3	Q86YV0	1011 aa		13.82	□□□□□ -0.2
ELL3-205	ENST00000486851	CCDC102A	Q96A19	550 aa		13.82	□□□□□ -0.2
ELL3-205	ENST00000486851	DBNDD1	Q9H9R9	158 aa		13.82	□□□□□ -0.2
ELL3-205	ENST00000486851	TRPA1	O75762	1119 aa		13.81	□□□□□ -0.2
ELL3-205	ENST00000486851	VIL1	P09327	827 aa	Known RBP	13.81	□□□□□ -0.2
ELL3-205	ENST00000486851	DDX46	Q7L014	1031 aa	Known RBP	13.81	□□□□□ -0.2
ELL3-205	ENST00000486851	XAGE3	Q8WTP9	111 aa		13.81	□□□□□ -0.2
ELL3-205	ENST00000486851	CFAP44	Q96MT7	982 aa		13.81	□□□□□ -0.2
ELL3-205	ENST00000486851	GML	Q99445	158 aa		13.81	□□□□□ -0.2
ELL3-205	ENST00000486851	ISCA1	Q9BUE6	129 aa		13.81	□□□□□ -0.2
ELL3-205	ENST00000486851	BABAM1	Q9NWV8	329 aa		13.81	□□□□□ -0.2
ELL3-205	ENST00000486851	ZNF280A	P59817	542 aa	Predicted RBP	13.8	□□□□□ -0.2
ELL3-205	ENST00000486851	GPSM2	P81274	684 aa		13.8	□□□□□ -0.2
ELL3-205	ENST00000486851	WASHC4	Q2M389	1173 aa		13.8	□□□□□ -0.2
ELL3-205	ENST00000486851	HSP90AB3P	Q58FF7	597 aa		13.8	□□□□□ -0.2
ELL3-205	ENST00000486851	CTU1	Q7Z7A3	348 aa	Known RBP	13.8	□□□□□ -0.2
ELL3-205	ENST00000486851	LAMB1	P07942	1786 aa		13.8	□□□□□ -0.2
ELL3-205	ENST00000486851	ECE2	O60344	883 aa		13.79	□□□□□ -0.2
ELL3-205	ENST00000486851	ZNF157	P51786	506 aa	Predicted RBP	13.79	□□□□□ -0.2
ELL3-205	ENST00000486851	KRT24	Q2M2I5	525 aa		13.79	□□□□□ -0.2
ELL3-205	ENST00000486851	KIF4B	Q2VIQ3	1234 aa		13.79	□□□□□ -0.2
ELL3-205	ENST00000486851	CDCA5	Q96FF9	252 aa		13.79	□□□□□ -0.2
ELL3-205	ENST00000486851	GGA3	Q9NZ52	723 aa		13.79	□□□□□ -0.2

Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms