RNA–Protein interactions for RNA: ENST00000486711.1

SMC4-218, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 621 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-218ENST00000486711 DHX32Q7L7V1 743 aaKnown RBP8.82□□□□□ -1
SMC4-218ENST00000486711 IFT43Q96FT9 208 aa8.82□□□□□ -1
SMC4-218ENST00000486711 TPSG1Q9NRR2 321 aa8.82□□□□□ -1
SMC4-218ENST00000486711 FRRS1LQ9P0K9 344 aa8.82□□□□□ -1
SMC4-218ENST00000486711 ZFATQ9P243 1243 aa8.82□□□□□ -1
SMC4-218ENST00000486711 CPB1P15086 417 aa8.81□□□□□ -1
SMC4-218ENST00000486711 FKBP5Q13451 457 aaPredicted RBP8.81□□□□□ -1
SMC4-218ENST00000486711 RSPO4Q2I0M5 234 aaPredicted RBP8.81□□□□□ -1
SMC4-218ENST00000486711 XP32Q5T750 250 aa8.81□□□□□ -1
SMC4-218ENST00000486711 TRPM4Q8TD43 1214 aa8.81□□□□□ -1
SMC4-218ENST00000486711 LRFN2Q9ULH4 789 aa8.81□□□□□ -1
SMC4-218ENST00000486711 SASH3O75995 380 aa8.8□□□□□ -1
SMC4-218ENST00000486711 TARSP26639 723 aaKnown RBP8.8□□□□□ -1
SMC4-218ENST00000486711 GPLD1P80108 840 aa8.8□□□□□ -1
SMC4-218ENST00000486711 NRG1Q02297 640 aaPredicted RBP8.8□□□□□ -1
SMC4-218ENST00000486711 RTCBQ9Y3I0 505 aaKnown RBP8.8□□□□□ -1
SMC4-218ENST00000486711 OPLAHO14841 1288 aa8.79□□□□□ -1
SMC4-218ENST00000486711 EGFRP00533 1210 aa8.79□□□□□ -1
SMC4-218ENST00000486711 ADGRE1Q14246 886 aa8.79□□□□□ -1
SMC4-218ENST00000486711 NKAPLQ5M9Q1 402 aa8.79□□□□□ -1
SMC4-218ENST00000486711 ELMSAN1Q6PJG2 1045 aa8.79□□□□□ -1
SMC4-218ENST00000486711 TREML1Q86YW5 311 aa8.79□□□□□ -1
SMC4-218ENST00000486711 DMRTC2Q8IXT2 367 aaPredicted RBP8.79□□□□□ -1
SMC4-218ENST00000486711 FMR1NBQ8N0W7 255 aaPredicted RBP8.79□□□□□ -1
SMC4-218ENST00000486711 PRIMPOLQ96LW4 560 aa8.79□□□□□ -1
SMC4-218ENST00000486711 LPIN3Q9BQK8 851 aa8.79□□□□□ -1
SMC4-218ENST00000486711 ZMIZ1Q9ULJ6 1067 aa8.79□□□□□ -1
SMC4-218ENST00000486711 ZBTB42B2RXF5 422 aa8.78□□□□□ -1
SMC4-218ENST00000486711 PRMT3O60678 531 aa8.78□□□□□ -1
SMC4-218ENST00000486711 SELPP16109 830 aa8.78□□□□□ -1
SMC4-218ENST00000486711 ITGB7P26010 798 aa8.78□□□□□ -1
SMC4-218ENST00000486711 NRLP54845 237 aa8.78□□□□□ -1
SMC4-218ENST00000486711 MBTPS1Q14703 1052 aa8.78□□□□□ -1
SMC4-218ENST00000486711 COX20Q5RI15 118 aa8.78□□□□□ -1
SMC4-218ENST00000486711 PERM1Q5SV97 790 aa8.78□□□□□ -1
SMC4-218ENST00000486711 MSL1Q68DK7 614 aa8.78□□□□□ -1
SMC4-218ENST00000486711 Q8N3U1 123 aa8.78□□□□□ -1
SMC4-218ENST00000486711 DTWD1Q8N5C7 304 aa8.78□□□□□ -1
SMC4-218ENST00000486711 LENG1Q96BZ8 264 aaPredicted RBP8.78□□□□□ -1
SMC4-218ENST00000486711 XYLBO75191 536 aa8.77□□□□□ -1.01
SMC4-218ENST00000486711 MLLT1Q03111 559 aaPredicted RBP8.77□□□□□ -1.01
SMC4-218ENST00000486711 OCLNQ16625 522 aa8.77□□□□□ -1.01
SMC4-218ENST00000486711 ILDR2Q71H61 639 aa8.77□□□□□ -1.01
SMC4-218ENST00000486711 TXNRD3Q86VQ6 643 aa8.77□□□□□ -1.01
SMC4-218ENST00000486711 RGL4Q8IZJ4 473 aa8.77□□□□□ -1.01
SMC4-218ENST00000486711 CMTR1Q8N1G2 835 aaKnown RBP8.77□□□□□ -1.01
SMC4-218ENST00000486711 TTC9Q92623 222 aa8.77□□□□□ -1.01
SMC4-218ENST00000486711 COL26A1Q96A83 441 aa8.77□□□□□ -1.01
SMC4-218ENST00000486711 DYRK3O43781 588 aa8.76□□□□□ -1.01
SMC4-218ENST00000486711 GRIK5Q16478 980 aa8.76□□□□□ -1.01
SMC4-218ENST00000486711 STK32AQ8WU08 396 aa8.76□□□□□ -1.01
SMC4-218ENST00000486711 TLR7Q9NYK1 1049 aaKnown RBP8.76□□□□□ -1.01
SMC4-218ENST00000486711 USP20Q9Y2K6 914 aa8.76□□□□□ -1.01
SMC4-218ENST00000486711 BRD2P25440 801 aaKnown RBP8.75□□□□□ -1.01
SMC4-218ENST00000486711 FAM69CQ0P6D2 419 aa8.75□□□□□ -1.01
SMC4-218ENST00000486711 C16orf46Q6P387 395 aa8.75□□□□□ -1.01
SMC4-218ENST00000486711 SHISA2Q6UWI4 295 aa8.75□□□□□ -1.01
SMC4-218ENST00000486711 WFDC8Q8IUA0 241 aa8.75□□□□□ -1.01
SMC4-218ENST00000486711 USP21Q9UK80 565 aa8.75□□□□□ -1.01
SMC4-218ENST00000486711 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP8.74□□□□□ -1.01
SMC4-218ENST00000486711 ATG7O95352 703 aa8.74□□□□□ -1.01
SMC4-218ENST00000486711 PSAPP07602 524 aa8.74□□□□□ -1.01
SMC4-218ENST00000486711 EIF2AK2P19525 551 aaKnown RBP8.74□□□□□ -1.01
SMC4-218ENST00000486711 PLAURQ03405 335 aa8.74□□□□□ -1.01
SMC4-218ENST00000486711 ZMYM1Q5SVZ6 1142 aa8.74□□□□□ -1.01
SMC4-218ENST00000486711 SMG9Q9H0W8 520 aaKnown RBP8.74□□□□□ -1.01
SMC4-218ENST00000486711 CXXC1Q9P0U4 656 aaPredicted RBP8.74□□□□□ -1.01
SMC4-218ENST00000486711 KCNMB2Q9Y691 235 aa8.74□□□□□ -1.01
SMC4-218ENST00000486711 SRPK2P78362 688 aaKnown RBP8.73□□□□□ -1.01
SMC4-218ENST00000486711 HFE2Q6ZVN8 426 aa8.73□□□□□ -1.01
SMC4-218ENST00000486711 FBXO11Q86XK2 927 aa8.73□□□□□ -1.01
SMC4-218ENST00000486711 ETFBKMTQ8IXQ9 262 aa8.73□□□□□ -1.01
SMC4-218ENST00000486711 FAM13BQ9NYF5 915 aa8.73□□□□□ -1.01
SMC4-218ENST00000486711 PTCD1O75127 700 aaKnown RBP8.72□□□□□ -1.01
SMC4-218ENST00000486711 H2AFB1P0C5Y9 115 aa8.72□□□□□ -1.01
SMC4-218ENST00000486711 H2AFB2P0C5Z0 115 aa8.72□□□□□ -1.01
SMC4-218ENST00000486711 SOX18P35713 384 aa8.72□□□□□ -1.01
SMC4-218ENST00000486711 SAP130Q9H0E3 1048 aa8.72□□□□□ -1.01
SMC4-218ENST00000486711 MMP20O60882 483 aa8.71□□□□□ -1.02
SMC4-218ENST00000486711 GHRHP01286 108 aa8.71□□□□□ -1.02
SMC4-218ENST00000486711 HOXD8P13378 290 aaPredicted RBP8.71□□□□□ -1.02
SMC4-218ENST00000486711 TMEM164Q5U3C3 297 aa8.71□□□□□ -1.02
SMC4-218ENST00000486711 HOMEZQ8IX15 550 aa8.71□□□□□ -1.02
SMC4-218ENST00000486711 MKNK1Q9BUB5 465 aa8.71□□□□□ -1.02
SMC4-218ENST00000486711 RBSNQ9H1K0 784 aa8.71□□□□□ -1.02
SMC4-218ENST00000486711 LOC102724428A0A0B4J2F2 783 aa8.7□□□□□ -1.02
SMC4-218ENST00000486711 SIK1P57059 783 aa8.7□□□□□ -1.02
SMC4-218ENST00000486711 NLRP13Q86W25 1043 aa8.7□□□□□ -1.02
SMC4-218ENST00000486711 PLD4Q96BZ4 506 aa8.7□□□□□ -1.02
SMC4-218ENST00000486711 TNFRSF10BO14763 440 aa8.69□□□□□ -1.02
SMC4-218ENST00000486711 PIK3R5Q8WYR1 880 aa8.69□□□□□ -1.02
SMC4-218ENST00000486711 CLP1Q92989 425 aaKnown RBP8.69□□□□□ -1.02
SMC4-218ENST00000486711 TP53INP1Q96A56 240 aa8.69□□□□□ -1.02
SMC4-218ENST00000486711 PBXIP1Q96AQ6 731 aa8.69□□□□□ -1.02
SMC4-218ENST00000486711 CCDC97Q96F63 343 aaPredicted RBP8.69□□□□□ -1.02
SMC4-218ENST00000486711 NSUN5Q96P11 429 aaKnown RBP8.69□□□□□ -1.02
SMC4-218ENST00000486711 J3QW42 95 aa8.68□□□□□ -1.02
SMC4-218ENST00000486711 TRIP4Q15650 581 aaPredicted RBP8.68□□□□□ -1.02
SMC4-218ENST00000486711 PRSS36Q5K4E3 855 aa8.68□□□□□ -1.02
SMC4-218ENST00000486711 IGF2-ASQ6U949 168 aa8.68□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms