RNA–Protein interactions for RNA: ENST00000486441.1

SDCCAG3-211, Transcript of Serologically defined colon cancer antigen 3, humanhuman

TSL 5

Gene SDCCAG3, Length 570 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCCAG3-211ENST00000486441 RAD17O75943 681 aa18.8■□□□□ 0.6
SDCCAG3-211ENST00000486441 NEFMP07197 916 aa18.8■□□□□ 0.6
SDCCAG3-211ENST00000486441 RIPK4P57078 832 aa18.8■□□□□ 0.6
SDCCAG3-211ENST00000486441 GRM1Q13255 1194 aa18.8■□□□□ 0.6
SDCCAG3-211ENST00000486441 TCIRG1Q13488 830 aa18.8■□□□□ 0.6
SDCCAG3-211ENST00000486441 KRT24Q2M2I5 525 aa18.8■□□□□ 0.6
SDCCAG3-211ENST00000486441 CIAPIN1Q6FI81 312 aa18.8■□□□□ 0.6
SDCCAG3-211ENST00000486441 DPP8Q6V1X1 898 aaPredicted RBP18.8■□□□□ 0.6
SDCCAG3-211ENST00000486441 XAGE3Q8WTP9 111 aa18.8■□□□□ 0.6
SDCCAG3-211ENST00000486441 BABAM1Q9NWV8 329 aa18.8■□□□□ 0.6
SDCCAG3-211ENST00000486441 LAMB2P55268 1798 aa18.79■□□□□ 0.6
SDCCAG3-211ENST00000486441 FAM161AQ3B820 660 aa18.79■□□□□ 0.6
SDCCAG3-211ENST00000486441 PAXIP1Q6ZW49 1069 aaPredicted RBP18.79■□□□□ 0.6
SDCCAG3-211ENST00000486441 SUPT20HQ8NEM7 779 aa18.79■□□□□ 0.6
SDCCAG3-211ENST00000486441 ZC3H15Q8WU90 426 aaKnown RBP18.79■□□□□ 0.6
SDCCAG3-211ENST00000486441 HHIPL1Q96JK4 782 aa18.79■□□□□ 0.6
SDCCAG3-211ENST00000486441 DUOX1Q9NRD9 1551 aa18.79■□□□□ 0.6
SDCCAG3-211ENST00000486441 GRAPQ13588 217 aa18.78■□□□□ 0.6
SDCCAG3-211ENST00000486441 GRAPLQ8TC17 118 aaPredicted RBP18.78■□□□□ 0.6
SDCCAG3-211ENST00000486441 NECTIN2Q92692 538 aa18.78■□□□□ 0.6
SDCCAG3-211ENST00000486441 CNOT7Q9UIV1 285 aaKnown RBP18.78■□□□□ 0.6
SDCCAG3-211ENST00000486441 CDHR2Q9BYE9 1310 aa18.77■□□□□ 0.6
SDCCAG3-211ENST00000486441 COL4A1P02462 1669 aa18.77■□□□□ 0.6
SDCCAG3-211ENST00000486441 TMPOP42166 694 aaKnown RBP18.77■□□□□ 0.6
SDCCAG3-211ENST00000486441 AIMP1Q12904 312 aaKnown RBP18.77■□□□□ 0.6
SDCCAG3-211ENST00000486441 ZNF428Q96B54 188 aa18.77■□□□□ 0.6
SDCCAG3-211ENST00000486441 TRMT112Q9UI30 125 aaKnown RBP18.77■□□□□ 0.6
SDCCAG3-211ENST00000486441 ANKRD36CQ5JPF3 1778 aa18.77■□□□□ 0.6
SDCCAG3-211ENST00000486441 MAPK8IP3Q9UPT6 1336 aa18.76■□□□□ 0.59
SDCCAG3-211ENST00000486441 CASP8AP2Q9UKL3 1982 aa18.76■□□□□ 0.59
SDCCAG3-211ENST00000486441 CHL1O00533 1208 aa18.76■□□□□ 0.59
SDCCAG3-211ENST00000486441 EGFRP00533 1210 aa18.76■□□□□ 0.59
SDCCAG3-211ENST00000486441 HSP90AB3PQ58FF7 597 aa18.76■□□□□ 0.59
SDCCAG3-211ENST00000486441 KCNQ5Q9NR82 932 aa18.76■□□□□ 0.59
SDCCAG3-211ENST00000486441 ZBTB12Q9Y330 459 aaPredicted RBP18.76■□□□□ 0.59
SDCCAG3-211ENST00000486441 TNRC18O15417 2968 aaPredicted RBP18.76■□□□□ 0.59
SDCCAG3-211ENST00000486441 SH3TC1Q8TE82 1336 aa18.75■□□□□ 0.59
SDCCAG3-211ENST00000486441 SLC34A2O95436 690 aa18.75■□□□□ 0.59
SDCCAG3-211ENST00000486441 TNIP1Q15025 636 aa18.75■□□□□ 0.59
SDCCAG3-211ENST00000486441 DDX46Q7L014 1031 aaKnown RBP18.75■□□□□ 0.59
SDCCAG3-211ENST00000486441 CDC37L1Q7L3B6 337 aa18.75■□□□□ 0.59
SDCCAG3-211ENST00000486441 ISCA1Q9BUE6 129 aa18.75■□□□□ 0.59
SDCCAG3-211ENST00000486441 BEGAINQ9BUH8 593 aa18.75■□□□□ 0.59
SDCCAG3-211ENST00000486441 TMX4Q9H1E5 349 aaPredicted RBP18.75■□□□□ 0.59
SDCCAG3-211ENST00000486441 PNNQ9H307 717 aaKnown RBP18.75■□□□□ 0.59
SDCCAG3-211ENST00000486441 CCDC85CA6NKD9 419 aa18.74■□□□□ 0.59
SDCCAG3-211ENST00000486441 BRPF1P55201 1214 aaPredicted RBP18.74■□□□□ 0.59
SDCCAG3-211ENST00000486441 USP48Q86UV5 1035 aa18.74■□□□□ 0.59
SDCCAG3-211ENST00000486441 CELF1Q92879 486 aaKnown RBP18.74■□□□□ 0.59
SDCCAG3-211ENST00000486441 BCL2L13Q9BXK5 485 aa18.74■□□□□ 0.59
SDCCAG3-211ENST00000486441 MCOLN1Q9GZU1 580 aa18.74■□□□□ 0.59
SDCCAG3-211ENST00000486441 POLLQ9UGP5 575 aa18.74■□□□□ 0.59
SDCCAG3-211ENST00000486441 PSMD14O00487 310 aa18.73■□□□□ 0.59
SDCCAG3-211ENST00000486441 SF3B3Q15393 1217 aaKnown RBP18.73■□□□□ 0.59
SDCCAG3-211ENST00000486441 SAMD7Q7Z3H4 446 aa18.73■□□□□ 0.59
SDCCAG3-211ENST00000486441 MICALL2Q8IY33 904 aa18.73■□□□□ 0.59
SDCCAG3-211ENST00000486441 DPF2Q92785 391 aa18.73■□□□□ 0.59
SDCCAG3-211ENST00000486441 TRIM35Q9UPQ4 493 aa18.73■□□□□ 0.59
SDCCAG3-211ENST00000486441 POLR2AP24928 1970 aaKnown RBP18.72■□□□□ 0.59
SDCCAG3-211ENST00000486441 FAM155AB1AL88 458 aaPredicted RBP18.72■□□□□ 0.59
SDCCAG3-211ENST00000486441 CHPF2Q9P2E5 772 aa18.72■□□□□ 0.59
SDCCAG3-211ENST00000486441 PDE4DIPQ5VU43 2346 aa18.72■□□□□ 0.59
SDCCAG3-211ENST00000486441 LRRC37AA6NMS7 1700 aa18.71■□□□□ 0.59
SDCCAG3-211ENST00000486441 RTL9Q8NET4 1388 aa18.71■□□□□ 0.59
SDCCAG3-211ENST00000486441 FAM89AQ96GI7 184 aa18.71■□□□□ 0.59
SDCCAG3-211ENST00000486441 ZNF408Q9H9D4 720 aa18.71■□□□□ 0.59
SDCCAG3-211ENST00000486441 CA12O43570 354 aa18.7■□□□□ 0.58
SDCCAG3-211ENST00000486441 GPSM2P81274 684 aa18.7■□□□□ 0.58
SDCCAG3-211ENST00000486441 WASHC4Q2M389 1173 aa18.7■□□□□ 0.58
SDCCAG3-211ENST00000486441 TMC4Q7Z404 712 aa18.7■□□□□ 0.58
SDCCAG3-211ENST00000486441 DDX60Q8IY21 1712 aaKnown RBP18.7■□□□□ 0.58
SDCCAG3-211ENST00000486441 PLBD2Q8NHP8 589 aa18.7■□□□□ 0.58
SDCCAG3-211ENST00000486441 DBNDD1Q9H9R9 158 aa18.7■□□□□ 0.58
SDCCAG3-211ENST00000486441 ATP5J2-PTCD1G3V325 749 aa18.69■□□□□ 0.58
SDCCAG3-211ENST00000486441 H7C1D1 291 aa18.69■□□□□ 0.58
SDCCAG3-211ENST00000486441 HUNKP57058 714 aa18.69■□□□□ 0.58
SDCCAG3-211ENST00000486441 MLLT1Q03111 559 aaPredicted RBP18.69■□□□□ 0.58
SDCCAG3-211ENST00000486441 TBC1D10BQ4KMP7 808 aaPredicted RBP18.69■□□□□ 0.58
SDCCAG3-211ENST00000486441 ANKRD13DQ6ZTN6 518 aa18.69■□□□□ 0.58
SDCCAG3-211ENST00000486441 NSFL1CQ9UNZ2 370 aaKnown RBP18.69■□□□□ 0.58
SDCCAG3-211ENST00000486441 RIMBP2O15034 1052 aa18.68■□□□□ 0.58
SDCCAG3-211ENST00000486441 TRIM28Q13263 835 aaKnown RBP18.68■□□□□ 0.58
SDCCAG3-211ENST00000486441 NOGQ13253 232 aa18.67■□□□□ 0.58
SDCCAG3-211ENST00000486441 CCDC146Q8IYE0 955 aa18.67■□□□□ 0.58
SDCCAG3-211ENST00000486441 TBC1D16Q8TBP0 767 aa18.67■□□□□ 0.58
SDCCAG3-211ENST00000486441 SCN9AQ15858 1988 aa18.66■□□□□ 0.58
SDCCAG3-211ENST00000486441 ADM5C9JUS6 153 aa18.66■□□□□ 0.58
SDCCAG3-211ENST00000486441 NEUROD2Q15784 382 aa18.66■□□□□ 0.58
SDCCAG3-211ENST00000486441 DOK7Q18PE1 504 aa18.66■□□□□ 0.58
SDCCAG3-211ENST00000486441 KRT26Q7Z3Y9 468 aa18.66■□□□□ 0.58
SDCCAG3-211ENST00000486441 ASTN2O75129 1339 aaPredicted RBP18.66■□□□□ 0.58
SDCCAG3-211ENST00000486441 ECE2O60344 883 aa18.65■□□□□ 0.58
SDCCAG3-211ENST00000486441 VIL1P09327 827 aaKnown RBP18.65■□□□□ 0.58
SDCCAG3-211ENST00000486441 LMOD3Q0VAK6 560 aa18.65■□□□□ 0.58
SDCCAG3-211ENST00000486441 RALBP1Q15311 655 aa18.65■□□□□ 0.58
SDCCAG3-211ENST00000486441 RTL5Q5HYW3 569 aaPredicted RBP18.65■□□□□ 0.58
SDCCAG3-211ENST00000486441 RGMBQ6NW40 437 aa18.65■□□□□ 0.58
SDCCAG3-211ENST00000486441 C6orf229H3BNL8 230 aa18.64■□□□□ 0.57
SDCCAG3-211ENST00000486441 HOXB7P09629 217 aa18.64■□□□□ 0.57
SDCCAG3-211ENST00000486441 RPS12P25398 132 aaKnown RBP18.64■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 61.5 ms