RNA–Protein interactions for RNA: ENST00000486254.3

PKP4-213, Transcript of plakophilin 4, humanhuman

TSL 2

Gene PKP4, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP4-213ENST00000486254 MYH14Q7Z406 1995 aaKnown RBP14.45□□□□□ -0.1
PKP4-213ENST00000486254 ZNF34Q8IZ26 560 aa14.45□□□□□ -0.1
PKP4-213ENST00000486254 SYTL4Q96C24 671 aaPredicted RBP14.45□□□□□ -0.1
PKP4-213ENST00000486254 AKAP2Q9Y2D5 859 aa14.45□□□□□ -0.1
PKP4-213ENST00000486254 NUTM2BA6NNL0 878 aaPredicted RBP14.44□□□□□ -0.1
PKP4-213ENST00000486254 NUTM2EB1AL46 878 aaPredicted RBP14.44□□□□□ -0.1
PKP4-213ENST00000486254 MCM4P33991 863 aa14.44□□□□□ -0.1
PKP4-213ENST00000486254 NUCB2P80303 420 aa14.44□□□□□ -0.1
PKP4-213ENST00000486254 PARP10Q53GL7 1025 aa14.44□□□□□ -0.1
PKP4-213ENST00000486254 INTS5Q6P9B9 1019 aaKnown RBP14.44□□□□□ -0.1
PKP4-213ENST00000486254 CWC27Q6UX04 472 aaKnown RBP14.44□□□□□ -0.1
PKP4-213ENST00000486254 DZIP3Q86Y13 1208 aaKnown RBP14.44□□□□□ -0.1
PKP4-213ENST00000486254 NUTM2AQ8IVF1 878 aaPredicted RBP14.44□□□□□ -0.1
PKP4-213ENST00000486254 PALD1Q9ULE6 856 aa14.44□□□□□ -0.1
PKP4-213ENST00000486254 RTL9Q8NET4 1388 aa14.44□□□□□ -0.1
PKP4-213ENST00000486254 MAP4K4O95819 1239 aaPredicted RBP14.43□□□□□ -0.1
PKP4-213ENST00000486254 NEK4P51957 841 aa14.43□□□□□ -0.1
PKP4-213ENST00000486254 JARID2Q92833 1246 aaPredicted RBP14.43□□□□□ -0.1
PKP4-213ENST00000486254 GBP4Q96PP9 640 aa14.43□□□□□ -0.1
PKP4-213ENST00000486254 FSD1Q9BTV5 496 aa14.43□□□□□ -0.1
PKP4-213ENST00000486254 CRKLP46109 303 aaKnown RBP14.43□□□□□ -0.1
PKP4-213ENST00000486254 CTSWP56202 376 aa14.43□□□□□ -0.1
PKP4-213ENST00000486254 IFIT5Q13325 482 aaKnown RBP14.43□□□□□ -0.1
PKP4-213ENST00000486254 HLFQ16534 295 aa14.43□□□□□ -0.1
PKP4-213ENST00000486254 MAP4K1Q92918 833 aa14.43□□□□□ -0.1
PKP4-213ENST00000486254 DBNDD2Q9BQY9 259 aa14.43□□□□□ -0.1
PKP4-213ENST00000486254 BOLA2Q9H3K6 86 aa14.43□□□□□ -0.1
PKP4-213ENST00000486254 HMG20BQ9P0W2 317 aa14.43□□□□□ -0.1
PKP4-213ENST00000486254 CHMP3Q9Y3E7 222 aa14.43□□□□□ -0.1
PKP4-213ENST00000486254 ARAP2Q8WZ64 1704 aa14.42□□□□□ -0.1
PKP4-213ENST00000486254 SCN7AQ01118 1682 aa14.42□□□□□ -0.1
PKP4-213ENST00000486254 SH3TC1Q8TE82 1336 aa14.42□□□□□ -0.1
PKP4-213ENST00000486254 PDE8AO60658 829 aa14.42□□□□□ -0.1
PKP4-213ENST00000486254 CYP2E1P05181 493 aaPredicted RBP14.42□□□□□ -0.1
PKP4-213ENST00000486254 NECTIN1Q15223 517 aa14.42□□□□□ -0.1
PKP4-213ENST00000486254 TSGA10IPQ3SY00 556 aa14.42□□□□□ -0.1
PKP4-213ENST00000486254 KBTBD3Q8NAB2 608 aa14.42□□□□□ -0.1
PKP4-213ENST00000486254 CEP126Q9P2H0 1117 aa14.42□□□□□ -0.1
PKP4-213ENST00000486254 SNX14Q9Y5W7 946 aa14.42□□□□□ -0.1
PKP4-213ENST00000486254 RIC1Q4ADV7 1423 aa14.41□□□□□ -0.1
PKP4-213ENST00000486254 CNTNAP4Q9C0A0 1308 aa14.41□□□□□ -0.1
PKP4-213ENST00000486254 ATP6V1AP38606 617 aa14.41□□□□□ -0.1
PKP4-213ENST00000486254 NMIQ13287 307 aaPredicted RBP14.41□□□□□ -0.1
PKP4-213ENST00000486254 CLEC4GQ6UXB4 293 aa14.41□□□□□ -0.1
PKP4-213ENST00000486254 TTLL11Q8NHH1 800 aa14.41□□□□□ -0.1
PKP4-213ENST00000486254 ZNF512BQ96KM6 892 aaPredicted RBP14.41□□□□□ -0.1
PKP4-213ENST00000486254 TTC14Q96N46 770 aa14.41□□□□□ -0.1
PKP4-213ENST00000486254 ZNF330Q9Y3S2 320 aaPredicted RBP14.41□□□□□ -0.1
PKP4-213ENST00000486254 CCDC9Q9Y3X0 531 aaKnown RBP14.41□□□□□ -0.1
PKP4-213ENST00000486254 RPAP1Q9BWH6 1393 aaPredicted RBP14.41□□□□□ -0.1
PKP4-213ENST00000486254 UBN2Q6ZU65 1347 aa14.4□□□□□ -0.1
PKP4-213ENST00000486254 CAMTA2O94983 1202 aa14.4□□□□□ -0.1
PKP4-213ENST00000486254 ZKSCAN1P17029 563 aaPredicted RBP14.4□□□□□ -0.1
PKP4-213ENST00000486254 LRRFIP1Q32MZ4 808 aaKnown RBP14.4□□□□□ -0.1
PKP4-213ENST00000486254 RNF20Q5VTR2 975 aa14.4□□□□□ -0.1
PKP4-213ENST00000486254 USPL1Q5W0Q7 1092 aa14.4□□□□□ -0.1
PKP4-213ENST00000486254 SPRYD3Q8NCJ5 442 aa14.4□□□□□ -0.1
PKP4-213ENST00000486254 FAM89AQ96GI7 184 aa14.4□□□□□ -0.1
PKP4-213ENST00000486254 NGLY1Q96IV0 654 aa14.4□□□□□ -0.1
PKP4-213ENST00000486254 TMX3Q96JJ7 454 aa14.4□□□□□ -0.1
PKP4-213ENST00000486254 BTAF1O14981 1849 aa14.39□□□□□ -0.11
PKP4-213ENST00000486254 A0A1B0GUL7 405 aa14.39□□□□□ -0.11
PKP4-213ENST00000486254 IRS4O14654 1257 aaPredicted RBP14.39□□□□□ -0.11
PKP4-213ENST00000486254 ITPK1Q13572 414 aa14.39□□□□□ -0.11
PKP4-213ENST00000486254 GSE1Q14687 1217 aa14.39□□□□□ -0.11
PKP4-213ENST00000486254 LRRC24Q50LG9 513 aa14.39□□□□□ -0.11
PKP4-213ENST00000486254 TNPO1Q92973 898 aaKnown RBP14.39□□□□□ -0.11
PKP4-213ENST00000486254 TRMT112Q9UI30 125 aaKnown RBP14.39□□□□□ -0.11
PKP4-213ENST00000486254 ZNF652Q9Y2D9 606 aa14.39□□□□□ -0.11
PKP4-213ENST00000486254 DDX60Q8IY21 1712 aaKnown RBP14.39□□□□□ -0.11
PKP4-213ENST00000486254 A0A0D9SFI3 127 aa14.39□□□□□ -0.11
PKP4-213ENST00000486254 ANKRD18BA2A2Z9 1011 aa14.39□□□□□ -0.11
PKP4-213ENST00000486254 DEKP35659 375 aaKnown RBP14.39□□□□□ -0.11
PKP4-213ENST00000486254 VPS53Q5VIR6 699 aa14.39□□□□□ -0.11
PKP4-213ENST00000486254 C8orf37Q96NL8 207 aa14.39□□□□□ -0.11
PKP4-213ENST00000486254 ALDH8A1Q9H2A2 487 aaPredicted RBP14.39□□□□□ -0.11
PKP4-213ENST00000486254 ZSWIM6Q9HCJ5 1215 aa14.39□□□□□ -0.11
PKP4-213ENST00000486254 RIPOR2Q9Y4F9 1068 aa14.39□□□□□ -0.11
PKP4-213ENST00000486254 LY75O60449 1722 aa14.38□□□□□ -0.11
PKP4-213ENST00000486254 PSMA5P28066 241 aa14.38□□□□□ -0.11
PKP4-213ENST00000486254 PTH1RQ03431 593 aa14.38□□□□□ -0.11
PKP4-213ENST00000486254 FAM98CQ17RN3 349 aaKnown RBP14.38□□□□□ -0.11
PKP4-213ENST00000486254 RC3H1Q5TC82 1133 aaKnown RBP14.38□□□□□ -0.11
PKP4-213ENST00000486254 FAM227BQ96M60 508 aa14.38□□□□□ -0.11
PKP4-213ENST00000486254 HELLSQ9NRZ9 838 aa14.38□□□□□ -0.11
PKP4-213ENST00000486254 RBM8AQ9Y5S9 174 aaKnown RBP14.38□□□□□ -0.11
PKP4-213ENST00000486254 MYH7P12883 1935 aa14.37□□□□□ -0.11
PKP4-213ENST00000486254 TAF5LO75529 589 aa14.37□□□□□ -0.11
PKP4-213ENST00000486254 ITGA6P23229 1130 aa14.37□□□□□ -0.11
PKP4-213ENST00000486254 KRT32Q14532 448 aa14.37□□□□□ -0.11
PKP4-213ENST00000486254 TAF7LQ5H9L4 462 aa14.37□□□□□ -0.11
PKP4-213ENST00000486254 CCDC158Q5M9N0 1113 aa14.37□□□□□ -0.11
PKP4-213ENST00000486254 RASEFQ8IZ41 740 aa14.37□□□□□ -0.11
PKP4-213ENST00000486254 ACSBG1Q96GR2 724 aa14.37□□□□□ -0.11
PKP4-213ENST00000486254 PAG1Q9NWQ8 432 aa14.37□□□□□ -0.11
PKP4-213ENST00000486254 COL24A1Q17RW2 1714 aa14.37□□□□□ -0.11
PKP4-213ENST00000486254 ATRNO75882 1429 aa14.36□□□□□ -0.11
PKP4-213ENST00000486254 ZFYP08048 801 aaPredicted RBP14.36□□□□□ -0.11
PKP4-213ENST00000486254 PDIA4P13667 645 aaKnown RBP14.36□□□□□ -0.11
PKP4-213ENST00000486254 GPTP24298 496 aa14.36□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms