RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 RTFDC1Q9BY42 306 aaPredicted RBP13.18□□□□□ -0.3
SND1-213ENST00000486037 NUP98P52948 1817 aa13.18□□□□□ -0.3
SND1-213ENST00000486037 ASTN2O75129 1339 aaPredicted RBP13.17□□□□□ -0.3
SND1-213ENST00000486037 RGL2O15211 777 aa13.17□□□□□ -0.3
SND1-213ENST00000486037 GPTP24298 496 aa13.17□□□□□ -0.3
SND1-213ENST00000486037 ATP6V0A2Q9Y487 856 aa13.17□□□□□ -0.3
SND1-213ENST00000486037 COL6A3P12111 3177 aa13.17□□□□□ -0.3
SND1-213ENST00000486037 ABCC4O15439 1325 aa13.16□□□□□ -0.3
SND1-213ENST00000486037 POTEFA5A3E0 1075 aa13.16□□□□□ -0.3
SND1-213ENST00000486037 DIAPH1O60610 1272 aaKnown RBP13.16□□□□□ -0.3
SND1-213ENST00000486037 SNRPA1P09661 255 aaKnown RBP13.16□□□□□ -0.3
SND1-213ENST00000486037 KIAA2012Q0VF49 1180 aa13.16□□□□□ -0.3
SND1-213ENST00000486037 PKN2Q16513 984 aaKnown RBP13.16□□□□□ -0.3
SND1-213ENST00000486037 NGEFQ8N5V2 710 aa13.16□□□□□ -0.3
SND1-213ENST00000486037 NYXQ9GZU5 481 aa13.16□□□□□ -0.3
SND1-213ENST00000486037 VPS33BQ9H267 617 aa13.16□□□□□ -0.3
SND1-213ENST00000486037 HDAC9Q9UKV0 1011 aa13.16□□□□□ -0.3
SND1-213ENST00000486037 DUOX1Q9NRD9 1551 aa13.15□□□□□ -0.3
SND1-213ENST00000486037 NTSR2O95665 410 aa13.15□□□□□ -0.3
SND1-213ENST00000486037 AMER1Q5JTC6 1135 aaPredicted RBP13.15□□□□□ -0.3
SND1-213ENST00000486037 TTLL7Q6ZT98 887 aa13.15□□□□□ -0.3
SND1-213ENST00000486037 GAS2L2Q8NHY3 880 aa13.15□□□□□ -0.3
SND1-213ENST00000486037 COL3A1P02461 1466 aaPredicted RBP13.15□□□□□ -0.3
SND1-213ENST00000486037 RANBP2P49792 3224 aaKnown RBP13.14□□□□□ -0.31
SND1-213ENST00000486037 H7C1D1 291 aa13.14□□□□□ -0.31
SND1-213ENST00000486037 PSMD14O00487 310 aa13.14□□□□□ -0.31
SND1-213ENST00000486037 TNIP1Q15025 636 aa13.14□□□□□ -0.31
SND1-213ENST00000486037 RBM26Q5T8P6 1007 aaKnown RBP13.14□□□□□ -0.31
SND1-213ENST00000486037 DIEXFQ68CQ4 756 aaKnown RBP13.14□□□□□ -0.31
SND1-213ENST00000486037 FBXO46Q6PJ61 603 aaPredicted RBP13.14□□□□□ -0.31
SND1-213ENST00000486037 PHACTR3Q96KR7 559 aa13.14□□□□□ -0.31
SND1-213ENST00000486037 R3HDMLQ9H3Y0 253 aa13.14□□□□□ -0.31
SND1-213ENST00000486037 IBTKQ9P2D0 1353 aaPredicted RBP13.13□□□□□ -0.31
SND1-213ENST00000486037 DPP8Q6V1X1 898 aaPredicted RBP13.13□□□□□ -0.31
SND1-213ENST00000486037 MOB2Q70IA6 237 aa13.13□□□□□ -0.31
SND1-213ENST00000486037 CNKSR2Q8WXI2 1034 aa13.13□□□□□ -0.31
SND1-213ENST00000486037 KCNQ5Q9NR82 932 aa13.13□□□□□ -0.31
SND1-213ENST00000486037 COLQQ9Y215 455 aaPredicted RBP13.13□□□□□ -0.31
SND1-213ENST00000486037 MAP3K15Q6ZN16 1313 aa13.13□□□□□ -0.31
SND1-213ENST00000486037 GPR25O00155 361 aa13.12□□□□□ -0.31
SND1-213ENST00000486037 MCM10Q7L590 875 aa13.12□□□□□ -0.31
SND1-213ENST00000486037 MPNDQ8N594 471 aa13.12□□□□□ -0.31
SND1-213ENST00000486037 SUPT20HQ8NEM7 779 aa13.12□□□□□ -0.31
SND1-213ENST00000486037 CDCA5Q96FF9 252 aa13.12□□□□□ -0.31
SND1-213ENST00000486037 ZBTB3Q9H5J0 574 aa13.12□□□□□ -0.31
SND1-213ENST00000486037 GGA3Q9NZ52 723 aa13.12□□□□□ -0.31
SND1-213ENST00000486037 TAF1P21675 1872 aa13.12□□□□□ -0.31
SND1-213ENST00000486037 PAPPA2Q9BXP8 1791 aa13.12□□□□□ -0.31
SND1-213ENST00000486037 TRIOBPQ9H2D6 2365 aa13.12□□□□□ -0.31
SND1-213ENST00000486037 ERVV-1B6SEH8 477 aa13.11□□□□□ -0.31
SND1-213ENST00000486037 DLL1O00548 723 aa13.11□□□□□ -0.31
SND1-213ENST00000486037 U2SURPO15042 1029 aaKnown RBP13.11□□□□□ -0.31
SND1-213ENST00000486037 ZBTB22O15209 634 aa13.11□□□□□ -0.31
SND1-213ENST00000486037 ZNF34Q8IZ26 560 aa13.11□□□□□ -0.31
SND1-213ENST00000486037 DPF2Q92785 391 aa13.11□□□□□ -0.31
SND1-213ENST00000486037 DCPSQ96C86 337 aaKnown RBP13.11□□□□□ -0.31
SND1-213ENST00000486037 KNSTRNQ9Y448 316 aa13.11□□□□□ -0.31
SND1-213ENST00000486037 LAMB2P55268 1798 aa13.11□□□□□ -0.31
SND1-213ENST00000486037 RTL9Q8NET4 1388 aa13.1□□□□□ -0.31
SND1-213ENST00000486037 LAMB4A4D0S4 1761 aa13.1□□□□□ -0.31
SND1-213ENST00000486037 DDX10Q13206 875 aaKnown RBP13.1□□□□□ -0.31
SND1-213ENST00000486037 DCTN1Q14203 1278 aa13.1□□□□□ -0.31
SND1-213ENST00000486037 SP8Q8IXZ3 490 aa13.1□□□□□ -0.31
SND1-213ENST00000486037 DBNDD1Q9H9R9 158 aa13.1□□□□□ -0.31
SND1-213ENST00000486037 SCAF8Q9UPN6 1271 aaKnown RBP13.1□□□□□ -0.31
SND1-213ENST00000486037 KIAA0100Q14667 2235 aaKnown RBP13.1□□□□□ -0.31
SND1-213ENST00000486037 MKRN3Q13064 507 aaKnown RBP13.09□□□□□ -0.31
SND1-213ENST00000486037 KIF4BQ2VIQ3 1234 aa13.09□□□□□ -0.31
SND1-213ENST00000486037 MIS18AQ9NYP9 233 aa13.09□□□□□ -0.31
SND1-213ENST00000486037 COL4A1P02462 1669 aa13.08□□□□□ -0.31
SND1-213ENST00000486037 EN2P19622 333 aaPredicted RBP13.08□□□□□ -0.32
SND1-213ENST00000486037 REM2Q8IYK8 340 aaPredicted RBP13.08□□□□□ -0.32
SND1-213ENST00000486037 NLRP3Q96P20 1036 aa13.08□□□□□ -0.32
SND1-213ENST00000486037 TMX4Q9H1E5 349 aaPredicted RBP13.08□□□□□ -0.32
SND1-213ENST00000486037 SCN9AQ15858 1988 aa13.07□□□□□ -0.32
SND1-213ENST00000486037 UBE2Q2LH0YL09 131 aa13.07□□□□□ -0.32
SND1-213ENST00000486037 MYL6BP14649 208 aa13.07□□□□□ -0.32
SND1-213ENST00000486037 PRKAR2BP31323 418 aa13.07□□□□□ -0.32
SND1-213ENST00000486037 SULF1Q8IWU6 871 aa13.07□□□□□ -0.32
SND1-213ENST00000486037 RRP7AQ9Y3A4 280 aaKnown RBP13.07□□□□□ -0.32
SND1-213ENST00000486037 RBBP6Q7Z6E9 1792 aaKnown RBP13.07□□□□□ -0.32
SND1-213ENST00000486037 LRRC37AA6NMS7 1700 aa13.06□□□□□ -0.32
SND1-213ENST00000486037 RIMBP2O15034 1052 aa13.06□□□□□ -0.32
SND1-213ENST00000486037 FKTNO75072 461 aa13.06□□□□□ -0.32
SND1-213ENST00000486037 BBOX1O75936 387 aa13.06□□□□□ -0.32
SND1-213ENST00000486037 TM4SF4P48230 202 aa13.06□□□□□ -0.32
SND1-213ENST00000486037 NOM1Q5C9Z4 860 aaKnown RBP13.06□□□□□ -0.32
SND1-213ENST00000486037 SLC10A5Q5PT55 438 aa13.06□□□□□ -0.32
SND1-213ENST00000486037 ANGEL2Q5VTE6 544 aaKnown RBP13.06□□□□□ -0.32
SND1-213ENST00000486037 PRAMEF18Q5VWM3 479 aa13.06□□□□□ -0.32
SND1-213ENST00000486037 KIF6Q6ZMV9 814 aa13.06□□□□□ -0.32
SND1-213ENST00000486037 RSPH6AQ9H0K4 717 aa13.06□□□□□ -0.32
SND1-213ENST00000486037 LAMA3Q16787 3333 aa13.06□□□□□ -0.32
SND1-213ENST00000486037 CEP290O15078 2479 aa13.05□□□□□ -0.32
SND1-213ENST00000486037 ANKRD36CQ5JPF3 1778 aa13.05□□□□□ -0.32
SND1-213ENST00000486037 HCLS1P14317 486 aaPredicted RBP13.05□□□□□ -0.32
SND1-213ENST00000486037 DOK7Q18PE1 504 aa13.05□□□□□ -0.32
SND1-213ENST00000486037 CC2D1BQ5T0F9 858 aaKnown RBP13.05□□□□□ -0.32
SND1-213ENST00000486037 GIGYF2Q6Y7W6 1299 aaKnown RBP13.05□□□□□ -0.32
SND1-213ENST00000486037 ECE2O60344 883 aa13.04□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms