RNA–Protein interactions for RNA: ENST00000486022.1

LSMEM1-205, Transcript of leucine rich single-pass membrane protein 1, humanhuman

TSL 3

Gene LSMEM1, Length 604 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSMEM1-205ENST00000486022 PRRT3Q5FWE3 981 aa8.04□□□□□ -1.12
LSMEM1-205ENST00000486022 TREML1Q86YW5 311 aa8.04□□□□□ -1.12
LSMEM1-205ENST00000486022 RTCBQ9Y3I0 505 aaKnown RBP8.04□□□□□ -1.12
LSMEM1-205ENST00000486022 ARID3CA6NKF2 412 aa8.03□□□□□ -1.12
LSMEM1-205ENST00000486022 SPDYE3A6NKU9 549 aa8.03□□□□□ -1.12
LSMEM1-205ENST00000486022 CPB1P15086 417 aa8.03□□□□□ -1.12
LSMEM1-205ENST00000486022 EPB42P16452 691 aa8.03□□□□□ -1.12
LSMEM1-205ENST00000486022 ITGB7P26010 798 aa8.03□□□□□ -1.12
LSMEM1-205ENST00000486022 GATA4P43694 442 aa8.03□□□□□ -1.12
LSMEM1-205ENST00000486022 TMEM164Q5U3C3 297 aa8.03□□□□□ -1.12
LSMEM1-205ENST00000486022 FAM35AQ86V20 835 aa8.03□□□□□ -1.12
LSMEM1-205ENST00000486022 RGL4Q8IZJ4 473 aa8.03□□□□□ -1.12
LSMEM1-205ENST00000486022 MKNK1Q9BUB5 465 aa8.03□□□□□ -1.12
LSMEM1-205ENST00000486022 SLAIN2Q9P270 581 aa8.03□□□□□ -1.12
LSMEM1-205ENST00000486022 ATG7O95352 703 aa8.02□□□□□ -1.13
LSMEM1-205ENST00000486022 MAP3K6O95382 1288 aa8.02□□□□□ -1.13
LSMEM1-205ENST00000486022 NAA30Q147X3 362 aaPredicted RBP8.02□□□□□ -1.13
LSMEM1-205ENST00000486022 HFE2Q6ZVN8 426 aa8.02□□□□□ -1.13
LSMEM1-205ENST00000486022 ILDR2Q71H61 639 aa8.02□□□□□ -1.13
LSMEM1-205ENST00000486022 DHX32Q7L7V1 743 aaKnown RBP8.02□□□□□ -1.13
LSMEM1-205ENST00000486022 ETFBKMTQ8IXQ9 262 aa8.02□□□□□ -1.13
LSMEM1-205ENST00000486022 CMTR1Q8N1G2 835 aaKnown RBP8.02□□□□□ -1.13
LSMEM1-205ENST00000486022 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.02□□□□□ -1.13
LSMEM1-205ENST00000486022 A0A0A0MRY4 1105 aa8.01□□□□□ -1.13
LSMEM1-205ENST00000486022 APBA3O96018 575 aa8.01□□□□□ -1.13
LSMEM1-205ENST00000486022 RARAP10276 462 aa8.01□□□□□ -1.13
LSMEM1-205ENST00000486022 PERM1Q5SV97 790 aa8.01□□□□□ -1.13
LSMEM1-205ENST00000486022 DMRTC2Q8IXT2 367 aaPredicted RBP8.01□□□□□ -1.13
LSMEM1-205ENST00000486022 LPIN3Q9BQK8 851 aa8.01□□□□□ -1.13
LSMEM1-205ENST00000486022 KCNMB2Q9Y691 235 aa8.01□□□□□ -1.13
LSMEM1-205ENST00000486022 XYLBO75191 536 aa8□□□□□ -1.13
LSMEM1-205ENST00000486022 RGS9O75916 674 aaPredicted RBP8□□□□□ -1.13
LSMEM1-205ENST00000486022 GRIK5Q16478 980 aa8□□□□□ -1.13
LSMEM1-205ENST00000486022 TRPM4Q8TD43 1214 aa8□□□□□ -1.13
LSMEM1-205ENST00000486022 CXXC1Q9P0U4 656 aaPredicted RBP8□□□□□ -1.13
LSMEM1-205ENST00000486022 TNFRSF10BO14763 440 aa7.99□□□□□ -1.13
LSMEM1-205ENST00000486022 SELPP16109 830 aa7.99□□□□□ -1.13
LSMEM1-205ENST00000486022 SHISA2Q6UWI4 295 aa7.99□□□□□ -1.13
LSMEM1-205ENST00000486022 SEMA6BQ9H3T3 888 aa7.99□□□□□ -1.13
LSMEM1-205ENST00000486022 J3QW42 95 aa7.98□□□□□ -1.13
LSMEM1-205ENST00000486022 EGFRP00533 1210 aa7.98□□□□□ -1.13
LSMEM1-205ENST00000486022 C16orf46Q6P387 395 aa7.98□□□□□ -1.13
LSMEM1-205ENST00000486022 C11orf16Q9NQ32 467 aa7.98□□□□□ -1.13
LSMEM1-205ENST00000486022 TPSG1Q9NRR2 321 aa7.98□□□□□ -1.13
LSMEM1-205ENST00000486022 GTF3C3Q9Y5Q9 886 aa7.98□□□□□ -1.13
LSMEM1-205ENST00000486022 BRD2P25440 801 aaKnown RBP7.97□□□□□ -1.13
LSMEM1-205ENST00000486022 TRIP4Q15650 581 aaPredicted RBP7.97□□□□□ -1.13
LSMEM1-205ENST00000486022 TLR7Q9NYK1 1049 aaKnown RBP7.97□□□□□ -1.13
LSMEM1-205ENST00000486022 ZBTB39O15060 712 aa7.96□□□□□ -1.14
LSMEM1-205ENST00000486022 MMP20O60882 483 aa7.96□□□□□ -1.14
LSMEM1-205ENST00000486022 GPLD1P80108 840 aa7.96□□□□□ -1.14
LSMEM1-205ENST00000486022 RSPO4Q2I0M5 234 aaPredicted RBP7.96□□□□□ -1.14
LSMEM1-205ENST00000486022 MSL1Q68DK7 614 aa7.96□□□□□ -1.14
LSMEM1-205ENST00000486022 ELMSAN1Q6PJG2 1045 aa7.96□□□□□ -1.14
LSMEM1-205ENST00000486022 FMR1NBQ8N0W7 255 aaPredicted RBP7.96□□□□□ -1.14
LSMEM1-205ENST00000486022 COL26A1Q96A83 441 aa7.96□□□□□ -1.14
LSMEM1-205ENST00000486022 PBXIP1Q96AQ6 731 aa7.96□□□□□ -1.14
LSMEM1-205ENST00000486022 CCDC97Q96F63 343 aaPredicted RBP7.96□□□□□ -1.14
LSMEM1-205ENST00000486022 SMG9Q9H0W8 520 aaKnown RBP7.96□□□□□ -1.14
LSMEM1-205ENST00000486022 ELNP15502 786 aa7.95□□□□□ -1.14
LSMEM1-205ENST00000486022 SCNN1AP37088 669 aa7.95□□□□□ -1.14
LSMEM1-205ENST00000486022 PCSK7Q16549 785 aa7.95□□□□□ -1.14
LSMEM1-205ENST00000486022 NKAPLQ5M9Q1 402 aa7.95□□□□□ -1.14
LSMEM1-205ENST00000486022 CLP1Q92989 425 aaKnown RBP7.95□□□□□ -1.14
LSMEM1-205ENST00000486022 FRRS1LQ9P0K9 344 aa7.95□□□□□ -1.14
LSMEM1-205ENST00000486022 SERPINA10Q9UK55 444 aa7.95□□□□□ -1.14
LSMEM1-205ENST00000486022 LOC102724428A0A0B4J2F2 783 aa7.94□□□□□ -1.14
LSMEM1-205ENST00000486022 NRLP54845 237 aa7.94□□□□□ -1.14
LSMEM1-205ENST00000486022 SIK1P57059 783 aa7.94□□□□□ -1.14
LSMEM1-205ENST00000486022 RAC1P63000 192 aa7.94□□□□□ -1.14
LSMEM1-205ENST00000486022 ADGRE1Q14246 886 aa7.94□□□□□ -1.14
LSMEM1-205ENST00000486022 MBTPS1Q14703 1052 aa7.94□□□□□ -1.14
LSMEM1-205ENST00000486022 NSUN5Q96P11 429 aaKnown RBP7.94□□□□□ -1.14
LSMEM1-205ENST00000486022 NACC1Q96RE7 527 aa7.94□□□□□ -1.14
LSMEM1-205ENST00000486022 SEPT3Q9UH03 358 aa7.94□□□□□ -1.14
LSMEM1-205ENST00000486022 C9orf172C9J069 976 aa7.93□□□□□ -1.14
LSMEM1-205ENST00000486022 EIF2AK2P19525 551 aaKnown RBP7.93□□□□□ -1.14
LSMEM1-205ENST00000486022 LENG1Q96BZ8 264 aaPredicted RBP7.93□□□□□ -1.14
LSMEM1-205ENST00000486022 XP32Q5T750 250 aa7.92□□□□□ -1.14
LSMEM1-205ENST00000486022 TTC9Q92623 222 aa7.92□□□□□ -1.14
LSMEM1-205ENST00000486022 UBAP1LF5GYI3 381 aa7.91□□□□□ -1.14
LSMEM1-205ENST00000486022 PTCD1O75127 700 aaKnown RBP7.91□□□□□ -1.14
LSMEM1-205ENST00000486022 PSAPP07602 524 aa7.91□□□□□ -1.14
LSMEM1-205ENST00000486022 ATP2B4P23634 1241 aa7.91□□□□□ -1.14
LSMEM1-205ENST00000486022 ZAP70P43403 619 aa7.91□□□□□ -1.14
LSMEM1-205ENST00000486022 COL13A1Q5TAT6 717 aaPredicted RBP7.91□□□□□ -1.14
LSMEM1-205ENST00000486022 NLRP13Q86W25 1043 aa7.91□□□□□ -1.14
LSMEM1-205ENST00000486022 FBXO11Q86XK2 927 aa7.91□□□□□ -1.14
LSMEM1-205ENST00000486022 WFDC8Q8IUA0 241 aa7.91□□□□□ -1.14
LSMEM1-205ENST00000486022 GPR152Q8TDT2 470 aa7.91□□□□□ -1.14
LSMEM1-205ENST00000486022 PLD4Q96BZ4 506 aa7.91□□□□□ -1.14
LSMEM1-205ENST00000486022 C1orf115Q9H7X2 142 aa7.91□□□□□ -1.14
LSMEM1-205ENST00000486022 STIM2Q9P246 746 aa7.91□□□□□ -1.14
LSMEM1-205ENST00000486022 DEAF1O75398 565 aaPredicted RBP7.9□□□□□ -1.14
LSMEM1-205ENST00000486022 GDF6Q6KF10 455 aaPredicted RBP7.9□□□□□ -1.14
LSMEM1-205ENST00000486022 PIK3R5Q8WYR1 880 aa7.9□□□□□ -1.14
LSMEM1-205ENST00000486022 USP21Q9UK80 565 aa7.9□□□□□ -1.14
LSMEM1-205ENST00000486022 CCDC180Q9P1Z9 1646 aa7.89□□□□□ -1.15
LSMEM1-205ENST00000486022 DYRK3O43781 588 aa7.89□□□□□ -1.15
LSMEM1-205ENST00000486022 TXNRD3Q86VQ6 643 aa7.89□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms